XLOC_039162 (gene) - C. hemisphaerica

Overview
NameXLOC_039162
Unique NameXLOC_039162
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_366:15694..22204+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039162 ID=XLOC_039162|Name=XLOC_039162|organism=Clytia hemisphaerica|type=gene|length=6511bp|location=Sequence derived from alignment at scaffold_366:15694..22204+ (Clytia hemisphaerica)
gaacaaaataaaaataatcaaaatgatAAATGAATATGTTATTGAAAACC AGAATACGTTCTATAAACCattggaaaaaaagaagaaacttcaACTTTTC TGTGAAGTTGTCATGAAAATCATTGGTTATATTGAAAAGGCAAATGAAAA AGTCAAATCTTGGGTTTTGATGTGTACCTACAAAAATGAACATCTTGTTG TTGAAACAAAGTGAGTGAGATTTTCCACATTTTTTCCTTTATACTTTATT GACCCCCTTTTTGATTTATGTATAACACAATTATTTTAATCAAGTCAGTG ATTCTACAAAGTTAGTAATTAAATGTAGGagttttttatgcatttttgca tATAGGTTTTCACTGCCTTTTTATTGCTTTTAGTTTTGAATAAGATGAGT TTTAGTATCCTAAACTTTCATAATAAATAACTGAAATAGACCAATACTAG ATAACACTTCCAGTAGCTctaatttgttttccttttttattttactttaa tcTTCAGCTGGTATGTCCTTTTCCCTCATTatagaaaaacattttaacaa aaatgaTTATTTGTATATATGCTTCATTTTTTAGGACAATCATATtggat tttgatgtttttactgCTAGTCCATTGGTTTTTGAGAAACGACTTACCTC TGCTGTCGGTTATTCGGTGTCTGTAGGATCTGGAGTACAATCCAAAGATA TCAAGGACTATAAGTTCTTTCTTCAAAGCCAATACACAGAACCTATACCA TATACGCTGATAGAAAAAGTTGGTTTTATTGGAAAAGGGACTTGGTTTTT AAACGAAAAAGTAAGTTATTAAGTTATTCTTTCCATCTCGAACGATTTTT AGGTTAAAATTAgcattatttttattcataacaTAAGTCAAATGTAATAG ATATTTTACTCGCATCCTAATACCCATTTTTTGACCAAACCACGTTCCCA GCGACTTCTAACTGCTCTAAATCGACTCGTTCTATTTTTCAACTCCTCGC TACTGtattaaaaataatctttatCTGGAATAAGGAGATCACTTGGTGTG AGCAAACAAGTAACATTTTGAAACAGaagatttttcatttaaaagaaCTT AAATTTCCTTCTGGTACAGAGAATGttggaaatttcttttctttagtTAG GCAATTACTTTTCTGGTTTACAGATTCGccacattttctttttcaaaatt aaaataaaataaaactgaaaTTCACAAAAATNAAACAGaagatttttcat ttaaaagaaCTTAAATTTCCTTCTGGTACAGAGAATGttggaaatttctt ttctttagttaggcaattacttttttattttctggtttacagaTTCgcca cattttttttttcaaaattaaaataaaataaaactgaaattcccaaaact ttatttatttttgacctTCGGACCCTGTCTGATCTGCCatgaaaaggaat ttttttaggaaacttcattttataagagcatAAAAGGAGATGAAAGGGTA CGGCCTTCTCTTTTTCCCATTGATTTTCTTGTGTGTATAAACATTCTTCA AAACATTCTAAATTTTCTCCAACATTAAagtttcaaaatgacaatttttt ttttccatcctcccgTCCAACTCCAAATTTCTGTAAaccagaagaaaaaa aatacttgcctAGTGTGCATCCTCCTACAGTGAAGCCcagaaaagaaatt tattaagacataataagaatcCTCCAAATGTTTagggaaaacaaaaaaga gtATGCTTATTATCAACGACTTTACATCTACTGCAGATTTCTTACTAata gttttattttgttatttctaTTTAGACAGACTTGGTCAAGGCAGGATTCG AAAAATcagatgaaaaatttattcttggaGACCAAAATAAATTCAAGCAC TTGTGTCTAGACGTAGATAGTTCCTtgtttaaaaaggaaaattgtATCGA AATCAATAAGAAGTAAGAAAAATTGTTATGGTCTTAAAGAGGTCATGAAT AAAATTTAATTATTGCTGTTCCCAGGAAGAAAAATTTAGGGCTTTTAATA GCTTTTTGAATATGGGGCACAGCTAGAATGGGCCAAACCAGATTAGACat gtaaaaaatctaaaattctgCCAAACATATACTTCATTTTTGAATTTCCT TAGGATATACGAGCTGTTAGAAGGATTTGGAACAAACCAATGGAATGCAG AATTTTGCTTTGCTTTCATTTTATCAAGATTGCTACTGGCTGGTTCTCCT GCCTCATTGGATTCAGGTATTTGAATCATATTTGAAAAGTAGACCTACCT GGAGGACCtgtaaattaacccttgtccgtctGTCtcttaccagcttttct cgagattggctcattagttttttctgacttttgacACAAGATGCAAAATT GTAATGCCCACAAAATGTGACGGAccctgatttaaaaaaaaaaatatttt ccgtcCAAAATGTCAGAAAAACTGGCTTTTAGGCTGATTCATTAATTGCA ACAATGgatcaaattttggaaattaagTCTCGATTGTTGATAAactattt ctgatatttttgtcaaattttgatgaccttttgttgttatttttttcagt ccCTATACTTCTGTTCTATATTTATCATTAGGTGGGTCCAAAAAATGCAT TGTgcttatttatcagatttttaagTCCTTCAAAAACAATGTTGAACTTC CAGTTTATACAGGCTCTAATGCTTTTTTCAATCCTTCTAGGCGAGAGCAA TGTTCTTCTCCTTCATTCTGGTTCCGAGGTAAGGAACGTTGGAAAGACAT TGCTTCAGAAGCATATAACCTTTGGACAAGGAGCAAGTCTCCAACACAAA TTAATTGTATCTGGTGGGAGTGGATCTTCTTCTGGGACAAGCAGGTATAA TGCTTTTAATGACATACATTGAGCAAAAACAGTCTATAGAGTGCTCAAGA AAAGGAATTAACTATGAATTGCTACAGTGTTTCATGCTATGTAATTGTTG GGCAATTCGGTTGTGTATTTTCTtgcaataaaaactaaaaaacaacAGCA ACCGAATTGCCTGATTTTtaaattgaagatttatttaATTTTGGATGGCA AAACAAAATAAGTTtttgaaactctaaattttgaactcatttttaaatct ttatcaAAAAGATGAGATTAATTAGAACTTTGGATTGCTAGACACTCAGT CCTTAATGGTATATATAAACCGTATTTCATTTTAGTCGTTCCCTTCAAGA AATTTGCAACTCGTCATCAATGGTTCTGTGTGTAAACGAAACAAAGAATG GAGACAGTCAATCGGAAATGCTTATCCATTTGCACGAGAGATTTTTCCAA GGCACCAAAACTGGAGGTCTGGAATGTTCGGATTGTTCAGGGATCGTCCT GTCATCCAATTATAAAGAACCGCAAAGGTAAAGAAAGAAATTGGCAAAAG TTTGATTACACCCTAAAAGtcagatttgaaaagaaaaagaataaataaat taaatattGTATACCTTTAGGGAGATATATAAGTTCGCAAGTTCTTCTGT TAATTTGTGAAAACTTTATAGACCTTTGGAAATATTATAATCCTcacaaa aattaagttttttagacatttgtaattttaagggtttttagacatagttt tcttttgttttcaaaaaaataagcccaCTTCTCACAAAATTTAATCCTTG CGAAAGTTTACATTTCCCGTCCTTGCGAAAGTAAGTccaacaaaaattta atttaccatgaaaaaattgaatttgccATGAAAAGATTGCCTCGCGAAAA TAACTTCCCAAAAAATTATTCCCCTTAAAGCCATAATAACAATATGTTAT CGAGGTCTGGATTGctgtttcaaaaaatgttttaaacccattatcaaaaa attgttcaacTAAACAATAGAATATCCTCTTtctaaaattacattttcac GACCCGAAAGTTTgcaatgttttgactttttagagATGAATAAGAATTAG AATGAATTGTCTGTGTTTTTAATACATAAGTGCGagtaatattttgtttt tgcaaaATAAGCAAAGAGCCTCATGGATGTATAAATTGGCTTTAAGGTAG TAATTTTAGATCaccattttgtattttttagatTGCAAGGTCGGGTGCTG TCATTGGAATTTGTCAAAGGAGATTATGACCGCCAGAAGCTTGATGAATT ATATGAAGCTACAAATAGACATAAGGTTAGtagtgaaaaagttttttctt tgacAAGATAATGTCAATATCACACCATGGTGAGTAAAAAAATAGACATC AGTTTCTCTATTTGCCCGAGTTTCAATCCCATCGTTCATTACGTTAATTT CTTATGTACATTAATTACACTTCATGACAAAGAAAATGTAACAACTTTAA TGACTTTGAAATCAAGACGAAAGGGATTATGGGATTGAAAGTCGGACACa tttgaaaagtaataattatgacgtttgcataacaGAGCGCTATTATATCA TTTAGAACATTGATTTGATTGGTATCAATATATCAGCCATAATTTGATTG CCTCAATTTACAATTTATTTACAGATTGAATTCGAAAAAAAGGTTCTGTA AACTGaggttgtaaaaataattatatctTTAAAAATCATGCTTTAGGGTT TCTTGACTTCATGGGTGATTCACCACTGTTCGACCTGGCTAGACTCATTC AAGGAAGAAGAAAGGAAAATCTCCGAAAAATTAAAGCAACAGTTAAAGTG TTGCGAAGATGATAGATGGCATGATGCTGTAGCATTGGTgctatttacaa aatttattgtaagttcttaattttttatacAGGAAGTCGATAGTAAAATA CCAGACATGTGGAGTGAaagaattttaaagaatttttgacCCTTATTCTT GGAAAGggcattttttttaatttcaacatggagaccacctattttctGGC TCTTTTtcggggccgtccatatagtatgtacgcaaaaactttccaaaatt ttgatacTGCCTCcacccccttgtacgcagagaacaatagaaatgatgtc atttaaacaaaaGATGTATGCTTTCACTAAACCCCCTCTCCCTTCACTGT GTGTGTACTACTGgctgtttcaaaaaaaagtgtacaagtttGAATTGAGA TTGTGAGAAAACTATTAGAAAGGAGAAATgccaacttaaattttgagcta tcatactttaaatttgcttcacgtattcaaaagttatgaagaaaattaga aaaaaatctcgttcaaaaaatgtacttttttgagaaaaaagagggGATCA ATATTCAAGCTCACAAAACActaaaaaaagctttatttacgATATTTTTT CGTAACCTAAAGATTTGAGaccttttcaaatgttttgattgccAAAAGAA TACAAAATAATCGGGAAAATGGGAAGGAATTTCACAATCATCACAAATAC TCTAACTTTTTCTGaccaaaattttgagttttccaGGATAAGTGGGAATA TTAGGAAATTTATGTACCAAAACTTTCTCCTAAAAACCCAAAAGCAAACC AGAAAGATTCGTTTCCAGCTAACATCAAGAAAATGTTCCAATATTATTCA AATTCACACACATGCATTTTGTCTaataataaaattataaaatttgtcAA ACAAAGTTCCAAATCATcttaaaaaatcaatattttggaGATCTTTCAAC AGCAAAGCAAGTTTAGCTANCTAACATCAAGAAAATGTTCCAATATTATT CAAATTCACACACATGCATTTTGTCTaataataaaattataaaatttgtc AAACAAAGTTCCGAATCATcttaaaaaatcaatattttggaGATCTTACA ACAGCAAAGCAAGTTTAGCTTTCGCTTGAGAACTACCATTTCAGTTCGGC AAATTGCATAGTTCCGCAATGTTGTAAAATTTCGCAGCACTGTGTTGTCC AAAGGCCAGAGCAGCGAAATTAGCAGGGTAAAGCTGCTGAAAAGTCGCAA AGTTTTGCCCTGTAGCTGGCCTCAAACTGGGTTCACAAGTCCATCCAATC AAAATGCACCGAAGGAGAATCACAAAATTTGATTGCCTTTTCAGTGACGC ATCGTATTCCCAAAAATAATCCGTATCTGAGAactattgaaaatatttga gcCATTGAAAAGATTTCGTTCTTTATGATACATGTATGATACaccacttt ttttatcacaatttAGTTTTGCTCTTCAATCGGtatcaatttttctttgg tGGATGAGGTccgaaaattgaaacaaaactaTGAACGGACAGAGAGATCC TTCTGGCTCACTCTTGAGACGAAGCTCAGAGAATTTGTCAACAATTGTGA CCGTGAAAAGGTAATGCAATAAATGTGATTGATAGTTTGATGAATACTTC ATGTTaggtttttttcatatttcttgtTTAGAATGAATCCATAGATGTAA TATTTAGTTCCATGTATCGTTTTAGTTACTATCTTGGTTAAAGCCAAACG CTTCCATTGGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062499TCONS_00062499Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062499-proteinTCONS_00062499-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_366supercontigscaffold_366:15694..22204 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 8.74 6.82 7.83 9.33 6.2 8 6.45 5.74 3.13 3.52 0 0 0 0 0 0 0 0 0 0 2.33 4.32 0 0 0 0