XLOC_039173 (gene) - C. hemisphaerica

Overview
NameXLOC_039173
Unique NameXLOC_039173
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_367:123638..129584-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039173 ID=XLOC_039173|Name=XLOC_039173|organism=Clytia hemisphaerica|type=gene|length=5947bp|location=Sequence derived from alignment at scaffold_367:123638..129584- (Clytia hemisphaerica)
TTCAGCTTGAAATAGAAATAAATGAATAAATAATCTTTAAATACAATGAG ATGAGTGAACAGCGAAGAAAAACATGTCATGGATAACCATCTAGTCAATT ACAACTATGGTAGTAAATCTAGGTAAGGTTTGAAAAATTTCATATGAAAT ATAAAAGTGTTCATATTTTAACTTATGCTAATGTCAGTGTGGTTAGAAAC TTGAAGATCATTAAAAAACATTTCACAGGTTGAAGGTGTTTATGATATTT AAAAATTCAAATCACAGTTTTTTTGGAAATACGTAGCACTGTGGAATTTT TCATCTCTCGTTTCTAAGCAAAAACTACGTCAGCCTAGCAAAAAACAAGT AGAAGTGTTAAGTGTTTCTTTCTCTCTACAGAGAATGATTTCGTATAATT TCAATGTGAGCCTTTTTGGAATCTCACATCTGGCTTTTGTACTTCCCAAA GGCTGAGCCGTTCCAATACAAAATTTCATAATACCTGATAATACTACTAT TTTCTGGACATTCCTACATTTCATTCCTAGTGGAAATGAAATTACTCCAA ACATCTTCAACTGTTACGTATACAGAATATTTTGAATATATGATATATTG ATACAGGCATTAAAAACATCTTCATTTTTTTCTCCAGCTTCTGCCCATCA TCAAACTTCATCAACACCATCCGTATCCAAGACAACGAAATCAAGCAACA ACAGCAACTACCGAGAAGCATCAAAGGCAAATGGACCAAGTCTGAAGATG AGAAATTGAAGACATTGTGTGTCTCTTTGGGCACTGATAACTGGTCGGCC ATTGGTAACCATTTCCCTCAAAGAACTGAAGTACAATGTCAACAACGATG GAGAAAGGTTTGTGGATTTTTAAAACTCTTGCCTAGGGACCTAAGTCGCT CACTAACTCAGCTAACTGAAGCTTTCTCAATGCAGTCTGAGTAACCATCA ATTTGGTAGAATATTTTTATCTCCCAATTTCGTTTACCAACTTAAGTAAT GTTGTGAAAATTAAAGTAATCTTTAGCTCATCATTGTTATAGTTTTGCTC AATTTTTCACGTTCTTAAAACTATCGCGATCGGATACGTTTCTATCTTTT AGTAGATTCTATAAAGGATTCTGAACTTTCTACCAAACATACCATCTCAC CCATCATTAAGTAGATTCCATTTCGCGTCGTCTAAAATTTCGTAACCCTA GTGATACCAGACCAACATCACCAAAACCACTTACGCAATTCGAAAGCTCT CAAAAATCGATGTACAATCATGTTCGTAATATTTGAGAAAAAAGGGAAAT CCTACGGGAAGTTTTGAAACTACAATCGATTTGTAAGTGCTCTAAAGTAG GTTTGAAGGGTAGAGTTTTAACTCTGAGTTTTAACGCTAGACTTAAGACT TAGAACCTTAGGATCTGAGGATCCAAAAGTTAAAAAATAGTCCAATAAGG CTCAGAATATAGCCTGGAAGTCTGCCAACCCCTCCCAAATTGAAATATTC GATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTTAAGTTAAAGAGATAGCCCAAAATCGAC TTTCTCGCCAGAACTTTAAATCTTGAAAAACGTTAAAATAACTGGAATTC TCATTCTATTTCGACCATGATTGTAGAAGATTCTCAATCAAGGCTGTTCC TAACGTAGGAAGGCCATACATTGCTCAAGATAATCGAGTTATTTAGTTTA TGTATGACCTCGCTTCCAATTCCAGGTTTTGGACCCTAGTCTCATCAAAG GTGCATGGACAAAGGAAGAAGATGACCTTGTAGTTCAACTGGTCAATCAA TATGGTCCAAAGAAATGGTCACTCATTGCTTCACACCTTCAAGGACGTAT TGGTAAACAATGTCGTGAAAGATGGCATAACCATCTGAATCCCAATGTCA ACAAACAAGCATGGTCTGAAGAAGAAGATCGACTCATCTACGAAGCACAT TCCCAAATCGGTAATCGTTGGGCGGACATTGCTAAATTGTTGCCAGGCCG AACTGATAATGCTATCAAGAATCATTGGAATTCGACCATGAAACGACGCT TCGAACCCGGTTTTCGTCAACGTACTAAACGTGAAGAGCGTCGTATTATT GCCGCCGTCGCCGATAAGGAAAACGTCTACCCAAGATGCACTTCTTCGTC AACTGTCACTGGTCGAGATCAGCTCATTTCGTCACAAAGTCTGGTCAGTA AACCCATGCATGATTTACTACCGATATGCGACGAAGACGGGGGCATCAAC ATCAAATTGGAACCTGAGGATCACAATAACCAGTTCAGCGATATCGAACC TGATCCAGACCTGGTCATCACACCGTTGAAAGACATTAAAAATTTCTCAG ATATTTTAGCAGAGATGGGTGGCGTAGATGGGATCTTACAAACATCACAA ATGCACCCGTTGGCTGATGACAATAAAGAGAATTTCATCCCGTTGATTGA AACGCAACCGCATGAACAACAGAACACCACCACTACACAAAACAGGTGAT TTGAACTTTATTAGATTTATTTATTGTTTTTCCTCTAGTGAAAACAAAAA AACTATAATCGATAAAGGCAAACCTTTCAAATCTTGAGCTCTCATACCAA TTCTGATTCTATATATTCCTAGGGAAAAGAGGCTACATAGAATAAGGCCT TTAGTCTCGTGCTTTTAGACTGATTTGCCAAGTACAAAGTGATGTTTTCT ATTGTGTGTACTGTTTCACTCTCTGATTTCTTACATTCAATAATATAATT TGTATGTTATATCTCCTCTTTTCTTCAGGAGTCTCACTTCCATCCCTGGA CGCTACAGCATGCCACCGAGTATTTTACGTCGATCTAAGAAGTTTCCATT CTTGGATGCTTCCAACAATACGTTCAGCAAAGATGAATCCATTGTTTCGT ACCAACAACTGGGCTTCTCACCTTCAGCATTTCTGAACACTTCAAATTCG TATAATGGAGAAACTTCAAAAGAAATGGTCACTTCGACACCAGCTAAAGG TTTGATGATGTTTGAGTTTTGTTTAAGTATGCTTTATCTCGTAAGGTACA CCTCATGACCTAATCACTTGATTTTCTTTTTTTTCTNTTTGTTTAAGTAT GCTTTATTTCGTAAGGTACACCTCATGACCTAATTATTCGATTTTCTTTT TTTAATGTTAAATTAATTTTACTGGACGCTTACAATGTGACCGGAAAAGG CGGAAAAATAATATTAAAAAAATGCTTACAGTTTACACCTATTTCTACAC AATTGTTTTTTTCTTCAAAAACCCTAGAAATTTTCCATCTTATTGTAATA ATTCCGAACCTAGTAGGTGCTTTTTTAAACACACAATTTATACGTCTCTT GACCACTAACGTTAAAATCAATAGCAAGGTGCGGTATCGATAGATAAATC ACGACGACTGACGGATTTCATGCCTTCGTTCATGCTACGGAACTTTTTTA CGGGCTGCCCCGAGGGAAGCTCATTGAGTTTCAAGCCGAAGGCTAGAGGT CAATCTCTTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCG GCCTTGAGCGACCCGCCTGGNGAACGAATTTTCGCATGATTTTTTTAGAA ACAAAGAGGGCGTAGTACGCGTGGTAACTCTATCTTGCTTTTGGTTTAGC CCGTAGTAAAGTTTCTTAGTTTAGATTAAATGAAGTCTAGAAGTAATTCA TCCATCGTCGTGATTTATCTATCAATACTTGATGTCGCTTATATCTCTTA CGGAATTATTTTGATATTCTTTAGGCTTGACGACCACTCCTATAACGCCC TCGATTATGATCACACCTCTGGTTGACGAAATTAAATTCAATCACGGGAG TAGCTCCAAAAAACGAAAACCATTCTTCAGTAGCGCCACCAGTAGTCTCA AGAAACCTAAGAAATCACTAGTCAGTACAACTCCTCGCACGCCAACGCCT TTACGAACGAGCAAGAAAGAGCAAGTATGCACGGATACTAAGCTAGCTAC CATTGATGAAATTTCTAAATTGTTAATGAAGAAAGCGAATACTTCGAGTG GGACAACTCCTGACCATGATTATGCAAAATTAACTGAATTGAATTCCATA GCTGTGGATTCGAGCAATGACTTTTCCAGCGGTTCTAGTAAGACTTCTTT GAGGCGGACCCTTTTTGATGAGACGCCCTGTCAAAACTCGATGGTTCGAC CGCTCGGCGTGAACTTGTTTACTGAGAAAGAACTGAATGCTATTGAGCAA ATGTCCACTTGTTTCACACCTCAAAAACGAAAAGATAATTTGACTACAAC GACGGCAGCCGAAAGTAAAGAGAAGTCACAGCACAAAGTGACTTTTCAAG ACACATTATCGTCAACTAGTTTTGTCAAGAAAAATGATAAAGGATTCAGT TTCATTTTGAATTCACAACAAATGCCAAAGATGAGCTTATTTCAACATCC ACAGCAAAATAAACAACAAGTTGCGCAGCGCCTGAAACAACTTCCCGGGC GGCAAGAGATTCGTATTTTACCGCTGGTCGGGAAACCAATGAAAATACCT ATTCGCAGGTTACCTCCACGTAATTTGAAATTTGCAGACGATAGTGGACA ACGTCAGCAGCTGTTATCACGCCCAAAAACAAACATACGCTCAACGCCCA CCCAGGGTGATGCTTTCCGGGCGGTAGCTTTCGGACAAAGTCATGACCAG AAATTTTTGACTGAACAGGCGCGTTTGATTATGAAGGAAATTCAACAAGC TAGTCTTATATGACGAATGGTGCTTATTGTTATTTTTTGTTTATATTTAA GTTTTTTGTTTTAAGTCTTTTGTTATTTTTATTTAAGTTTGTTTTAAAAT GTTGAATAAGATTGTTTGGTTATGCCTTGTTAACAATTGTTTGAAGCAGC GGAGCAAATCTATATATTGAGCCCCCCCTCTCACATATAAGCACACGAAT TTTCGAAAAATAGATGTTCTGAGACTGAGAATCTGGCTCGAATGAATCTG AAAATTTTGCGATCTTCTTAACTTGTTTATTTGAGAAATTAAATGTGCGG GAAACAATGTTTAGCCTTGATTGTAAACTAAATTAATCCGGTTGTTCGGT GAAAGTAAATTATACCTTTGAAATATTCTGATAATTGTATGAAATTCTCA CCAAGTTGCCTTCCCTTACTTATTATTATGTTAAAATGTTTTATTTTTTT TAAAAATAAGCTTTAAATATGTTACAATATATTAGGAAAAGTAGGTTTCT CGTTTTATAATATTCTAGTACTGGCTGGTCCTTCTAGTCATAGTTAGAGA GACAAGGTATCAGTTAAGTCTAGAAAGCCAACAAAACTGTTTGTAAATTT TGTGGTAATCTATGCATGAAATTGATGAAAAAATCTAAAAATCTTTCTTG ACGCAGTGCTCTAGTTCGATTTCAAGTTTAAAGTCGTAGATTTTAGAATC TCTACGTTTGTTATTTTACAAAAAAAGGTTTTTAAAATGGACTTTTTATT TTAACGTTTTNCGAATGGTGCTTATTGTTATTTTTTGTTTATATTTAAGT TTTTTGTTTTAAGTCTTTTGTTATTTTTATTTAAGTTTGTTTTAAAATGT TGAATAAGATTGTTTGGTTATGCCTTGTTAACAATTGTTTGAAGCAGCGG AGCAAATCTATATATTGAGCCCCCCCTCTCACATATAAGCACACGAATTT TCGAAAAATAGATGTTCTGAGACTGAGAATCTGGCTCGAATGAATCTGAA AATTTTGCGATCTTCTTAACTTGTTTATTTGAGAAATTAAATGTGCGGGA AACAATGTTTAGCCTTGATTGTAAACTAAATTAATCCGGTTGTTCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062513TCONS_00062513Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062513-proteinTCONS_00062513-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_367supercontigscaffold_367:123638..129584 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.13 4.85 1.87 1.56 83.55 61.87 30.04 30.12 20.91 26.99 21.26 13.56 6.69 6.73 7.37 7.44 13.21 9.79 3.97 5.27 6.66 7.55 9.17 9.97 19.05 22.52 4.61 2.59 7.67 7.74