XLOC_039394 (gene) - C. hemisphaerica

Overview
NameXLOC_039394
Unique NameXLOC_039394
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_373:99865..103249-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039394 ID=XLOC_039394|Name=XLOC_039394|organism=Clytia hemisphaerica|type=gene|length=3385bp|location=Sequence derived from alignment at scaffold_373:99865..103249- (Clytia hemisphaerica)
ATTGGAGAGTTTTATCACCAGTTTCTTTTTAGATAAAGTATTGTTTTTCA
AAAATAAAAAATATGAAAAAAGAGCTGTTTAGAATAAAAGAATCANGAGA
GTTTTATCACCAGTTTCTTTTTAGATAAAGTATTGTTTTTCAAAAATAAA
AAATATGAAAAAAGAGCTGTTTACAATAAAAGAATCATTTATATCGAGGA
TCTAAAAACAGGATGTGACCCGTTTTATAAAGGATCAGGAAGCGAATTTT
GCAAAACCAAAACTTATAGCGATAAAATTCTCAAATTCAAAACTAAACAG
AAATGATTCTTGGTGCTGGAGCACTTCACCTAACATAGAGACTAAACAAT
GATAATGAAAATATTGTTTTCATGATTCAGCTCAAAATGTATAAAATCTA
ATGAAAAAATTGACTAAGTATTGTTATCTAAACACAGTTCCTTGCATACT
ACCAGGTCCAATTGAAACTTGATCAAGCACCTTCAAGTGATGTGGATTAT
ATTGCTCAATTCGACCTTTCAAGATACTTGGACCAAGAAACTGGCTGAGA
AACTCGAGACAATCAAAAGCAGCACTTTTAGTTAATGCACTGTCACATGT
TGCTGACTCAAAAATGAGATCAAAGAACTGTTCCAGATATTTCTTGAAAA
CACGTTTGGTCAATCCTTTGGCGATATTTGGGATGACTTTGTTGATGGAT
TCAAGGAGATGCAAGTAGTGGGTGTAGTGCTTATGAGTTGCTGCTTGGAT
CATGATAGGAATGTATTTCTCCACCCTGGGTACGGCAGCAGGAACACTTG
ACATCTCACTGAGCAAATAAACACAACCATCGACAGCTTCCCATGGTTCT
GCAGCTCGTTTGAATGAATGATCCATACAACCACCACCACGACGCCCCAT
TTTTGGTGCCAGTGAACCACAAGAATACATTTGCTGGTTGGAATGTAGTT
CTAAATCATTATCTCTTAGTTGTTTGATAACACCATACGTCGCAACGCCT
TTATCCAAGCCCTCATATCTCTCAGAGCTAGATTTTTGCTCCTTGATACC
GTCAAAGTCTTTTGAGACTTGATTGAAGACATACTCAAGAGCTTCTTCAC
CATAAGCTTTGGCGACATTGGTCAAAGCGACAGCCCCTCCCTGGCGAACT
GATGGGATAGGATCGTGGAGATTGTGGAAGAACAGTGGGTAGAAAGTGCT
GAGTAAGGATTTGCTCTCATCTGGAAAGTTCAAGATGAAATTACCACAAG
CAACACAAGCTGTATCTCGAACTGGCCAACTCTCATCTTGAAAACAAAAG
TGAAGTGCTTCAAGAAGTCGTGGAACATGTGGTTTGACTACCTCGTTATC
AATTTTTGAGCTCAATTCCGCCATACAATGACATGCTGCTTCACGTACCG
CATGATTGTCACTCTCTGTCTGTTTCACATAAAAATCAACAATTTCTGTG
ATAAATAAAGCAACATTGGCACGACCCTGGGTTCCCATGATCAACTTCCA
GGATTCTTGGTTGTAAAGCTTGACACCTTCAGCTAAATAGTAGCGATTCA
AACACATAGGTGGCAAAAGAGTTTTGAAATATAATTTTTTATCTTCATCT
TCAAAACCCTCAAAGAACTGACGCGTTGCAACAGACGCAGCAAGTCTGAC
TTGACTCCAATTATCAGCCAGTCCAACATAAAGATGTTGAGCAAGTTTCC
CAGCTACGTCATTCTTTGATCCATCTTTTGAAGACACACCGTATCGTGCC
AGTGAGGCGCATAGATAATAACCAGTTTCCCGAACAAATCGATTGGTGTG
ACTCAATGTATCAAAAATCAAATCAAGCAGATCCATATTAACGAATTGAA
GAAAATGTTCACCACAACCTTCAATAATGGATTGTAAACCTTTCATACTG
GTTTCCAAAGACTTCCATCCAGCTGTATCATGAAAGATATCTTTGGCATC
TTTATGATCATCTCCATTTTTAACATTGTCCNGCCCCTCCCTGGCGAACT
GATGGGATAGGATCGTGGAGATTGTGGAAGAACAGTGGGTAGAAAGTGCT
GAGTAAGGATTTGCTCTCATCTGGAAAGTTCAAGATGAAATTACCACAAG
CAACACAAGCTGTATCTCGAACTGGCCAACTCTCATCTTGAAAACAAAAG
TGAAGTGCTTCAAGAAGTCGTGGAACATGTGGTTTGACTACCTCGTTATC
AATTTTTGAGCTCAATTCCGCCATACAATGACATGCTGCTTCACGTACCG
CATGATTGTCACTCTCTGTCTGTTTCACATAAAAATCAACAATTTCTGTG
ATAAATAAAGCAACATTGGCACGACCCTGGGTTCCCATGATCAACTTCCA
GGATTCTTGGTTGTAAAGCTTGACACCTTCAGCTAAATAGTAGCGATTCA
AACACATAGGTGGCAAAAGAGTTTTGAAATATAATTTTTTATCTTCATCT
TCAAAACCCTCAAAGAACTGACGCGTTGCAACAGACGCAGCAAGTCTGAC
TTGACTCCAATTATCAGCCAGTCCAACATAAAGATGTTGAGCAAGTTTCC
CAGCTACGTCATTCTTTGATCCATCTTTTGAAGACACACCGTATCGTGCC
AGTGAGGCGCATAGATAATAACCAGTTTCCCGAACAAATCGATTGGTGTG
ACTCAATGTATCAAAAATCAAATCAAGCAGATCCATATTAACGAATTGAA
GAAAATGTTCACCACAACCTTCAATAATGGATTGTAAACCTTTCATACTG
GTTTCTAAAGACTTCCATCCAGCTGTATCATGAAAGATATCTTTGGCATC
TTTATGATCATCTCCATTTTTAACATCGTCTCCAGGAATGTCTCTAGTCA
AGTTCTCCTTGATACTAGCGATCAACTTAGGTTCACATTTTCGGTAAATG
TTAGAATCAATTCGGTTACAAAGGGCCCCTAATAAATCACCAGCAACTAT
ACGAACCCTGAATTCTGGATTTTCCAAATAAGCGAGACCAATTGTTAGAA
AAGTGTCAACGTTGATACCAGAACTGTCATCTCCAATTGACTCAATTAAA
ATCCGTGATGCCTCTAAATGACCAAAGATCTCTTCCCATGTTGATCTATT
CCGTTCATCTGACTGAAGATATGCCAACAAATAATTTTGTAACTTCTGAA
ACTCTTCCTTTGATGATTCTGTATTTATTTTATTCTTTTGTAAAGCAACT
TTGAAACTTAAAGCTCCTTTATCTCTGTCAAGTTTAGCATGGCTACCAAG
TAGTTTCAAAGCTGCTGTAAATGGATCAGTCATAATTTCTTATTATTTCT
TAAACTAGAAATAGACAAATTATCATTTATGATTTCACGTAACAAATTTT
CACAACGTGCAAAGGTTTGAAAATGTTGTCTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062904TCONS_00062904Clytia hemisphaericatranscript
TCONS_00062903TCONS_00062903Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_373supercontigscaffold_373:99865..103249 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.97	23.89	7.86	6.13	36.81	27.29	34.66	38.07	25.19	32.67	19.9	13.4	15.83	13.29	18.89	24	36.08	27.42	8.7	9.74	20.19	21.62	42.31	40.13	16.72	19.64	19.94	15.62	30.5	30.92