XLOC_039103 (gene) - C. hemisphaerica

Overview
NameXLOC_039103
Unique NameXLOC_039103
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:243017..252225-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039103 ID=XLOC_039103|Name=XLOC_039103|organism=Clytia hemisphaerica|type=gene|length=9209bp|location=Sequence derived from alignment at scaffold_364:243017..252225- (Clytia hemisphaerica)
ATTTTANATTAGAGCGTGGTGCACAAGTAGGTATAAAGAGTGATTATGGT
ACAACTTCACTTGCTTTTGCATGTCGCCGTGGTAATATTGAGTTAGTTGA
CTTGTTGATGGAAAAGAATCCAGGTCTGGTTGATGTTGGAGATAATTCTG
ATGTAAGTATAGAATGGAATGGAGTGTTGTTTTTTTTCTTCGAGAAAAGT
ATTCATACGTGTAAAACAAGAAAAGGTCGTTGCTTCAAGAAAGTCATCTT
TTTCAAAACTCTCGTTCAGAATTAATGAACTATTTTTGGAAGGTTAATGT
CTGTTTAAATTTGAAGCTATTTCAAATCATAAAATAATTATGAAATCTAA
AGTTGGAAGAAAGAATGCCATAAGTCAAAAATGGTTTAACTTTTATCTGG
GATTGTTTAGTCCAAACAGCATTCCATGACCTGTAATAGCTCAATTTTGT
TATATTTCTACATGAATGTCATTTCGTTTTGGACCGTGTCCTTTCGATAA
AGTGGAGCCTTGAACAGAGTAACAACAACACTTTGTCCACATATTCCGAA
GTTGCTTTTCTTTACCACTAGGTGATGCCCTTACACGCCGCCATGATGGG
CGGTAAAGAAGATGTAGTGAAGGCGTTACTGGATATGGGTGCACGAATCG
ATGCAGAGGATAAAGAAGGAGAACAGCCAATCCATTATGCAGCTGCGGAT
AACAATGAAGCGTTGATTGCACTGTTGGCGAAAGAAGGTAAGAATCGGTT
TAATAAATAGCGAAGATGAATGTTGTATACAAAGCTGTTTTTTGGCCACA
TACCTCATCTTATTTTCATAGCCTATTCTCAACTTCAGTTGAGCTAGAAT
CTGACAATGTATGTATGTGTGTGTGCGTATGTCTGTCCGAAAACTTTGGG
GCAGCCTGGAGACTTCAAAAATGATCGGGTTTGGCTGAAATTTGGCACAC
TTGTTCCTTGGGTGAATATCTAGGTGTGTTTTTTTCATTTTCTGAAAATT
TCCATTTTTAAGGGCGTGGTCACGAGTTTTCGCCAAAACGAGGCTAAAAC
TTTGGGGCAGGCTGGAGACTTAAAAAATGATCGGATTTGGTTGAAATTTG
GCACACTTGTTCCTTGGATGAATATCTGGGGGTGTTTTTTTCATTTTTTC
AAAATTTCCATTTTCAAGGGCGTGGTCACGAGTTTTCGCCAAAACGAGGC
TAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGATCGGGTTTGGTTGA
AATTTGGCACACTTGTTCCTTGGGAGAATATCTGGGGGTGCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCCTGT
GGATGGTTTTCATTATTTTATAATTTCCATTTTAAGGGGGTGGTCATGAG
TTTTTAGTTGAAATTGGTTACAATTTTACAATTGGGCCTATGAATGATTT
AAAAACACTGAAGTTGAGCCCAGTGCGGTTAGCACGTTCGACAGTAAAAC
AATCTCTTCGTAAAGGTGTTCTCGCAAATCTGTGAAGGTTAATATCCGAT
CACTTCCCCGTGTGTCTCGAGCTTTATCACGTTAATTGCTGCTAGTGTCT
GAAGCCGCCAGGTAACTTCGAGAAACAAAAATACCTTTCAAATGAAGTTT
TATATACCTATTTATTTTGAAATCTTCCGTGATTCCAGTTGCCAGTAAAT
ACGACCAACCAGAGGAAGGGACGTTCGCCAAGAGACGTTTGGTCAATTCA
CAGACACGTGAATGCGACACACCATTGCATATTGCTGCGCAAGGTGGTTA
TGAAGAAGTTGCCAAGACGTTGATCGCTCTTGGTGCAGATGTCAATGCTA
GAACTGATACCAATCAAACACCATTACATCTTGCCAGCATTGCTGGACAT
TTGAGTATCTTGAAACTACTCATTATGTATAAATCGAAAATCAATGCTAA
AGATTTGGACCAGCAAACAGCTTTGCATGTGTTAGTCATTTCTTTGATTT
CTAACTGTTCTTTTTCTGCTCAATTATTTTCTCTTTACCGATTTTTCATT
ACATGTCTAGGTGAGATAACGTTCTACTGAAATCTATCTCCAGATCTCTC
GTTAGAGTTGAGGCGGTGTTTTGTCCCAGAGAGGGTCTTCATTAAGAATA
ATAGACATTTTTTTGATTTTAATAGACAATTTTTCTCTTCCTATCTCTCA
CTGGGGCATCAACATTGTCTAAACTAAACCCTTTGAAACATCAATCAAAC
AAACCAATCAAATCATTCATGTTTTAGGGCAGCACAGTTCGGTCGTTTGG
AAGTTTGCAAGCAGCTCTTAGAATTTGGTGCACGCTTAGATTGTAATGAT
AAAGATAATTTCACTCCGCTTATGTTGGCCGTATGGAAGGGTCAAGATGA
AATTGTTCAATTTCTAATCGATAAAGGTATGTGTGTACAATCTTCACTTC
ATGATTAGATGGCCATCTTGCAATACAGGGAGGACACACCGGATACGATG
ACTAGTATTGTGTGTGTACAATCTTCACTTCATGACTAGATGGCCATCTT
GCAATACAGGGAGGACACACCGGATACAGGGAGGACACACCGGATACAGG
GAGGACACACCGGATACGGTGAATAGTATAGTGTTCAAATCCTCAGGGTA
TAAACGTCATTGTGTTGCAGCGTGAAATGAAAGTATTCAATTATAGAATC
TTGGAGATTATGAAAAGCTCTGTATTCGAACCAGAAAAGTTGATCGTCTA
GGCTAGAGGTGTATTCAAACTTTACTTTAAAGACCATTCTGAACCATGAC
ATTATATTACTTTGGTATTTGTAAGCAAGATTCTGCGAATAGCTTACCGC
AGTACTTTGGACTGTAGGATCGCTATTCTCCCAGTCTTGTTTGAGGGTCA
ATGTATTCGTTATGACTCGGCAGCTCGAATCTGTAGAGGTGCAATATTTT
GGTGTGTAGTGATTCCTATCCTCCGTATGTAGGACCATAGGATATCTTAT
ATAAACACTAGCTAGAGCTACTCTGTATTTCCCGAGCAACGACAGGTGAA
GCAAAATGATGCGCCATTTTTCCTAAAAGTAGGTCGCAGTGGGTCCCAGT
TCGGTACCGACTATTTGTTCAACCAAGCAAAAAACCTGAATGGCGCGAAG
AGACAAGGCGAAAGATAGGCTTGATCGATCAAATTGTCGGCACCAAACTA
TGGTCTACTTCAAATCAAAGATGGCTTATTGTTTTAATTCAAATAGGGAT
AGAGTAGCTCTAGTGTTTTATATAAGATATATGTGGAGGGGAGCCATTTT
GAGATACCTTATCGGTGGGATTACTATTTTATCGGGTGTCCTAAAGTTAC
CCTCTATAAAGTGAAATCTTTCGATTCTAAAATAAGACTTATCCTATTGA
ATATAAATAATTTTGTAGGTAGAGCAAAGCATAGTTTCTAGAGGGGTCAA
GACCCCCCCCCTTAGGTAAGAGGACCCCCCCCCCCTTAAGTGCTAACCCC
TCCTTAGGAAATTCATCTAAAATTTCACACCCTCCCCTTAGAAAATCAGT
ATAAATGAAACAATTGTACAGGAGTCATAATTCAAGGAAGATCCCCCTTA
TCTAAGAAGACCCCCCTTAGGTAAGAAGACCCCCCCCCTTAACTGGCAAC
CCCCCTTAGGAAAGTCATACTTTTAACACCCCCTTGCTTTTGGTTCATCA
AAACCCAAGACCCCCCCTAAATGTAGGGGGGTTGAAACTATGAAAAGGTA
AAGTTGAACTTTGATTGGTCCCTTTACAAATTTGGTTCATTAGAGTCAAG
CAATAATTAAAACCAATAATTATTTTTCTAAGATTGCTAAAAAACCTTAT
GTAGTTATCTCTAGTATTCTATCTTCACTTTTATTTGCAGGTGCAAGTGT
GTACGTCAAAGACCTGGGCGATAAAAACGTTCTTCACTTAGCCATCGAAG
AAGATAATGACGATACACTAATCCTTTTGTTTAACACACCTGCTAAACGA
CTCATCAATGCACCTGACAAAGAGTTCAAAACACCTCTTCACTACGCTGC
TAAAGTGGGAAATATTGAGGTATGGGGCCTAGGAAAAGAGAAACCTAACT
TGTTTTCGTAAGAATTTGTTATTCACGATGATATACAGTGGGATTTTCGT
AAGTCGAGGAACACGCACGAGGAACGTTAAATTTGTTAAAGCTAGATAAT
ATTCTCGAGCTATTGAGACTGGATGCTAAGGGTTTCTTCAAAGAAAGAAC
AAGGATACATTCGAGCTGATGTAATGTTATGTTATGCGCTCTTTGGACAG
ACCTTAAGACGTTTTTTTCAGTTAGTTTCATATTATAGTTCTGTTTTTTG
ATTTTAACTTTCAAAATCAATGAAATTAACGAGATTTTTTCTAGGAAACT
CTACTTTGATATTTCAAAATACTTGTGGAGATATTTCTTCCAAATCGTTG
TATGATGAAACAGAGGCGTTTACACAGGTTAACATTCTACCCGGTATTAA
TAAACGGGCCTCAATAATCCAGATCAAGATATTAAGGTTTTACTGCTCGA
ATTTATAGGCCATTGAAATGTTGTTGGAGAAAAATGCAGACGTGGACTTA
ACAGATAATCAAGAGCGCACACCAATTCATTTAGCCGCGGAGAACGGACA
GACGAGATGTGTGACGGCCCTGGGTGAACACACTCCTGGAAGTGTCAATT
ATAACGAAGAGACAGGAAAATCACCTCTTCATTTGGCTGCCATCAATGGA
TTCAAGTAAGAAATATATTCATTCATTATTCCATTCTAAGGGACAGTAGC
CACAGACGCCACAGCATTTTTACTACACTGTAACGGAATGAAAACCCGGT
TTTTGGCAAGGTACTCGCTAATGGGATAGATACAGTTTTCTTTCCAGAGG
CAAGGACTGATTACATTTTTACAAGCTATTTACTGGTTCAAGAAAATGGA
TGAAGCGAATATCACTACAAAACAGAAAACTCTCGCATCTCGGTGAAGAT
TTGAAATCACTTCTGTCCATTTAGCTTCCCAAAAAAACATCATCCTCTAG
AAGTACATGAAGAATAATCTATTAAACTCAGCTAATTAAATTCCACTTAA
ATATCGGACTCTCGCATCATTTTCAGGAAAACGAGCAACGTCTTGATCGA
GATGGGAGCTGAAACGTCGTCAAGAGATGACGTCAATTGGACACCTTTAG
ATTATGCAGCACTGCATGGCCATCCTAAGGTTGTTGTTATATTACTGGAA
AATGATGCACCGGTGGACGCACAAGATAAGAAAGGTTATAACACATTTTT
TCAGTAAAAGTTACTTTGTATCGTTAAAGAGCGATAATGTAATGGTCAAG
GCGTCTGCGCTTGAATGCAGGGGTTCCCGGCTCGAATCCCCGCTCCTTTC
AATGTCCCGTTCAATTCATAGATAACCAAGCCGACTTGCCGTGTACCTCG
TGAAAACAATCAAAAGAATGTCTAAAAGTCCTAGATAGTTTTCCACGTAA
ATATTGACTCTATCTTGTGAAGGCATATCTTTATTTTAAATTAGCAAATG
GAAAGTTAAATGTTTGATTTTTACCGAGATAAGGGCTTTGAAAGGTGAAA
TACTCTTCTTCGAGAAACTCTTCGTTTTCTTCTTCATTTATTTTTTTCAT
TTCAATTTTTCGATTTTTAAATTCTAAAAAGGTAGGTTTAACATATAAAA
AAAAGTTTAATCTTTCTAAAATGCAGGAAATTGCCATTTAAGTTGGTGTA
AAATCGAAAAATTGGGTATATGTCCAGAGCCCTTAAATGCAGGGGTTCCT
GGTTCAAATCCCCGCTCCTTCCAATGATAGCCGAGCTATGACGAGCCTCG
TGGACCTCGTGAAAACAACCAAAAAACTTAAAGTCTATCTATAGTTTTCC
ACGTTAAATATCAACTCTATCTTGCCTTCACGCCCTATCTTTCTTTTAAA
TTAAAAAATTGCTATGTATGAGGACTTTTGTGTACAAAACGATTCTTAAC
ACAATGCTTCACATGAAAACACAAGTTTGTGTGGGCATCGTTGACAATTG
TCAGTCAATACATAAATAACTATAACTGAAATATTTTTCGGTCAAGCAAA
CCTTGTGCTCCTCATGTCTGTCATTTTTTATATTGATATAAGACCTGTTG
ATTGTTACTGACGTTTTCTTTGTACAATTATTTTAGGCTCGACACCGTTG
CATCACGCCTCAGCCAATGGAAATACAGACTGCATGAGTATCTTATTAGA
CAAAGGAGCAGAAATCAGCAAGACTGACGAAGATGGTAAAAATTGTTTAG
ATTTAGCCGTTGAGAATGGTCAAGTTGATGCTTGCATGGCTCTCATTCAA
CATAAAAGGTTCGTCGAACATTCGATTCCGCTTCTACTTTAATCGGGACT
AATTCCCCGAGATTTAATTTTACGAGCCAAAAAATCTTTAAATTTGGAAA
AATTTCGAGTGAATTTAGTTTCGCGAATGTATTGTAGAGGAGGCCCTTTT
TTATAGACCAGAGGGGGGTCTATTAAATCTTCATTTTATTTATGATGAGC
GCACAATTGAATGTAATAGGAGAACAAAATCAACATAGAAGCTTGGTCTG
GACATGAATATAAATTTATTTTTGCCTTAACGATTTTATCAGGTGGAAAG
AAGTATTGAACACTCAAGACTCCAATGGAACACATCCCATGGAAAAATTA
ATCGCAGTCGCACCTACAGTTGCTGAAATCGTTCTCAATAAATGTATACA
CCAAACCCAAGTAGTAAGAGATGACGGGCGGACTGCAACCAAAGTCACCT
ATAATTTTGAATTCTTGGACATTGAGCCTGACAAACAAGTCAACAAACTA
TATTTCGCACCATCAAATATGCTTCGCCATCACCAAGAGAAACTTTTGGC
TCACAAGTTGACTGTGAAGCTGATCTCTGATAAATGGTCTCGTTTGGGAC
ATTGGATTTATGTTTTTAGTGTGTTTTCGTATTTATTGTATTTGAGTTTA
CTGACTGGCTTGGTGATCATTGATAAACAAAGGTGAGCGGTAATTGTTTC
CCTTTCTGCCTGGCTGTTTCTCTGCCTGCTTACTTTACCGCCTGCAATTT
TTTTGTTCAGTATGTCATTTCATTTCAGTAAGTTATTGTTATTAAAGATT
TTCTATCTAAATGTTTGGATTGAAGCCCTGATTTTTAGAGGAATGAGAAA
ATTAATCGAGTTTCAGTATAGGAACCATTAGGCATGGTTCTACCACTTGC
CATTTAAATGTTCTAAAATTTTTGAATGATATTCTAACTTTCCAGATATT
CATCAACTACCCCACGAAACATGTCCCAATTCGCCAAAGTTGGACCTTGG
TTCCTTCTCCTCNTAATTAAATTCCACTTAAATATCGGACTCTCGCATCA
TTTTCAGGAAAACGAGCAACGTCTTGATCGAGATGGGAGCTGAAACGTCG
TCAAGAGATGACGTCAATTGGACACCTTTAGATTATGCAGCACTGCATGG
CCATCCTAAGGTTGTTGTTATATTACTGGAAAATGATGCACCGGTGGACG
CACAAGATAAGAAAGGTTATAACACATTTTTTCAGTAAAAGTTACTTTGT
ATCGTTAAAGAGCGATAATGTAATGGTCAAGGCGTCTGCGTTTGAATGCA
GGGGTTCCCGGCTCGAATCCCCGCTCCTTTCAATGTCCCGTTCAATTCAT
AGATAACCAAGCCGACTTGCCGTGTACCTCGTGAAAACAATCAAAAGAAT
GTCTAAAAGTCCTAGATAGTTTTCCACGTAAATATTGACTCTATCTTGTG
AAGGCATATCTTTATTTTAAATTAGCAAATGGAAAGTTAAATGTTTGATT
TTTACCGAGATAAGGGCTTTGAAAGGTGAAATACTCTTCTTCGAGAAACT
CTTCGTTTTCTTCTTCATTTATTTTTTTCATTTCAATTTTTCGATTTTTA
AATTCTAAAAAGGTAGGTTTAACATATAAAAAAAAGTTTAATCTTTCTAA
AATGCAGGAAATTGCCATTTAAGTTGGTGTAAAATCGAAAAATTGGGTAT
ATGTCCAGAGCCCTTAAATGCAGGGGTTCCTGGTTCAAATCCCCGCTCCT
TCCAATGATAGCCGAGCTATGACGAGCCTCGTGGACCTCGTGAAAACAAC
CAAAAAACTTAAAGTCTATCTATAGTTTTCCACGTTAAATATCAACTCTA
TCTTGCCTTCACGCCCTATCTTTCTTTTAAATTAAAAAATTGCTATGTAT
GAGGACTTTTGTGTACAAAACGATTCTTAACACAATGCTTCACATGAAAA
CACAAGTTTGTGTGGGCATCGTTGACAATTGTCAGTCAATACATAAATAA
CTATAACTGAAATATTTTTCGGTCAAGCAAACCTTGTGCTCCTCATGTCT
GTCATTTTTTATATTGATATAAGACCTGTTGATTGTTACTGACGTTTTCT
TTGTACAATTATTTTAGGCTCGACACCGTTGCATCACGCCTCAGCCAATG
GAAATACAGACTGCATGAGTATCTTATTAGACAAAGGAGCAGAAATCAGC
AAGACTGACGAAGATGGTAAAAATTGTTTAGATTTAGCCGTTGAGAATGG
TCAAGTTGATGCTTGCATGGCTCTCATTCAACATAAAAGGTTCGTCGAAC
ATTCGATTCCGCTTCTACTTTAATCGGGACTAATTCCCCGAGATTTAATT
TTACGAGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062418TCONS_00062418Clytia hemisphaericatranscript
TCONS_00062417TCONS_00062417Clytia hemisphaericatranscript
TCONS_00062416TCONS_00062416Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062418-proteinTCONS_00062418-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:243017..252225 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.36	33.71	21.1	19.71	48.17	36.61	52.22	54.36	42.71	54.78	48.79	30.24	32.91	29.3	18.12	24.56	46.87	45.5	36.68	39.76	38.24	40.69	23.41	30.88	30.51	31.94	14.15	13.92	19.96	18.16