XLOC_039342 (gene) - C. hemisphaerica

Overview
NameXLOC_039342
Unique NameXLOC_039342
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_372:80314..82202+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039342 ID=XLOC_039342|Name=XLOC_039342|organism=Clytia hemisphaerica|type=gene|length=1889bp|location=Sequence derived from alignment at scaffold_372:80314..82202+ (Clytia hemisphaerica)
ATAATTATCATGCATGTAAAGATAAAGAATTTGGTGTCTATGATACTGTT
AGTAAAAACAACATCATAAACAAAACCGCCTTTGCTGAGATTGGGTTTTT
GAGTTGGAAGGgtgaaaaattgatttcaaatcaattcggAGAATTCAAAA
GGGGTATTAGTGGTTTTCAGGCGAAACGATCCACGAATGGTTTATTTGTA
CGAAAGAAAACTGGGAAATATTCGAGTGTTTCACTACTTTATCCTAAACC
TATGGGGTTTGAACAGGTAAATCCATCTGGTATTATGTTATGATTTTATA
TATATTCTCCTAGAGatgcaaaaaaactttcaattgtGTTGTGGGAAAAG
ATTTTGTTACTATACGCAGTTTTTATGATGATAAATGTTTTTTGTACAGC
tcgaatgaaattttcaatacaAGGTTTTTCGATACATCAATATCTTTTTA
TATAAGTTTAAAATCAACATAAATTTGCAATGGAGAAGCTAGACTTAGGt
aggtcggtttgaaaaatccatttCTCCGTTTTTCAATTCAGATCAAAGGA
GTAATTTATGGAGAAAGGTCAAGGTGTGATAAATACAACATCTCATCTTT
TCATCTGTTTCAAGGAAAGTCAAGACTCGTTAATCTCGGTAAGTTTATTC
ACTCACAGGATAAGAATCTAACTGTTTTAGACACTTTGGTAAGGTACAAA
TTTATTCCGGATTATAATTTCCAGCGTAGTGttttaaaatgaagaaaaaa
aaatagaccTTTCACAAATAACATCAACTTGCATCGAGTTCGAAGTAATT
TTATGACAACTTCTACCTAAAAGATTATTTCAATTGCGCAATATTTTTTA
TGTACCATAAatatcacagctcgaataaatatcGACCTCTGAAGACGAGG
TTTTTAtaatacaagatcttgtattaaAACGCTCGCAAAGTAGATATATT
TCAGCATTTGGCTTAGATGAGGCTTGTGAATCATGTTTGATTTGCTTTTT
TAGACAAGTGgtgagaaaatgaaaacttggcctctggtaCCCAGGGTACT
TTTTATTATCGTTTCAAATTGACGGAAGTGTTGGGTGATTTATCTCGAGA
AGTGTGTATTAGTTACAGTAATTTCATAAACCATTTTTCTCTAGATCTTA
ATCAATTCACCTTAGTCAATGCAACATCAAACTTCTGGGATTTGGACAAC
AtaatcaaattaaattcaaatcaaatcaatcttctTAACCAGTCAATTTC
GAACCAGACTTTCCAATATCAATACTGGCGAAAGAAACAATCAAATATTA
TTGGAAACTCAGACGAAGTAATTGATTTGGTGACAAGGTCTGTAGAATAT
AAAGGGAATACATTTGGTGTGGCCAAAACAGATGCTTCTAATTATATCAC
ACTGGTACCACTACTGTTTATTAAACGCTTTGACCAGGATGGAACTGGTG
GTGATGGATATTCAAAACTGGAATATCGTGTTTACGAATATAACGAAGTT
TTAAACCAAACTCAAACTGATATGATTAATAAATTGACTAAAACATTCGA
TTGCAAAATATAATACACAGCAAGCTCGTATCCAGTTCCTTAGATCGCTT
GTCTGATGATTCGGATAGTGTTAACAAAATGTTTGTAAGACATCCATcag
taaatcaaaaataatgcaAGTGTCACTGGGTACGGGATTGGATACACAGT
ACAGTTGAGATATAAAATtcaaatacagggtgtccggaaaaaagtatCAA
GCTcaaacatgattctgagtagaaggtttttgcgtgtgtttaacaaaatg
taacaaatatataccaacacaataattgtttttacaacattCATTGTAAA
TTGATTAaaataattaactttttttacaattttcatgac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062792TCONS_00062792Clytia hemisphaericatranscript
TCONS_00062793TCONS_00062793Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062792-proteinTCONS_00062792-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_372supercontigscaffold_372:80314..82202 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.06	0.07	0	0.05	0.04	1.43	1.09	0.39	0.21	0.08	0.29	0.04	0.09	0	0.04	1.78	4.98	0	0	3.61	3.8	0.08	0.41	0.21	0.06	0.18	0	0.15	0.07