XLOC_039169 (gene) - C. hemisphaerica

Overview
NameXLOC_039169
Unique NameXLOC_039169
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_367:116919..121809+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039169 ID=XLOC_039169|Name=XLOC_039169|organism=Clytia hemisphaerica|type=gene|length=4891bp|location=Sequence derived from alignment at scaffold_367:116919..121809+ (Clytia hemisphaerica)
CGCAGGgtaatatataaaaaaagaagaatattgTACACAGACGTATTAAT TAGTCAATAAAGTGAGAAGAGAAGGAAAAAATCGAAAGGACTAGATTGAT TATCCGCCGTCGTTTATCAGACTCAAAGCAGACTTTTCGTGGACGCATCA CAAGTCAAAATCCATTCACACTTCAGCCGGTGAAATTGGAAATTAGATTG CGGTATTTTCAAGGCATTGAGTCATTTCTAGACCTTGATATCTTCGTAAG AATCAAGCTGTTTGACATATTCGATAATCGAACGTTTAGTTTACTAATTC TACGGACAGTCATAAACTTTACATTGGATCAATATGACTTTCTACGTCGG AGATTCACTAAAAGCTTTATTAAGTATCAAACTAAAAACACGCGACGATC ATTTATCCGATCAGGTTTCACGAATCTTAGTCGTCAAAGTCCTCGTCGTT GTCAGCATGGGTTTAAGTTTAATTTGGTTCCACAGTGAGACACGCTGTAT ACCTCCCGTCAAAAGCAAGGGTAAAGAACTACCGGCGCAATTCATACATC GTGGTTGTTGGGCCAAAGGTTTTTACATCTATCCACAGTTAGGTGAACAC ATGCGTAAGAGCGCTTATTACGGAATCCCGTTCGAACTGAAATGGAACGG CTACCGACCGGACGACCCGTCACAATTATGTCGTGTCAACGAATATGGGG GTAGTACAGACGAAGAAAATTGTTTTGCGATGGAAAGAGAATATTTCAAT CAATATCAATGGATGCCAATGTCAATGTTGTTGCTATCCTTTGTCTTTTA TTTCCCCTATATCGTCTTTCGTATGGTCAACACTGATCTCATCAATCTTC GATCGAACCTAAAAAACCTACAGgtgagttttgttttgtttttgtaccTT TCACCGCCCGTAAAATTACGGAAATAAAAAATCGACTCCCTTAAAGagtc ataaatttttgaaattttgactaaagtttaaagattttggcttaaatttt gaggaaaactcCCCTTTTTCACAAACGCGGTGGGATTTTTTATGCCGTTT GGGGTataaataacggaccaaaactcgatggggattgatatttccatatt ttctaTGGCTGGgatttgaattattttgtttgcaagtcagaaaattcagt ggggaattgaaaaatatcataacATTTTACAGTGagaatttgtttatttg attattttcaataggGGCAAAAATtcgaggataattttccaccaatgaag atttttccagtggaaaggggtcccagtgggtctctGACAGGCCTGGCCGA ACAACCCCAAAAGTGAGGaagctgaaggctcaaaatgaggaatttgacta ggaatttgagaaaaaaaatctcatttgctcaaatgtggggaggctgaagt ctccccgcttccgtcGAGcctttgtgagaagggggtgtaggaaatagtct ctctaagggtaaccCCTGTCATCTCGCAAGCCTAGTACCCCCCTGGAGat tcaatttgctttttaaattttaatggtttttgtacccaaAGGAGGAGCAA TATTTCTACCAGCATTTTTACAgccttttaaaaaagttttgactAAGGTT ATCGCTGCGAATAATTAAGCGTGAATCAAATGTTAAAGTTTGTATATTTC AAAGATAGTGAAATTCGTATTACCATGTTGTTACCCACGGTAGGATTCAG GGTTTTAGGGAAAGACCTAAGTGGCCCCCACCCACTACCCCGTAAACTTT TgtttggtttaaaatttttgttatttggttcTTCATGTTTAATGAATGGT GGAACCTATGtgtcatattttatttttacaaaagtaTCATCACATTTTGA GGTTTAGGCTCCCCAACAAAcgtaaaagaaatattttatttatttacttt atgAAAATATTGGTGTGTTAAAAGGTTTTATTCCCTGTTTTATTGTATCA ATTCAAAGATAATGGCCAATATGAAAGGTTTTCTTCTGTATGTAATCTTG TAACCGCGAAAACCGTTCAAAAAGCCGAAAGAAATCTATGTGTCAATGAA AATGGATTTTTATTTCATATCAGGgtttttctatatttcaaattttggaa ccttcctttcttttggaaaaaaaactaGAATATCTTGAGAAAAATCAGGT CTGACTGGAATATAAAAACTTAGAGCTTTCTGTgggtttctttttcattt ttttcatactttttgtattttatcacgttttttcatcttttgaacCTTGG ACTTGTTGTTCCTGTTTAGAAAAAAAGGGCTGACCTTAGCAAAAAGCCCT ATTTTGATTAGGTGTTTAAAAAGCATTTAAGATTATTTCCCTTCTATGTC CCGTATGGGACCAAATAATGACATCATGGTCTTCTTTTATTGGTCGCACT CCTCTTTGTGATACACGCATCTGATATGGTTTCGCTTACTCATACCCTTC TGGTGAAatggaaaatattcttcatCTCAAAACGGATGTTTATAACTTTA GTTTCCCATCCCTGATTTACATTTTGTTGTCACGGAAAAAAATTATTGCA CGTAGGTTTTATTAATAGATAGTCCCATGGAAAACTTATTGTAAGATTAC GTTTTCTGAATTCTTTTCTACCCTGTCTCAAATGCTAGGTTTTCTTCCAt gaattttcagccaaattttctaGTTTTAAGCGGGTCCTACTGATTCATGG CATCAGGTATTataaaaatgtcaaatgttATTTCCAATTTTGTAATGTCA ATTTGGTTTTTGGTTTTTCCATGAAAAAAGACTGTAAGCTAGTACATTGG CTATTAGaacgggatgagctggagtttttacaagatacttcactaattgg tcatttgaagtgatagagatgacgcgttctttagaaaaagtaacaaaatt gttttattactggttaacgaccaaccaaatcaaacaagagcttgtaaaaa ctccagcttgtcccattagaacacccccttctcacagacccggtgggagc ccttcccactggaaaaattaacCAATTAATGATTCGTTTTTCTTTATCTG TTTTAGATGGAGATGAATCAATTGGCTTATCTTTATTTCTCACAAGAGAT AAATTCCATACGCCGAAACCGCTTGAGAGTGATCGCAAATTATGGCGTTA AATGTCTCTACATATTCAGCAACATTCTCGCCATGTCATTTTTACATAGG CTACTTAACGACCGTTTCTATACATATGGTCTCGATTGGTTATCATGGTC TAAAGGCAACTCTACCGAAAGACTATACtttgaaaaaagagaaacaccga GTCCTGGGAATCAACTTTTACCGATCTTCGGCATGTGCGATTTACACGAC GTCCGTCTCGATTTAACGACATCGTATACCGACAAAATGACCGTCGTTTG TGAAATGGCGTCACACGCCGTCTATCAACACACGCTCGTTATAATATGGT TTCTACTAGTCTTCTCAAACGCTATGTCAATCGTGGGTTTGATTTATTAT CTCTGTAATCATTTGCGTATGTTACAAAGATCCAAAACAGCGAAAACGGA TTGCTTATTATTTAGGAGATACATTACTTTACGTGAAATGGAATATCTTG AATGTATCAAAAACATTGACTTGGCTGTTTATGCAAAAGTCAATAAAATA TTGGATGATAATCTACTGAACAATTCTGACGAAACGCCCAAGATTCAGGG CGGGCAACCAATTCAAGTTTTAACCATGTAGTTAGAGTACGTAGTGGCAC TCTACTTTTGATAATTCCGTCAATAGTTTTCTcgagcattgagtttaaag tttaaagggGCTAAAGTAAAAACTTTAGGATAGGAAATGAAGCTACTTAA TTATCCATCCGGAATGACCGCACGTGGTTTTtagccggattgaaagtaaa acctaTCGCTAGAATTAGATACATtcctcgaaaacaaagaaaccactaga tacaatccgtcgtcatgatatTGTTGCGCGTTCTTGAtggggaaataagt agcttcacttttttgcctgggaaaggttagagattcaaTGTTCTCGAGCA CTgacacaaattttttttccgtgaacggacggaagtatcttcgacggtca gaagtatcatcttttgacggtcagaagtatcatttttaatttttcctatc cgtcattccgtggttcagggggtattgggtcatTACCAATCaattaggta gggtcagggttgctagtaacggcttgtcactgtgccgggtgcatactcgg cgccttgggccccgcagggttgctagtaacggctcaaATTTCAGCcagtt taaaaaaggggtacttttacccatattataataacattacccccgtcttt tgctaGTTTGGTaaaatatgttatgaattgcgtgattttgctgtgcggcg atggctcaacggataaaGCGCTGGCTTCCgcatctgaaggtctttctttg gtggtggttcgaatcccactcggtgcgaaaattagacaggtcgaaattga tggacaaatgattgacaggtatgaaaaatCAGTCAGAAATGAGAAACTAA GTCTCAGAAAGTAGAAACAGATAaggtgaaagataggaaagggaaaatgg gccgtcaaaagatgatacttctgaccgtcgaagatacttccgtccgttca cggaaaaaaatttgcagCACTGACAGTGGATGAGTTGAGTTGGAAAATAG AATGCGAAACCACAGTTCACACAGCGAAGAGATGTTGTAGATAATATTTT AAGATTGTTGCAGCAAACTTATTTTTAATGTAAATTGGTACTTATTTAtt gatcaaaatatttatttttatagatAAATTAATAATTTTATACGAAAAGA AATGTATTCATTGTTCTTGTCTTCTAAAATATTGTTGTCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062507TCONS_00062507Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062507-proteinTCONS_00062507-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_367supercontigscaffold_367:116919..121809 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.08 0.27 0.19 0.27 0.4 6.19 6.38 4.09 3.22 7.88 4.13 1.08 1.12 0.74 0.69 0.47 0.81 0.97 1.52 1.03 1.03 0.26 0.65 22.92 11.6 0.61 0.89 0.15 0.19