XLOC_039170 (gene) - C. hemisphaerica

Overview
NameXLOC_039170
Unique NameXLOC_039170
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_367:29229..36610-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039170 ID=XLOC_039170|Name=XLOC_039170|organism=Clytia hemisphaerica|type=gene|length=7382bp|location=Sequence derived from alignment at scaffold_367:29229..36610- (Clytia hemisphaerica)
TTTAGATAATATAAAAATTCAAAAAACAAGTATGGCAAGTGTTGTGGTAT ACGTTGTGTTTTCAATCATGGCTTTCTTTTCATGTGCCACCATCTTTGTT GTAATGTCATCCAAATTTCAACACTCGTTCCCACTCTCCTTCCAATTTGA ACAATCAAAAGACAGGAGATCTGTTGAAACTATGGAAACACAGGTACATA TGCTTAGAGATATTTTCCAAATAATTTCATCTGCTTTGAAGGGGGCCCCC AGCGGTTTGCGTGATTGCGTGAATGGGCTTTAGAACATCCAAAAAATTTG AAGGAAATTGTGTGTTTCAGAGTCCGCAAAACCTGATTTGAACTTGTCCT TAATTGTTTGCCTNNCCCAAACAAGATGTGTTCAGTCGGTTAGGAACTTT ACAAGATGATGAAGCAGAAGAATCTCCGCCTCCTAAAAATGTTTTCAGTC GGTTAGGAGGAATGTAAAACATGAGGCTGAACAAACGTCTTTAATTGGTT CCGGGCACAATTACATCTCGCGTTGAGTTTTCTTGCGCTTTCAGAAGGAT AAAGGAAGAAAGCTTGAAAAACATTGAGATTCATCGATTACGCGACGCTC TTTGTGAGAACCAACGACAAGTAAAACAGTGATATCCTGGTTCTGTTGGA TGGGTTAATGCAAGTGCAAAGCACTGGTTGCAAAAAAATGGATAAATTAT TGATGTTTTAGGCAGCTGTCAAGGCTTTAAAGCGTGAAATAATAAAGGGA AAGTTTATCATTAAGGGATGTATAGAATATTTTGGGATACCTTCACCGAA CTGCCACCTGCTGAGATGAACATATCTTCATGATCTTGGATTATAATAGC TATAATGAATTATAGCTAATTTTATACTTTTCAAATATTTTTATTTGCGA ATTAGCAATTCATCAAAGTATTTTTATATTTACATTTTTATTCATACCTG TTTTTATCTATAAATACTGCTATTTAGGATAATTCTGTTCAAAATTTTAC TTGTATCATGTGACTTCTGTACCCTGTTAGAGCCTTGGGTGTTCGACCGA TAGATTTCGATAGAAAACTATCTCAATTCAATAAAAATTCGCATGGAGAA TTTGCTGAATCAAAATGCCGTTCATTTTTGGCTCAAAGTTTTAGATTTAA ATTTTTGTTGGTGTTGAGTTTAAGCCTCTTTGTTCTTGCAGAAAACTGTG CTTATATATTTAATGCTCAGATAAGTTTTGTTTTGTGAACACAACCAAAA ATTTGTTCGTGAAACAAACAAAAGTACTCACTTTCTGTATAGAGGTCACG TTGATTGTTATTATAGACAATACTCAAACACTACAAGAGTAAGTGGTATG TATGGATATGATTAGTTCAACTGGTAAGGCTTTTATCCCTTTTATTACGA ATCTACGAGGTGTTTTCAAGCTTTTCAAATGGTCCTTTAGATTTTGAAAA TAGTAAAGACAAGTCACACTTTTTTTATATATGAACAGTTTTATAAGAAC AATGAGGCTCAAAATCACCAAAAAAATAAGAACAATTTAAGAACAATGCT GAGCCTGAAATTACTCAATTTCAAGCAATTTAGGGGTTAAAGTATCGTAA AAATCGGGTATAGCGCCTAAAATATCTCAATTACACCCTATAAATAACAA CAGGATAAAAAACAATTTGAGGCTCAAAGTGCCAAAAAAAATAAGAACGG CCGAGCCTCAGAAAAATGTTACTGGTTCTTATAAAAAAAAGTGTATGTGA ATACACATAGCATGGGTTATTTTGATCATTCTTTAGAACAAATTTGGTGA CGGAATCAATGCACAGCTCAATGATAACATTCTAAAGACATACGAAATGC TTTAAAATTCTTTAAATCATCCGCTTAAGATTATCTTTTCAACGAGGTAT TACTTTTAATTATATCTTTTCTCATTCAAGAGTAATGTATCAATGTGCGG ACTGCCAATTTTTTTGGAACAGACTAAAAATGTTCTTAACATGTTCTTAT TTTCACCATTTTGTGAGCATTTCTGTTCATGAACATTTTAGAGTCCGCAA AGCCTAAAAATGTTCTTAACATGTTCTTATTTTCACCATTTTGTGAGCAT TTCTGTTCATGAACATTTTAGAGTCCGCAAAGCCTTAAAATGTTCTTAAC TTGTTCTTAACATTTTGACCATGAAAGCCATGAAATAATGTTCTTATATA GTTTGTTCTTATAAAAAAAGATTTTTACATTTTTTAGATAATATAAAAAT TCAAAAAACAAGTATGGCAAGTGTTGTGGTATACGTTGTGTTTTCAATCA TGGCTTTCTTTTCATGTGCCACCATCTTTGTTGTAATGTCATCCAAATTT CAACACTCGTTCCCACTCTCCTTCCAATTTGACCAATCAAAAGACAGGAG ATCTGTTGAAACTATGGAAACACAGGTACATATGCTTAGAGATATTTTCC AAATAATTTCATCTGCTTTGAAGGGGGCCCCCAGCGGTTTGCGTGATTGC GTGAATGGGCTTTAGAACATCCAAAAAATTTGAAGGAAATTGTGTGTTTC AGAGTCCGCAAAACCTGATTTGAACTTGTCCTTAATTGTTTGCCTATCGA AGCCTGATGTTCTTATAAAGTTTGTTCCTAAATAAATAAATAATATATTT CCTTGACAAGTTAAAAATGGTACATAACTCCGAGTTTCATGCTCTCCTAG CAATCGTCAGATGTGAATAAAATCAAAACATACTTCTCTTTTTCTACAAA GGTTAAAACATTGAAAAAAATGAAAAAAAATGATAAAAAGTTAAAAGGTG ATAAAAATGATGCGTGCATATTAAAAATTAATTTCTAATTGTGAAATAAA ATGCTATGGTGGATTCAGAGGGACCTTTTTAAAGTTTTTTAATAGATATT TATTGACGTGTCTGCAGGTTGAAATCAGTTCAGTTCTCTTCTTAATTAGT TTTTGTTTTGACGTAATGATATGGTATTTTTTTCCGTTAAACATAAATTG CAAACTCTACCACCATTGTTGTATGGGCGGGCTCGGTCAATTATCTTCTT AAAGTTTGTTCTTATTAAAAAATGTGTATTTTGATTTCTTTTACCTTCAG CTTGATGAAAACAGAAGAGAAGACGTTGAGGCTGAATATTTATTAGATGA TAAAGAAGGAGAAAAAGAAGTAGAAGAAGAAGAAGAAGGAATTGATGAAA AATGTCCTTTTGGCTTTGATTTCTTAAAAAGGTTGGCCGTCGTTTTGTAA GAGATTTCCATTTTTGCACTAAGATTCTTGTTAATTTTTCTTCCGGAAAC TGCCTAACTTTCCGAAACTCATTTTTCAACTACCCAAAAATTTGGTCTTT TTCCGTTAGAAAAGTGGCAAAATAATGTTAGTGTGGAAATGGAAATCTTA TACAAAACGAACATTTTACAATCTTTTTTTCTTTTCAACCATTTGGTGTT ATCTTACTCAGATAGTTTACTGAGTGATAAATCATTGGGCCTCAGTCTCA ATTTATGCCATGTTAGAATCAAAATAATGCTAGAAACTTAACAACAAATG AGTATTTTAGTTAGAATGCTGAAGTTTATGGTTCGGGAAATTATTCGCAT TTTCATTTTTTTAAATCTAGGATAAAGATAAAGCTACCAATTATGAGCCA TTCTTTTGGTTAAACATTGCGTGTTTCTACCAAAAAAAATAGTTTCGAAA TGACCCATATCCAGAAAATGTGAACATATCCTTTTTTTGCCACACAATTT AATAACAAATAAAACAAAACTTAATCCGAATAAGCTCATCTTCTTGGAAC AACCTCCGAAACAACAGACTGAATTTGAAGCTGCAAAATCATACCAGTAT TTAAAATGATGATTTTGTAGTAGCGTTATACTAATGACAATGACTCGATA AAGAAGTCGAAATATAAAAGAAGATGAGCTTATTCGCAATAAAGGTCATA ATATTTTGATAATTTGGGTTATTTTAACGTTTTTCAAGATTTAAAGTTCC GGCGAGAAAGTCGATTTTGGGCTATCTCTTTAATTTAATCGAATATTTCA ATTCGGAAGGGGTTGGCAGACTTACAGGCTCTATTTTGAGCATTAGTGGA CTATTTTCTAACTTTTGGATCCTCAGATCCTAAGGTCCTAAGTATTAAGT CTCATGATAAAACTCAGAGTTAAAACTCTACCCTTCCAACCTACTTTAGA GCACTTACAAATCGCTTGTGGTTCAAAAACTTCCTGGTGTATTTCTCTTT TTTCTCAAATATATGACCTTGATTGCGGATTAAGTTTTGTTTTATGTGAA CATATGGTTTCAATTTTTTAGTATCTCAAACCCTTTTAGGGAATCGGAGG ACAAATCCGCCTATTCACCGCCAAGACTTTTATTACCAGCCAATCGTCAT CAGAATTTCTCTGGTGCTGTATTCAATCGTGATTTGATTTGTCTTGACAC ACTGGATGCTAAAGATGGACAATGGGTTGGTTTCTATGAATGCCATGGTC AAGGTAGAAATCAGGTAAAGATATCTCGAAAAAGATGAGACTTGTTCTGT CAAATCTAATCAGATTTAACGCTAACATGTCTAGGCTCCTGCTCATCCTC TAGCGAAAAAAGTTTCTATATAGGAGATATATCTATAGAGGTTTGCGAAT CAAACTGTAACATGTCATTTTTTCTACAACTCAGTTTTTTATAGAAATTT GACCCCTTTTTCATTTCTGGTAGGTCAAAATTGTCAGATAGATAGCCTTG ATTGACTGAAATCGATTTCAAAGTTTTATATACCAAATTTTAAGCTGAGC TTTCCTCTATAGAACAAAAAAATATTCAGCTAGATGACATATCTATAGAT TTTCATTGGTTTCTATAATTGTGTAGATGATTACGTTTTCACAAGACGGC TTGATAGTGACAGATAATGGTCATTTATGTTTGGCCATCAAAAACCTTGT TTCAGAAGAAGTCATTTTGAAGAAATGTGATCATCTAGACGAAACACAGG TAAAAGATTTATAATATCCCTAAAGTTATTAGAATTTACTCTAAGGTCCC GAATAGTAGTATGGGGGTCCAAATAAAAGGGGGGTCAGAATTTGTACATA CAGAACGGGGCTACTGAGAACAATTTTGCTTGTGATAGCTGAAAATATTT TCAACAACGAAAAATAAAGGTAGAAGGAGGACTCGCGTTTCATTCCGTTA CTTTTATCCCCACTGGCTGAAAAAAATGACCGGGTCTGTGGGAAGGGGAT GTTTGATAGTGGAAATAACTTTTAACGCAACAATCATTCATTTACACAAT GTAGGTGTCACTATCCATACTAAGGCCATCTTTTCTGATTCTCTTGACCT ATGAGTTGAAAAGTACAAATTTAGAAATCGCGCGTTTTAGATTATCACAA AGGCTAGCAAGAAGAACAGTCAGAATTTATTAAGTTTTCAAACATCACAG TTTAATTTAATATCGTTTTACATTCCATCATTACAGATCTGGTCAGTACA AAGTAGACGTGGTTGGTTGATGCCAATTGTCAAAGCACATTACTGTTTGA CAGCTCCTGATCGAGAGTTTGATCCTGTCAAAATCTCAATATGTAAATTA GATTCTGAACAACAAAGATGGCAACATTCTATTCAAGAAGTTTTATCTTT ATGGATCACCGGCTCATTCCACCAGCATTTCTTCTCAAATCGGAAACAGA AAAAGAATCGAGCTAAAGTCAACAAAGTTCTTTTACATCAAACACCACAA CAATCGTTAGATGGTAATATCCTTTTTGGATGAATGTTTCTTTGTTATTG TTTTGAAAGAATGGATATTGATTTTGCCTTGGCACTGGAATTCTTTACCG ACTTTATTGGGCATAAAACATGTTTTTGTCTGCCTTACATGCATTATTGG TTAGTTGGCTTGCTTGGCATAATCACCCTGCAAAATTGAAATGACATTCT CGGGGGATTTAAAGCTTTCAAGTTTCAGAAACTGACCAAGTTTTTTACAA GATCTGAGACTGGAAATGCTTACGAGGACTTTAGTTATTGATAAAAATTG TTTTAGTCGAGAGGGAGGGTTACTCAATCAGTCGGCGGGTACACGAGTCC AGGGTACACTTTTTTAGGCTCTGAAGGGGTCCCAAAGATTTATATCAGCC AGGGTCCACTTTTCAAACTCCAGCAGCACGTCCTCATCGGCCTTTAAGGC CGTTGCCCCCTCACCCGGCCGGGGAGTACATAATTATTTAGAATCCTAAT TCGTTTTCGTAAGATTAAAGGTTTTGTTTTTAAATAAGAGTGATATTGTT TACTTACTCATCAATTTTAATTCACAAGCTTTTTCACATTGGATTGACAC GGATGTGGGGCAAGATTGGTCGGAAAAAGGAAAAGAAAAAATTATGATAG TTTTGAGTTTGACCGACTGGATTTGATTTCAGTCTGACATAATGTCCGAG TGACTAAAAATATTGATTTGCAGCTCTGTGTACATAGGCTGCTTACGTAG TATATTCTCGCCAAGAAAAAGAGCATTCTTGTGTTTGAAACACACCCACG GGGACCATATTGATTTTCACCCGATTGACAATTGATCACGTCGTGTTTTT ATTTCGATTTTCTCATATTTATGATGTATACATCACCATAGTTGCCTATC AATATTCGATTCAAAGTAATTTATTCTGGTTCTTTTCATGTGTATTTCGA CTGAAATTATTATTGAAAACTAGATAATACGTTTAGGGGTTTTGTTTTGT GTTTCCGTGTTTCCCATTTCATATCAGACACATATTTTATATCAGGACAG TGTCTGCTTATTGTTATATTATGCTGATACAAGCGAAAAAATGTTTTTCT TTTCCTCTCTTTGACCAATCTTGCTCCACATCCGTGTCAATCCAATGTGA AATTGAGCGAAAAAGCTTGCGATATAAAATTGACGAGTAAGCAAACGATA TCACTCTTATTTAAAAACAAAACCTTTAAGCTCGGCATGATTATTCATTT CTTCTGTTTATATTTATTTATAGTAAATGCCATTTTGTGGCTTTTTAAAT TTTTTATTAAATATTTGTAAATTCTAACCGAATTTTAAACAAACTTAACC CCCTTCGATATTTGCACTCCAACAAAATGGCGGTACTTGTTTATTACGTT GCTAGGAAGTAGACACCCGTTTGTTGCTATGTAAACCAGACATTAAAATA CCAAACGTTTTGACCAATGAGGTTTAAATTTATTTTTTTGGTACCACATT CAAAGTATTTTCTTAATGGGAAATACTCCCACGGTTATGGCCAACACTTC CCTGTCTGATAATTTCATTCATACCCACGTTATAGGTAGCCATCAAAACC GGGGGTAAATGACAGTTATATAAACTTACGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062509TCONS_00062509Clytia hemisphaericatranscript
TCONS_00062508TCONS_00062508Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062509-proteinTCONS_00062509-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_367supercontigscaffold_367:29229..36610 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.26 1.89 2.55 2.48 2.56 2.22 10.56 10.69 5.92 4.56 5.73 5.35 2.7 1.96 2.29 4.82 3.24 2.85 0.39 0.72 1.91 2.18 2.71 2.12 1.73 2.63 0.77 0.54 0.87 1.23