XLOC_039185 (gene) - C. hemisphaerica

Overview
NameXLOC_039185
Unique NameXLOC_039185
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_369:14078..23778+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039185 ID=XLOC_039185|Name=XLOC_039185|organism=Clytia hemisphaerica|type=gene|length=9701bp|location=Sequence derived from alignment at scaffold_369:14078..23778+ (Clytia hemisphaerica)
TCTACAGTGAAAAACTTTGACTTACgtcttaaaattttatttattttatt atttttagataatgaaaaaagagagagaaaaaaataaacaagaaaacAAT CTTTATAATGATTGATGACACCAGGAATGAAATAGACAAGGAATATGATT TGACATCAAATAAGCATAATGAAGAGTACAATATTGCTGGTACTGCAGAA TCTCCAACTAAAGGTGTCATGGATGGTGTGTTTGAATCATATGGTAACTC GCCCATCGAACCTAACATGGATGTCATAAAGAGTATTGAAGAAGATTCAA GTACAAAcgactttgaaaatgaaattgattttcatATGGCTGATACCAAT GAAAAGGTCATTGAAAACCTTCTAAACGATTTGGTTGATATAATTGTTGA AGCTGAGAATCCAAGGTGTAGAAAACAAACAAGTCTGGACAAAGCTCGGA ATAACAACATATGTACAACGTACCAAAACCCGACTTTGAATAAAGCTCCA AGATTGTTTATACTTGATGTAAATAAAAATAAGGATGAGAAAGAAGATGT CTGTGAAGTTGCAATTGCTGATTCTCTTCAAGAAATGTACAGAATGATCG AAGAATATAATTTGGAAACTGGTCAACGGTATATTCCTTCTCGGAAACGT TTCAGAAAAGGTATTATTCCTACTTTAAGGACTTCCTTTAACTTTCGCgg acagaaactttcgcgtttttggcGGTTTTGATCCTTTTTTGCTAAAgctt ctgccaggtaagaaattaaaccttaaaaacgcgaaagttttttttcgcga aaaataaactttcctacactcagttttgcactgtttgctaaatttttacg tgttttatgattttttttaccaaaaaaggtaaattttatatgaattcgcg aaagttctatctgtgaaatttcggctaaaaccataattcacgaaacttaa attcgctaaattttgcgactttttgacttcgcgaaactttctgcccgcga aacttTTTGCATTATAAGTATTTTTAACAGACTATTTAAACATGAAATTA TAGCGATTAAAATAAGCTCATAGCAGGCCTCACAACCAACAACTTtctgt ctttttttatttttggaatgagaatgaaataaagtatttttttattcgtt ttttttagaTTCACCGATAGACTTTTCAGAGCAATTACCCCTCCACTGGT ATAACAAGTTTCCTGTGGGAGTTGCCACGAGTGACCAGATATCTTCACGC ACAACCTTCAGTGGCCAGCTATCCTCATGGAGAAATGACTTTGAACTGAA CAGGATGCCTTACTTTCATTTTGGACAGTGTCGTTTTNTGGCCAACTATC CTCATGGAGAAATGACTTTGAACTGAACAGGATGCCTTACTTTCATTTTG GACAGTGTCGTTTTATTTGTGAATTTGGAAACAAACAATGTAAAAGAATA aatgtaaacttttttcttctgtttctttcaaaataattcttcaCAGACCA AAAGAGTTTCTTATTTGAGTCCGTTGTTGTTCTTATtgcttttccaaaat tttcaaatttatttaatCATTAATCGAAAATGAGCTTGTGAACTTTTGGG TCATTTTATTTATTCTATATACTTCTATATTCTTATTCAATAAAGCATTT TTTTATATTACAGCAACCTAAAGGACCCTTTTGCAATGCTTACGTTTACG tatcaaaatttatgtttttcccTGAATTCAAAGGAAAGGTTAGTTTGGTG TAGTGTTCCACTTTTTCTAGGTTATGATGATTGCCAATTCAAGCCTGAGA AAAATTCATGGTATTTTGGGGTCTTCACAATAATTTACAGTTCAAGATTT ACTAAAGTGCGCAAGTTTGAATTGAAATTGTGAGAAAGCTTTTGAGCAGA GGAAACAGTTTAAAAGTTTCTCAACAAAAAATTAACCAGTGATCCGTGTG ATCAATAATGATCTCAAAATCCCAATTTAGAATCTATTCACAACTCTTAT CATTTCCCGAACATTGAAGTGTTCAGTTCGTTCATTCATTTTGTTTTAGC AAGACAAGCTGTTTCCAGAGCGTTACTTTCAAAAGAGGCTAGAGAAAGGT GATGAAAAGCTGAACAAGCGGACGGTATACGTGATGTCTTTCCCAAAACT ATCAAGGCATCTGAACCACATTCATCATCCCGAAGATGAAAGGGTAAAGC TATAATATTCTCGTTCAATTGGTGATGTGCACCACTGCAatatcttctga cattacatcacggactcaatagctgattggttgcaagtgacgtaaaatca gtcaatacgtcactttcaaccaatcagctgttgggtccgccgaagacatt gcaatggtgcatatcatgaagagtgtttttttttaatgttttcttttacC ATTGAATACTAAAGATGGTTTATGAAAAAGTTGTTATACCAAGAATCTTC TTGCTTGTACAGAGGAAAACCTGAGGAAACTTTAATACANAGATGGTTTA TGAAAAAGTTGTTATACCAAGAATCTTCTTGCTTGTACAGAGGAAAACCT GAGGAAACTTTACTACGTTTTGATACTAAAATTAGCAAcctttttaccct ttttcagattttttttgcagaaaatgttttcatttcaattatttttgaac ATGCTTAGTGAATACGTTGAAATGAATTCCTACTCTTACACTCTAGCACA GTGCCACTATTGACCATCGTATCACTATGAAAATGCAGGATTTCAGTTTG AGAGGTATGACGTCAGAAGAAATTAGACATGGCGTCGACCGTTACGTCAA AGACGAAATTTTTCATAACAAGGAACTGCCAGATCCGTCGGATAAACGAT ATTATCCTCAATACTACGACGTTGGCGGTACCCGTCGAAGAGTATTCAGT CTTTGTACCATTTCCTTACCAAACATCGAGAAATTGGAAAGTCGTTTCAA AGAATTAAGAGAGAAGCAAGGGGCTGAAGTTTACTTTAAAATTGACGAGC CACCTATGGAGGAACGATTTCGAAATCGTGTTCAAGATATATGGGCTTGG GAGAATCgcaaaaataaaccaaaaccTGATGAGGGTGTAGACGTAGAAGA GTTAACTCAACGAATTATAGAACAAGATATATTGGAAATACGGAAATTTA ATGATGCGAAACCATGGCGACAACGAGCTCCTAGACCTTTATGGAACACA CCCATTCAAAAAGTCTTTTTCTTTCACCAAACTCGTCATCAACAATTACT ACTCAATCGTTATGGTTCCatggtccatttttatgaaatcaAACCACCTG AAAATCTGATCACCTATCGCGCTCTCATGGTttcattattcttaatttgt gTACGAACGAACGTTGACTATCAAGTTGTTGGTACGATACTTTGCAATAA ATACAACGACCATGTGAAAGTCTTGACAGAAGCATTGACTGAGTTCAAAG AGATAAATAGTTCTTGGAAACCCAAACATCTGGTGATTGACCCTACTGAA GCAATGGTTTCAGTTGTCAGAGAGCTGTTTCCaggtattattttttcaat ctcATCTTTCGctaaaattcgatttttgatcGGCAGACAAAATCTTCTCT TTTATTCTTGATCAGAGCTCGGACGATAAAACAGGAACTGGGTATAACTT TGATTGCTCCTTCTCAGACTTTGAAATGCTTGAAATGATAATTAAAAACA ACACTCCGACGAAGGGACCACAAAATCACAAATAGAAAATATCCAAACAG TCAAAGGGTCTTGATTTCGGCCACCTATCGCCTTACTTAATACTTTTTAA ACTGCGTACCCAGTGTAAAGAGACATTGAAAAGAAGTTTTGTATTGACAT ATGATTATGAATAATCACTCAAAAATGAGACAAGACAGAAAATCAGCCGT CTAAATTAAGGCTAAAGGGTCCCTGAATCGCTAATTTTTTTGTGCCGAAT TCTCCTTTATGACCTTCTTGGTTACTATAATCGTCATTCGTTTTTCAATT CAGAAattgaatctttaacctttagGTGTCGAGTATGTTTTCAATGGTGA ATCTTGTGTCCGACAATGGAAAGATTCTTTGAAACCTCATCTATTGAATG GCATCATCAACGAGGACACGAAAAAGTTGCAAGCAGATTTGAGGGTGATA CAACAAAGTTCTTCAATGGACGAATTTACTGACCGAATAGAAGATTTATC GGAATCAGAAATGTGGAATAATGAATCATTGCTGGAATTTCGACGATTTT GGTTCGCTCATACTGAGGTACCTTTGATCACCCATTTTCCATGCAATTCC GCCTATCGATTCATAATATTGAGATTAAAGCATATTAAAGCATCAGATAA TTCGTGACGGGAATAAGGGTCCCTGCAGCCTCCATTGATAATGCTGCATT TTTCTACAAGCTAACCGAGACctagtctgtacacagacccgatatctacg gtgaatttcaaaattcgtcgCCTTAGAGGGTCTGTTGGcattgtcttttc tgatttaagatttttcaaaccgaccgttGCGATGGAATGCAGAAAAACTG TACAGAGTAACGGGGACCGGGAAGCAAGACAGTTATAAATATAAGCCCTT TGTTAATATCCAGCGATGATTTGCTTAAAAATAGTCTTGAGTTTGTTACT AAGGGTATCCAGGCTGACTTTGTAAGATGAACCAATTTATGTAGAAAGAA AAGCAATATTCCGAAATTAACGCCATTTAAATCATGTCCGTTATATTGTG TATGGTTTCAGAAGCCATTTCGCTAGATAATATGGCCTATAAATCATCTA CGTTCTGTACCGTACAAGTCGGATACATTAGTTCTCTAGTGCAGGTTTTT CGTTTGGTGGGTATGTGTAGTCGGCTAGAATCAGtagcgttgtgggaaaa tttttctggaggggccaaagtcaattttttttaaatggcgccccccaATT TTCTAAACTCTTACTAATTcgtttgcctaggcataatgaggaaagaaata tttactggtaagagtagatatatctttgatgaatggaaaatggaaaaaca ggccccaccctggttggggccgactagaaaatttttgaaaatccactgcc aagataccctaaatcaccaaataaaaatagacaaatttgacacttgctag ggtgaaaagaaacttaaagaaataATGTGCAATGCAAGCGAAGCGAGCGa tgatgttttatgatttcaatattgttgtcagcaaattggtattggggcgc agttagtttttcatttaataatgatTCTATATTgtacataaaaaaaattg taagttagctagattgcaaagaatTTACCAATaaactttattgcgagcga agcgagtaattcaaaattatctcagtaagaTTGGTCCTGGGGCGCAATCa aaggcgcataaagtatgatttttaagattgggacgtttaaaaaatctctt ttggtgcTCCTTGCTCTTCGgtgccccttcaaaaaagctccgctgggggg cgGGGCCTCCCCTGTCCCAACGCTACTGGCTAGAATAGTTTGTGTAATCT CAGTTAAAGATAGTTGACTTGCTAATTCGAAATCGAAAAGGGAACctttt ttgttcaaattacagagagattcgaattataaaggTTTTAATAAGGGTTT CCCCTTAAAGGGGACTAaagaataagttcgaattatggaaagattcaaat aataagAAGTTCAAATAAACAAGAGTCTACCGTCATGTATTTTTATtcca tttttttagaaatgggTAAAATGTTGTTtccctcaaaatttaaattgCCT TCTTGAAGACGATTGGCTGAGAAAGATCACTCGGAATTATCAAGATCTAG TTTTGATGTCTTCTTACAGAAATGTTGCTCCGTTGGAGGGGTTTGAAGGT GGAATGGAACGTTTGTTATGTTATTTGACTGGTGATTCggaaaaagaaat ttacaaaAGGTCTGACAAATTTTATGTcttaaaattttagttttagtcAA AACTCGCTTTTGGTTTTCTCGGAAAGGCCTACAACCACATAAGCTTAGAT ACACTACAATTgatattttgtgaattttgatatgatttCCATGTCAATTA TGAAATAAACTTGTAGGCTTGTATATTTATTGGCAAAACATATACACTGG AAGCGGAGGCTTGAAgtccttttcttcttttctgattgggcttttccaga aaaaaaacgtataccccctgttgaggaggtccatttccattCCAAGGAGG TAAGGTTTGCTATGTGGCAGAATTCCATAgagagatacaaaaatctgtca aaaataactggaattcaatggggaagctttttaaatcctactaaaattct gaattccagaggggtttaagcctgaaattgcctggaattccagggggttg cagcatttccagccacgaaatgatggacctcctcaacagggggtatactg tttttttctggaattttaCTTACAACATTTTTTATAATCATTTCATGTTT CTCACAACTGCTTTTTTTTCAGTTACGTTCAAAAGAATCAAAGCCTGTTC ACTGCCGGGCACTGTGTTCTCAAAAACAGCAAATCTTTAGTACATAACTA CAAGCTACCAATCTTCTTAATGTCACATTGTCATCCAATACTGAGTGCAC CTCAACAAGTAGAAACACACATCCAGAAAGTTTCCACTCAAGAGTATACA GTCTTCGAGCTCAAAGATAAAATCCTCGATCGTTTTCATGTATCCCTTGG TGACCAATCGATTTTCCCATCATGCACTTGCACTGAATGGATCAACAATC CTTTACTCTGTCGACACATGTTTCAAGTTTTCAAGATGTATACACTCGAT TTTGAATCGATAAGTCCGTTGTATAAATCGAGTCCTTTTTTCACGATTGA TTATCTCTGTATCGATCAACAAGTGAGAAGCATCTCTACAGAGACCACGC AATCCTCGAAAGGAACGCAATCTGAAGAACGGCAAATCGTCAAATACCTA CCGCAACCCAtattcaaaacaatgaaaaatgttAACGATCATAGTATGTC CATAATGGAAGGTTTAAATTATTACATTGATAAACTTGCCAACGACTTCA TGCACGAAACATTTCGTAAAGCTTTTAAAGACGGATTGCAAAGCTTAGAA AAGAAGTATTTGAAAAAAGCCAAACGAGGTTCCACCAAAACGGTTTGTTT ACTTCCAGCTGTTCCGGTGAATGGTACACCAGCTTCGTCAAAAAAACAAG CTCAACAAACTCTAGTTGTGTCACTAAATCAGGCTGCTTCGACTCAACAC GAGACTACCAAAAAAACCGACCAGGCTCCTTTGATTCAACACGTGCCTGC TTCGATTGACCACGTAATTgtaaaatcaaccaatcaaaattcttCTGTTC AACATNCTTCGATTGACCACGTAACTgtcaaatcaaccaatcaaaaccCT TATGTTCAACACGTGACTGCTAAATCAACCAATCAGGCTCTACCGATTCA ACACGTGACTGTTTCGAGTGACCACGTAACTGTTAAGTCAACCAATCATG CTCCTTCGATTCAACACATGAGTGCTAAATCAACCAATCATGCTCCTTTA ATTAAACACGTGACTGCTCAACTAAACAATCAGACTTCATCGATGGAACA AGTGGATGAACAAGTTGCTgttcaatcaaccaatcagtcTCATTCAATTC AACACGTGACTTCTAAATCAACCAATCAGGCTCTACCGATTCAAAACTTG ACTGCTACAACAGTCAACCAGGACCCTTCGATCCGAACCGTGATAataat atcaaccaatcaagaTACCTCTAAGCAAGCTACTAAAAAACCTCAATATT CCTCCATACGCTCTTCAACTCTCACACGCACCGCAGACAAAATAGCCAGT TTCTCTAAAGTAAAACGAACAACTGAAAAACCCTCCTCAACATCAGTCGA TTCTCCTGAATTCATGAGCATCGACCTTCCCGAATTACCGACGTATGTTC TACACCCATCCTCTGATCAAATGGTCCCGACTGCGAAACCTGCCAAGCAG ATGGCTGTGTCTGTCAAATACTCCAATCAGCTAAATCCTCCAAAaaattc atccaatcagatcgcttTGTCTATGGATACATCCATTCAGAGCACTTCTT CCTCGAAAGCCAACAATTCGATTACTCCAATCTTGCCCACCAAGTCTGTT TCTTCTGTGAGACCGTCCAATAAGATGAAATCAGTTGCTTCAAACGGCCC GCATCGGCCGATCGATATTTCAGCCATATCAGCTATTCCCGGTGTTCCGA TAAAAGCACCGATATATCTTATACCGGTCACATCTGCTTCGGTGCCACAA AATAATACTGCCACATCTTTTAATAAAAAGCTTCAAAACATTGTCGAATG CTTTAAcgagaaaatcaaaaacaagacAATTTTGCCTAGTAATGGGTCTA CCAATATAGATAACGCGACTCTGAAGAATAATACCGATAACGGAGAGCTC CAAAAGCTCTCAAAAACACCCTCTGTATCATTAGAAAACAATGTTGTAAA AGAGCATACTAAGCCAACCAACCCAGGGCCAACTTATCCAACGCCAGGTG TCAAGTTACAGCAGTCAAAAGACACTATATATCGTCTTTTACGAAAACAA TACGGAGATGCTATCGATTTACGAGAATTAAACGAATGCCACTACGATTC GAAAACAATcgataaaattacaaaaaatcttCTCGAACGTGACAAAATCG CAAACCCAAAAACCCCCGAAACTGCATCTCAGCATCAAACAACTCCTGTC CTACCCTCGAATTATACCATCGATGTATCAGGCCGTAAACCAAACAAAGT TCCGATCCCTTACCGTACTACAACTTCTAAGATAACTTCGCCCCCTGCTT TTCCTTCTCCTCTCTCAAGACTGAGAAGGTTGGCTCCTAAGCCATCAAGA TATATTCAAATGGAAGCTGCAAACATGAAGAAAACATCAAGAAACACACC CAGAACGAGGTCCAATCTAAATTCACAGATTTCGGTTTTCCGAAAGAAAA CCTCCTTGGACAAGAGGAAGAATGGTGATGAAACAAACCACCCATTGATT CCtcataatgaaattaaaaccgaaaatttctttgatattgaACGGAGGGA CAACCCTTCTCCAAGAAAACAACACGACTTAAGTTTACATTCTATTCAGA AAGAAGCATTGGAAAAGATTTCAAGTTTGAAACGGTCTTTGGACGAAAGT CTACAGAATGAAATTGTATCGTTGGGAAACGGTAACGCAAAGccaaataa aattatgaaaagtaATACGGAAACTTCGTGAATATTATATTTGTGATTGA TAGATAATATATAGATTAATTACTGTCCATTTGAAAGTTCTTCTATTACT CACAGTCNGATTGATAGATAATAATAGAATAATTACTTGAATTGTTCTTG AAAGTTCTTCCATTACTCACAGTTTGCTTATACTCGCTAGTCGCTTGcta ttttaagctttttgttaaaaatcttGTACTTAGCAAATTTTGACCCCCCG TCTTGATAAAATGCTGGGGAAAGCTAGTAAAAACACACAAGTATTCATTA ATTTAGCATTCTTGAGTTGACATTTTTAGCTGTAAATATTTTAACGTTAT ACATATCCATATTATGATTATGTTTATAGTAGAGCTTATTTATTATTGAA G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062535TCONS_00062535Clytia hemisphaericatranscript
TCONS_00062536TCONS_00062536Clytia hemisphaericatranscript
TCONS_00062537TCONS_00062537Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062537-proteinTCONS_00062537-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:14078..23778 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.18 2.26 1.2 0.73 10.88 7.91 6.48 7.18 2.9 4.94 5.21 3.25 3.02 2.23 2.22 3.34 4.11 4.4 1.64 2.08 3.11 3.45 1.7 2.54 5.69 6.21 1.36 0.86 1.42 1.29