XLOC_039446 (gene) - C. hemisphaerica

Overview
NameXLOC_039446
Unique NameXLOC_039446
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_375:321689..330343-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039446 ID=XLOC_039446|Name=XLOC_039446|organism=Clytia hemisphaerica|type=gene|length=8655bp|location=Sequence derived from alignment at scaffold_375:321689..330343- (Clytia hemisphaerica)
CCAGTCCAGTTCACTGATGAATCCATCTTTCTGTCTGATTGTTTATGGCT ATGGTGTGGTGATGACGCTTTTGTTTGGCAGTTCTGCCTGGTAACTTCGT CTGGCAGTCTGAAGTCTTTCTTAACAAATCTGTTTTGTTTACATTTTTGA TCACTTTTTTATGTGCAGGTTAATACGGCGACGCTTTTAGGTTAATTTCT CGAACTTTTGTACCCGTAAACATCTACACATAGTATAATGACTTTATTTG TTTGACCATCATCCAGCATTAAAGCTCTGAGATATGACTCAATAAAGGTC AAAGTGCTCACATGTTCACCGTTACAAACTTCGGGTAGAGAAAGCCGCTT CACACTTTTTCGGCTGACCGGGCCATCATCACCATCATCCCCTAGGGACA AAATCCTAACTCTAGGCAAGAATATTCTTTTTACATCAAAATTTTTAGAA CAATTATGGACTACGGAAGAATTGCTAAGATAGCCGCTGGAGTTGCTGGC CTATCATTTCTTGGGTACTGCATTTACTTTGACAGAAAAAGAAGAAGTGA TCCTCTTTTCAAGCAAAAACTCAAAGAAAGTAAGTAGTTTCTTTTTAGGT AATAAAGCCTACACCACAAGCTGTTTCTTGCGCCATTTCTGCAACTTTCA AAATTGTTTCCATATCGAAGTCTAAACTTAAACTCCTATATCAGGATTAG AAACTAGGCTAGTCTTACCTCTTATCTTTCCCTCCTTGCTTGACAACAAA TACAATGCTGACAAGTTGACACAACACATGTGTACATGTACATTGACAAG TAATCCCTGAGAGAAGTTTTTATAGAAATCTGCAACAAAAACGAAAGTGG TCTATCTCTTCTACTGATTGCTTCCCAGAGCGCTCCTTTGCTTGCAGCCG TTTATCAAATTTCCACCAATGATAGGGTGCGCACTCGTCGGGATTTTTTG CGCGGAACGAGGAAGAATTTACAAAAATGAACTTCAAGGCATTAGTACTT ACCTTTAAATCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTTTCCAGCTCATTATCGATAAGCTAAAGT TTAACAGTCATCGGGCCGATTTTCAGACCGCGCCAGCAAAACTTCTCACG CCCCGCCACGTGGAAGACTAGATTTCATCCGCCATTTTTGGCGCGATTTT GGTGCTTCCGAAAATTATTTCTTGCTGGCCTGGTGTAAGGAGGCGATTCT TTGAAAAGGTGGTTTTTTTGTGGTTTGAAAATGGAATAACTTTGGAACTA CTTAACCAATTTTAACAAATGACCCCTCATTTTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCAAATAAAATTAGTTTG GTTTCTAAAAATTGAGGGGAAAATTTTGGCCTGTCCACCCTACCAATGGT GTGGCGGGTAGACAGGAGACCCGTCGTGTGTTTTTTTATAATATGATGTA CACAAGACGGGTTCGAGCTGTGAGTCCAATATTGGACTCACATTTTTTAC AGTGGGAAATTCGAATTTAGCGCTGTCCTCACTTACTAAGATAAAAAACA AATTTCGGAAGTTGCACTTTCTCTAAGAAAGTGTGACCAGTAAAAGAATA ACAAAATTTGATTGGCTACGTTTTCAACCGTTATTAGGATCTGAGAAATT CAAACTCTCAGCCTATACCATGCTATACATTTCGCCATCAGTTTATCAAA GAAGAAATCATAGCACGGATTCCCAGGCTATGTGGCGGGGTGTGGGGAGT TTTGCCGGTGCGTGGGGAGTTTTGCCGGTGCGGTCTGAAAATTGGCCCAA AAACAAATTTCACCACTAGAAAGCTGAAATCATCAGCTTTCAGATGGATG CTCTTAGATCGGATGGCCAAAAGTTACCTTCATTTTTTTATTTTATTTTT TTATCCACGGATCGTTGATAGTCACCTTTCCGGGGGTTTTGTTGTTTGGA ATTGCTTAGGTCAGGATTGCTAGTAACGGCTTGTCACTGTGCCGGGTGCA TACTCGGCACCTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTTATAATAATATTACCCCCGTCTTTTGCCAGTTCGGTATA ATATGTTATGAATTGCGTGATTTTGCTGTGCGGCGATGGCTCAACGGATA GAGCACTGGTTTCCGAACCTGATGGTCTTTCTTTGGTGGTGGTTCGAATC CCACTCTGTGCGAAAATTAGACTGGTCGAAATTGATGGACAAATGATTGA CAGGTATGAAAACTCAGTCAGAAATGAGAAACTAAGTCTCAGAAACTCAG ACAGTCAGAAAAGAGAAAAATAGGATTAGAGATAGGAAAGAAAAGAAGGT GACGATTGACCATCCGATATAACATCTACCCTTTCAGATGGTGTATGGCG CTTAAAAATGAAAAAATCTGCAATCTTGTTAAAAAATCACAATTTCTTCT ATTTTTCGAAATTCCAGACAGCCTGTAGATTTTCAAATAAAGCGTATTGT GATAGATTTTAGCCTAATCTTACCCTGGGTTTACTAAAAAACCACAATTG AAAAGATGAACCAGCTCAATAGCGACAGCCATTTGTTTACATAAAACATC AATATCTATGGAAAGAAAATAGATACCTGGATGCAGTTCTTTTTACTTGT TTCCCTGATAATTCCTGATTGATTTAAAAAAAAGAATGAACAGATATGGA TGATTTAAAGGTAAGTACTACCATGAGTGGTCATAAATCCGACAGCCCTG CCTAAATCCGATCCCCCAAATAACTGCTATGAAAAAAAATTACTTGTTCA CAAACATTTCCTCTCCAAGTTGAACAAAAAACTATTGCAAAAACTCTCGA AACAAAACATCTAACAAGATGACTATAATGTCAAGATGTCGTCAATTAAT GTGATCAAAAGTGTGAGTTGTAAAAATAATTACCTCTATTATTCTACTAT TCTGAATCTGTTGCTCGTGTTTAAAACATTAACAATTTTGTAATAAAAAA ATTATGTTTTGTATAAGAAGCAATTATTGTTATTTGGTTCAATTCGTTCA GTGTATCAAATCTTTCAAGCTTAGTTGACACTTTGGTATCTTCATTGTAT CACAGCGAAAGATTTGTTTTTATTTTAGTTTGTATCTTTAAACGACCCCA TCGGATTTAGGCAGGGCTGTCTGATTTAGGACCACTCAAGGTAATGCATT GAAGTTCAATTCTTCCTCGTTCCGCGCAAAAAATCCCGACGAGTGCGCAC CCTACCAATGAGGTTGCCGCATTTCAAACGGCCCTTCTTTTTGGCACCCG TGGCCTTTCAGTGCCTTTCACGACGGGCGGCCGTAAAATCCCACCCTTCA TATATTTGTTTCAATCCGTAATCCGTTAAAAGGACCCTCCCGGCGCTCCG GAAACGTCCATAGCAAAAACAGAACATGTTAAAAATCACTTGCTCCGGAA GCACCAGAAGAGCTCCGGAACTTTCCGGAGAGAAAAATAGTGTTTTTTCA GCTGCTCCGGAAAACTCAAGAAAACTCCGGAGCGCCGGGAGGGTCCTGAG TTAGATTGGGTCAAGTTGAACATTTTACAAGAATTTTTGTCATTGGATTG GTCGTTAACTATTCAAACAAAAACTTTTATTATATTTTTCTAAAGAATGC GTCATTTCTATTGTTTTGAATAACCAATTATGCGAGCATCTTATAAAAAC CTCAACACAACTGCCAGTAGTATATCTAGGAGCATGAATCCGTAGTGGGT GCCAGCAGCCTTATANTGCGTCATCTCTATTGTTTTGAGTAACCAATTAT GTGAGCATCTTATAAAAACTTCAACACAACTGGTTAGATTGTCAACAAAG TACCGTAAAAAATCATTGAATAAAAGAAGAACTTAAAATCTTAAATATTT TCATTTTGAAGAATAGGTGCAAAAAAAGTGATTCATAGAAAATTTTCATT TTTCATTGCATTAAATCGAAATAGGGGATTTGGAAAATTTTCTATGTTTA GTTTTTTGCACAATAAACCCCTGTAACTATGGGCGAACACCCCGTTGCTA AGATGTTGGCTTGAAATCAAAAATGAAACCACTCAAAACGAAAGTATAAT CGGCCTGTACTCGAAATCCTGTAATCTTGATATACGAGTTTAAGTGTATA CTGCATATACTGTTTAGGTATCAAAACTTATTTCAGTTAGGAACATTTGG CGAGTTTCTGTACACGACCGCAATAAGCACACGTATAAGCACACTGCTTT TAATTGGCTGAAATTTGTTTTCGCTTCAGAAAAACTTTTTAAAACTTTCA GCAATGATTGAACTGTTACAATGAAGATTATCCAGCGCAATTTTTATCTT CTTACTTTCTCCATCTTAATTGAAGCACGAGGTTTACTGAAGTTAAGCAC ATAAGATATTCTTATACTTACTGATATTCACTGAAACATCGTTCATTGTG CACTGCGGTGGAGTGCATGATGTAACTCACACGGCAACTAACTCGCCTTC TGTTAGAAGATCATATTGGGCGTTTTGGTATTACCACCCTTAAAGCAGCG GGCTCTTTTTGCAACTCTTTCCACCATTTTAGATGGCCTTAACAATAGAT CCAAAGCAAAAGGGCACCATAATCTTGGAAGATAATTTGTTTTGGTCTCC GGCTTTAGGAAGTAGCAATGTTTTTGGTTGTTTACAAGTGTCATGTAGTT TTTGCTGGCTTATAGAATGGCAGGATCCTGGATGGTTTCCCTGACAGTCA AGAACAAGTGCAAATCAGGATACCTTTGGCAATCTCGAAATGCAGACACA TAAATAATTTACATTTTCTAATTATAAGGACAAAGACTAATCAATATCCT AACTGTTTTCTTTTTGTATTATACTACATGTTTTTTTATGATATTTAATT CCCAGGTCAATTATATCTAACTTTTTGTAATTTATATAAAAAGGAATTTT GTTCATCTAGTCTTGTACAGCTAATTGTATTAACATGAAGTTGAAGTACT GTGAAGCAAATTGTGTAATTTTTTTCTGAAAATTGTAAAGTACACTTACA AATATCAATACAGCAATATGTCAGATCTAACCAAATTAATAATCAGCACT GTCACCTAATACGTAATAGTTATCTGAAAGTTGTGAGTACAATATGATAA ATATTTTACAAGTTCGGAGATTTTTCCATACTACTGTACATATGGAAAAT CCAGAACGAGTGAAGTATTTCCATATTGTACTCCTAGCAAATGTCTGATA ACTGTTTGTCGGTGACCCAAAAAATGCACTTTTTGTGTTGGAAAAAAGCG CAGGGCAGTTTTGTAGCAAAGTGACGTTAGGTTGCTGCTACTGCTACAAT GCAACAACATCTTTTTGTCAATTTATATTTTGTAAAATACGAGATATATT GTACTCTTTTTAACCAATCAGATTGCAGATATTTTTTGGATTGACGATAA AGTTTCCTTTGTCTGAAATATTGACAAAAAAGTTGATGCAATCAGCTTCG AAATTTGACGTTTCGTTTAATTTAACCACTTCTTCAAATAATACCTTAAT CCCATTATTTTTTGCTTCATCTAATTGCTTTTGTTCATTTTGTTTAATTT CATCACATTTCCTTTTTGTAATTCAGCTGCAAAAGCTGATTGAAAAACTA ATTTAAAAACGTTTTCTGTTTTTAGGAAGGGAGAGAGCCAGAAGAAATGC ATCAAATTCAAAGAAAAAATTGGTGAGATTGATTACTTTTTTGTAAATGT AATAACAGGAAATCGCAAGAATTTAGTACTCTAAATGCTTGCCTGAATAT TTCTTGACTAAAGAAAAACATTTAAAAAGACATATTTCATAATTGTTTTA TTGACATCATAAATACATTGGTCAGTTTCTCAACTACTAACCTATGTAAA GCCTTAGAATGAGCTATATCCCTATTATTTGGAAGTATTCTAAATTTCAC AAAAAAATGGATGGGGAGCAAACAATCCAAAACCAATTTTGATTTAAATA TACAGCCCAAATATCTAGAAATCATCAACCAGACCTATCCAAATTATTTA CCTGCCGTTCCCAGTAACATTTCAGGTTCCAAATGAGGTGATATGGGCCC AAGCTAACTGAAAGATTTTGATGAAAACATGATCGTACCAAAAGAAGTGT TGAGAAAAAAAATACAATATATGATTTCTCCACATAACTTTAGAAAATCG AATTCTGAAAAAAGGGCATTCAAGACGTCATCAACATTACAAACCGTTAA CTTATTATAAGTGAATTTTCAAATTTTGGTTCTGACCTTTTTCTATATGT TCAATAATATCATAGCTTCAGCCAGGTTTCTAGCTCCCCCCCCCCCCCCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCC CCCCCCCCCCCAACAAAGTAAGGTCCCCCAACAATTTAGCTCCCCCCCAA AAAAATTGCCATGTGCAGGTCCCCTAACACTTCAGGTCCCAAGATAAACA AAAACAAAAACATTGTTCTCTCGTCCGCGTAGAGAGAAGTCAATAAAAAA TATATGCGAGTACAGTACTGATAAATGAAAACTAAATCTTACTTGTATTA ATATTTATGTTTACAAATCTTTTGCTTTTTATATTTGATTATCTAGGCTC CCCCTACAATCTAGATCCCCCCAAATATTTTGGTAATTTTAGCCCCCAGG CTCTTTAAAGGCCAAAATATTTCTTAAAATAAAGATAATACCCTTGCATT GAAGCTATAAAGTAACGTCAATATAGTTCAGTTATTTGAATGCAGAAAAT AATTTGCTTTTCGAGTAAAGACACACGGAAAGCTTTTTTAAAACATTCAT CAACCTGTTCACCTGTTCGGTAAAATATACCCCTCATATATCATAAACAC AAATACGGGGTATATCTTGGTCAGGAATTCATACACTGTACCTATCCCCT ATATCAAAATCAATTTGAGGATGCACACAACACACCAACAAGGCCTCATC ACATATATTTAAGGAAAAGTAGATCTAGAGATCTCTGTGCACCTGGTTCC ACCTACATTAAGCAGTGGTACCATTAGGATACTTTTTTTGAAAAACTTTT TTTTTGAGAAACTGCCTCCAGGGTTTATAAAACTCATCTCATCAAAATAA CTTACAGTGTTCAAAGTTCTTCCGTCTCAGACGGATTTCCTTCTCAGCGA AGTTTAAAAAGAGGCATTTCCATCTCAAAATTCACTGAAATTCAATCACA TTTGAGTAATCTGGCCTATTTTGTTTTGTAATATCCCATTTTCCGTCTGA GATGAAAAGCTCTGCTTTGACCACTGAACTTAGGTTTAACTTGTGTTTGT ATTATATTAATTTGAAAGAATTTTCTTTATTTAACAACACTTGATGTATT TGACTTAGCATGGTCCTGGTGAGCGTCTATTTGATTATGAGTGTATTATT TTTAGAACATACCAGATTTGAAAGATCAAAATGCCATTCAACAATTTTTC CTTGCTTCTGTTGAAGAAGGAGAAAGATATTTGGCCATGCAAGATTACGA AAACTGTGTCAATAGCCTAACACAAGCCATCGCTGTATGTGGTCAACCTC AGCAATTACTTCAAGTCTTCAGAACTACGCTACCTCCTCAAGTTTTCCAA ATGTTGTTAGCAAACCTTGCAGCATTAGGTGAAAATCAACCTGCTGGTGC AAGTGGTATGAATGTTGCAAGTGGAATGAGCGTTGGTGCTCCTATGGGTG TAAGTAGCTTTTATAACTACTTTAATTAGGCAGTCAAAGTATATAAAAGA AATGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062985TCONS_00062985Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062985-proteinTCONS_00062985-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:321689..330343 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TOMM20mitochondrial import receptor subunit TOM20 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
211.42 214.32 169.08 173.47 203.11 165.06 141.23 141.02 118.82 120.51 138.8 133.12 127.38 138.13 112.54 124.61 147.13 163.58 54.31 62.52 140.43 144.03 171.24 156.76 279.17 224.12 103.78 114.16 105.63 105.11