XLOC_039291 (gene) - C. hemisphaerica

Overview
NameXLOC_039291
Unique NameXLOC_039291
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_371:585179..588986+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039291 ID=XLOC_039291|Name=XLOC_039291|organism=Clytia hemisphaerica|type=gene|length=3808bp|location=Sequence derived from alignment at scaffold_371:585179..588986+ (Clytia hemisphaerica)
ATATTAAGCGGTACCTTTGTAGTATTTCTTTGTCGTAAAAAGCACCTGCG
AGGGAGCTCACAAAACACAAGATTTAGACTAACACATCAGTCTAGTCTTA
AATTCTTCTCCACAGAGGATATTCTTAGATTTAAATCTGATTTATTCACG
TCTCCGTCAAGAAAAGATCATTCAGGAACATAAAACGGTAGGGTTATAGG
ATGTCCCCCCTGGTCCCggatatcaaaacaaaccttttcaagACAGGATT
CTACATATCCAGGGGGTAAGTGGTGAAGTCATAAAGATGTTCAAAACCAC
CCGCTTTGTGAAGAGGTGTGGGAAATAAAGAGTCACTAACCTAGCGCCTC
TTTGTGCAATGGAAATTGATATTTAATTAAACCAGGGGGTCTTTTTCCGA
TCGAAAGATATCCTGTAGTTATTATTTCTTCACTCTGAAGAGAAtcgatt
tatttttgaataaataaaataaaggtGTTTTGCCAAACATTTAGTTGGTC
ATTGGTGTAGGTATCCAAGGTCAAAATCTTATCACATTCAGACATTTATT
TTAGCCTTCTGTCTATATATTTTATCTTATCTCTAAAGAGATTGTGTAAC
AAGGGTGCTGTGGTTTGTAGAGGGTTGTACATAAGGACCACTTTGAGTAC
TTGGAATAGAAATCGAAATCTATTTGGAGAAAACCTACCTATTGAAAATA
TAAGctctaaataaaaaatgttttcgatTTATTTGACCTGGAAATTTTCC
TAGACTCATTTCTTTTGCTCTTGTGACCTAGAAGTAGTGTGGTGATGata
atcttttttgaaagtagGCTGCACAAATTTCGGAATAGTTTTTGCAATCC
GCTTTGGAAAACCACTACACAAAATCTACTGACGGGATTTTCGAGCTCGA
TATGCATAACCTATAACAAAACATTTTGGCGATTTATATAACATAAatac
aaattttgaattcaaattaaATAGAGTGGGTAGGCCAGCTGGTGGATGAC
GGGGTTAGTTGGCAGGTGCGCTACTTGGAACCCAGGGGAGAATAATAATA
CCAATTTCAAACCAATATCATTTTGTCTATTGATTTCATATCCTTTATTC
TGATTGAACAACTTCTTACAACTCGTAAAATCTGCATTTTCGTGGACTTT
GGTGAAAAGACGTCGATGAAGATGAATTCTAAAACGAATTTCAATGAATT
AAAGTGGGTAGGCCAGCTGGTGGACGGGGTTGGTTCTCGGGAAAAAtaac
ttcaaagaaaaattttataaagcgaatttcaatgttttcttaTTACAGGA
CATCACTAATAACTAAATCCTGAAGAATAAGATTCAAGACATCATCGATA
TGTTGGATTTCAtgagaattttgttttgtttgggaTTTGTTGTAGTTGCT
GTCATTGCAGAAGCTGAGACTCAGGTACATAATTTTCCGCATCATTTCCA
AACTTACCATCATTTTGTATATAAGATTTCCATTTCTGCACTTAGActcc
tttgccacttttctatGGGAAGACTCCGGGTAGCTGAAAAATAATGAGCT
TTATAAAGTTAAGCGCTATTAGTATCATTCACAAGGGAACTAAGGggctg
ggttcgagtttgtgaatccgttagtggatgcaagTAACCTCGTAGGGTTT
TTGAGATAGTTCACAGATGAATTTCCGTTATGTCGACATACTCTTTACCG
GAACTTTTTACTGGTTTTACTTTAGGGTTATGATAGTCAGCAGATCTTCT
AATATGGAAGGTTAAGCTGACGCAAATTTTTGACCTCTTTAAAGATTTAT
ACTCCTTAATAACGGGCTAAGTCATTAAATAATTTCGATTAACGTACAAC
TTTTTTTCACGCCAAAGGATGACAACTTAGCCAAGCGGGTATCCCATCAA
ACTCATATCCCTGGGGACAAGTCACCAGGACGTAAATTTATTCTTCACTT
GCGTCCCCATGGCGATGAACAAACAAAACAACGAAAGATGCTGCCCCTAA
AGCGAGAAAATACTGCTGTCCCTGCTGGTGATGATCTTTTTGCATCACGG
TTTGGTAAGGAGGATGAGGATGCTGCCGAGTCTACGTGGAGTGCCTGGAG
AATGGGACGGGAAGCAGATACTGTGGACACCACCAAGAGGGTAAAGGATG
CTGAGTCAGCATGGAGTGTTTGGAGGATGGGACGGGAAACGGATGGCACT
ACCACTGTAAAGGACGCCACCACGAGGGAGCGAGATGCCTCTATCCCCAG
CCATCCAAGATATCAAGTATTTAGGTCAGGTCGAGAAGCCGAAAAGTCGC
TTCCAATGTCAAGAGCATTTGGTGGAAAAAGGGATTCACCCGGCGATGCT
CCTATTCCTTATTATTACTCATTCAACAACGAAGGAAAAGATTTTTCGTG
GAACATCTTTGGTAGAAAGAGAGCAGCTGAGTCCGATCTTCCAATGTCCA
GATTTGTCGATGGTCGAAAGAGGGATTTACCCATGGGAAGAACGTTTTCC
AAACGGGAATCCAACCGCATGTTTTCTCGTGCCGACGTTCCGTTTTTCGT
CAAGCGAGGTTCAAACCTACCTATGAACAGAATGTTTTCTCGAAGTGCTG
TTCCATACTTTGGAGAAGGAAAGAGAGAATCGAATCATTTGCCAATGGGT
attttttcaagagaaaaaacCAACGCTGATGTTCCGTTTTATGTAAAACG
TGCTTCAAGCCTTCCTCTCGGTCATATGTTCTCCAAAAGAGCCAATTTCC
TCAACAATCGCCTACCAATGCAACTTGGATTTAAACGAGCCTCAAATCTA
CCAATGACCAGAATGTTTTCCAAGAGGGCGAGTCTACCAATGCTACTTGG
AGTAGTCAAAAAGGAGCATGGTGGATTTGCACGAGCACCTGAATACAACT
GGGGTCCAGCTTCCTTGAAATATCACCGCCGTAGCCTCCTTCCAATGATA
ATGCACGAAAGAAAAAGACGCTTCAATGGATTCAGACCAGTCGTAAGTGG
AATTATCAATAATGACCGAAACCgtaaattgaaaaacaatgtCAATGACT
TTCATGTTAAAAAACTTTGAGTATAATCCCATACGAAGCCTTTGGATGGT
ACACTGATTTCATGATCAGAATGAATATAATGGAAACTTTAgatgttatg
atttttattATTTCGAAGTTAGAGTTTATTACGATGTTGGAGGAAGTGCG
TCAATGCGCTACATAAACTATAGCCCGTGGAGCCAGTTTCTCAATCACGg
caaagcaaaatattttgattgcagtttttttgaaagtggacGAAAGCGCT
ATATCTACTTGTCATTGTCTACAATGACTTTTGTGTGGTTAccgctttca
aaaaaaactccaatcaaagatggcggatatagcttggtccaagGTCTGTT
AAAGGTCAATCGCTACATAATACCAATCATAttccaacctcgttccctgt
gtattatcagctttttgatgcctactgatagcgctagataatattctcCG
GCGTTCATAGGTAttataaataaagcctggggtacacggggacgaggttg
agttCTATTAAGTTCTAAATCAAGCCTCGTGTTctcaaattattcttata
atagaaaaagctaaaaaaatcgTGTTGTAGGATTGAAAAATGATGAATCT
CAAATATTTGTTATCgtaacattttcataattttcgcatgaaattttagg
ttttctcatttttacttATCATCTTTGTATGTGTGACAAATTATAGTCCg
tataaatattttcttaataAAGGGGTAATGAAttaaagaaatatatttta
tgtttatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062707TCONS_00062707Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062707-proteinTCONS_00062707-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:585179..588986 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.26	1.04	0.51	0.59	1.29	0.78	0.39	0.33	4.1	3.98	2.2	3.6	9.24	7.7	0.31	0.35	5.79	6.04	40.28	55.11	13.81	14.11	2.63	3.73	3.35	5.02	0.36	0.14	0.17	0.27