XLOC_039168 (gene) - C. hemisphaerica

Overview


Name	XLOC_039168
Unique Name	XLOC_039168
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_367:86976..93314+

gene from alignment at scaffold_367:86976..93314+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_039168 ID=XLOC_039168|Name=XLOC_039168|organism=Clytia hemisphaerica|type=gene|length=6339bp|location=Sequence derived from alignment at scaffold_367:86976..93314+ (Clytia hemisphaerica)
AACTTCGTTGGACCTGAAGACTTGGGTTGATTAAAATCATCTAATCTCTT
ATCAAACGACGATACCAATCTAGCAGAAATCAGAATCTACAAATCAACCA
TTTTCAAATACTTAATGGTTCGATAATAATtgatttgaattgaaaaaaac
cGTTAGAATTACCATAACAACAAATCCAAAATGGCGTTTATGGCAGGTAA
TATCACCGCCTTGCTATCCATCAAAATCAAGGCGAGACATGATGACTACA
CCGATCAAGTATCCAGAATTGTGGTGGTCAAAATATTCATAGTTTCATCA
CTAGTGATGGGCGTTGATTTTTTCCACGATACCATCTCATGCATACCGCC
CGTCCATAAAGACAAAGCACAAATCATCCCGCCCAAATTCATACAATCTG
CATGCTGGATTAAAGGTTTTTACGTTTACCCTGATTTGGAGATACAAAAC
TCTGTCTATTACGGCATTCCGACCACGTTAATCAACGACGGGACATCAAG
CATCGATAGTGAACCGTGTGCGACCAAAGGCGTCTTTTTGCAGTCACGTA
AAAAACAAACGCATTGCGTGCCGTTAAAGAAACGATTCATGCGTCAGTAC
CAGTGGATGCCTTTCTTCATAGCTAGCATGGCGCTTCTCTTCTACATGCC
ATACATCATCTTCAGGGTGGTCAATACGGATATGATTAGCCTCAGAGCCA
ACATCAACGACCAGGTAAGAACATTTTCATTTAAACATTTACACTTAATT
CTAAGTGGTCAATGAAGTGAACAAGAATTTTCCACAGttggctctctcta
attcgatatttaAAGAGCTAATACTTTTCTTCGAataagagaaagattcg
aactaTAGAGAGAATTTTACActactttccagctgaggggaccaatgttt
tagttcgaattatagagcttCGGATTTAAGAGAGTTGACTGTAGGTACGA
GAACTGACCCTAAAGCGACCAAACCACAGTAAATACACTGACCATTTAGG
tttttttttcgccttttttgtatttttcataNtttgttttcattttctaa
ggATACAGCATCAGAAATGTGAATTTAAGTGGCTAAATACTCCTTGCAAT
TGTGATGTTTGACTTGAGAAAAAAACGTTTCAACAGGCATTTTACGTACT
GACTTTATTCACCATGTAAAAAAGCTGTAGTTGTGAAATTTTAGGATATT
GTGCTAAATATGTGGCTAATTCCATAGAAACATTTTTTGTAATACTTCCT
GTAtgattttgtgttaaaatgtgTGGTTATTTGCATACTTAGTAACTAgt
agtttttcttcattttaagcctaatttatAGATTTTTCCTGTCATTTATT
GCCACAATTAATCACatatcaattttaaagaaaggCATGCAAGGTATCAA
AAGAAAgccaatgaaattttcaaaagtttcaacaAGGTTATTTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaaaaatgatagaaaa
agGGTAATATTAGCCTCAAAACtacacattttgataaaaaagaaattcca
gTGAATTCCTAGAGTCCTAATCCACAATCCTGTATTTTCCTCTCTCTCAT
GAAACATTAGCTAAGAAGTTACAAGACATTatccaaaatcaacaaaaatt
gcatttttccaatgtgtcattcttttttgaacagaatCTACTCCTATGGT
CTTAATTGGTCGCAAATCCCTAACTTAAATAAAAGCTTGCCCAATGAAAC
TAGCGAAAACCTAGTACACCCTATATGCAAGATTTACGAGGGAATTACTT
GTGAGCGCCAAGAATTACAATTATCAGTTACTGGTATCTAAGACCATTTC
ATCCGTGGAAGATTTTTTAGGGATATTATTCATTTGCTCCTCAGAAAATT
ATCCtgcattgtaaattttttttatgatttaaaCCTATAAAGTACTCTCC
ATTTGCGAAGTGAATTTGACCTCCTCGAAATTTTATTTAGGAATCAGACA
CAGCTTCATTTTCCcattgaaattttcacctttcACTGTCAAGAATCCTC
AGCACCTAAAAATCATCAGGTGGCAAAAAAAGTTTAAGTTCACAGAAAAA
TGTAATATTCGAGAGTTTTGTCAAATGTGAAAAATTAAGGATTGATCTTA
TAGGGAAAAGTGATTTTAAGATATTATTACCTTCGTGATTTTTTTAGGGG
AAAAATTAACACTTCGAGTCATTacgtttttttgaaagtgagaaactgaa
ttgaaaattcaaaaaagaaagttCACGTAGCCCTGccttatttttcttaa
ttttctttctcCTTTAAGTAAGACACCATGTGTCTCTGGTGAAGGTGGTC
CTTTAACATATAGTTTCCTTCCCTTCTCTATCCTTAAAAAAATATTCCCT
AGTTATGTCTTACTTAGCATATGTTACATTGGCCCTATTACATttaagtt
caaaatttcaaaaaagatttctaaTGATTTTGACTAAAAAGTAGTAAAGA
AAAATTCTCATTATAAAGGTTGGATATGAGGGACCAATTtcctttttgac
attttgacacGAGTGAAAAACTGATGAATAAGTCCCCAGGTCATTTGACA
ATTTGTCCCATCTTGGGACCTTCtcataatatttaatttctAAGAAAACA
ACAACTTATTTAAGCCTCTCACACAACTAGCGACTAATTAAAATTTAACG
CATTCCCCCCTCTTTTGAAATCGAATCATGCAACTGGTCACAatattttt
tgaacaatttttcccTCAAATAccgaaagttttaaatttccttgaaaaaa
aTCGCTTCCTTGAATCTTTTTTACCTTTTGAAGAGCTGTCGTCGGTTTCG
CTATCGATCAATCGGAATGTTCAAATATCGGATCTCATAATCAATCagta
atttgtttttccttagttaaaaaaaaatcgcTTTTCCTTTCCTATGAGTG
AATTCAATATTTAGATCTGTTCTCGCCTTTAACCGGActgaaaaaagtta
ctttttcaCATCAAAACCAAATTATTCACTTTATTTTTAATTCCGCCATT
ATTTAGCTTCCCCTTTAGAACGTTAAAACCCCTGTTTGGCTGCCATgaca
aatttatatcaaaatagaCTCAGTTCTGTACATTCATGGGATCATTGCTC
ACCCAAAAAACAAAGCCCTCTATTTTTTTACGTTATAAGctcttactctt
aggttccaaataaacgggacGGAGGGTTGGAagattttcgagattttaat
aaatggggggacctaattgccgggcggggttggaaattgtacttctgaaa
acccaaaataagataaatataggctaaaatcaggctatttagagcaaaat
aaggggctttctctttgacagctgaaaatattcttcacaAATAATAAACg
gagggggtcctaataaggtccgggggttggaaaattttcaaaaaattaac
aaacgagggggggcgtttatttggaacctaagagtaaagactcttgttga
aaaattgattaCAGTTAACTCTCTCTTCGAACTATTTTCAAATCCCTGTC
AAGGAGAAACTCTTTTTAAAacattctataattcgaatcactctgtaatt
tgaacaaatttgatTCCATTTTCGAGTTTGAAGATTTGACTGTACTCTTA
AAAAAACCTAGCCAGTTGCACCGTTTTTCCCTTGATAAGGTGTTAATGAC
TCAACGGCCAAAACGGCGCTTTAGGTTTTACAGTAGCGGGGCTATAAAGC
GTTTTACGGTCCAGTAGAAGTGGTTTCATACCGTTTTACGCTCAATTAAC
TTGTTTTCGTAGAGTTTTACGGTCCATGAGCGGGGTTTCAAAGCGTATGG
CTTGAACTTTTAGCAAGTATTGTCTTAAAGGACGTTGAGGGAAAAAACAA
CTTACTAATGGAATTTTTTTCCTATAGGTTGATCGTGACTTGATTGTCCA
AAATTATTTCAACCATTCCATCAACAGTGTTCCTAAGATGCGCATGCGTG
TATTCATGAATTTCATTATCAAACTATTATACGTGCTCGTCAATGTTGTA
TCCTTCCTTGTCTTAAACGCATCCCTTGATAACACATTCTACACATATGG
TCAACAATGGATGGAGTGGACTAGACTGAACTCCACAATGCAGTTGGAAT
ACGAGCTACGTGACACACCGTTACCTAGCAACCGTATGTTACCATCATTT
GGGATATGTGATATCTCAGATTCGAGGAGTGATATATCGTCCACTTACGT
CAACAAAGTCTCAATGATTTGCGAAATTTCTTCTCATGTTTTATATCATT
atcttttcttgattttttggtttgttttggttctCTCAATCACTGTATCC
ATTATTGGTGTTATACTAAACATTTTTGGACACGTCAACAACATGAAATT
CTCACGGCACCGAGATTCATCAAAACTTATTTATCAACATTTAACCATAC
GGGAATGTGAATATCTTGAATTTATTCGGCGCCGTAATCTTGCCTTATAT
GGACTGGTTATAACGAAATTGAAAGAGATTAAAGTGAAAAATCATGTTTT
GAATGGTTTAACATCACATCGACGCTCTCGGCAGGGTAGTGATGAAGAGC
TAAATTCCCTGAAAGATTCTCTTTAGTACTTGACGATGCGCCGAATCCGA
CAAAACTTACACATTTTACAAATCGACAATTTGTGACCTATTTACATTGA
CAATATGGGCTTCACTTGgatttttggaataaaaaacggtatattttgaa
agtaaaaatgTCATATTTTTATAGACTTGCTGGACaagagattttgttga
ttttaacttcaatatattttaaatgtacataTTTTAAGc

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00062506	TCONS_00062506	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00062506-protein	TCONS_00062506-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_367	supercontig	scaffold_367:86976..93314 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.6	0.42	0.57	0.33	0.54	0.48	14.74	15.19	15.25	15.24	12.48	16.76	2.53	2.42	0.78	0.82	1.15	0.91	5.38	4.6	2.74	2.62	1.32	2.09	1.24	2.83	0.17	0.04	0.25	0.11

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XLOC_039168 (gene) - C. hemisphaerica