XLOC_039448 (gene) - C. hemisphaerica

Overview
NameXLOC_039448
Unique NameXLOC_039448
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_375:404169..407638-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039448 ID=XLOC_039448|Name=XLOC_039448|organism=Clytia hemisphaerica|type=gene|length=3470bp|location=Sequence derived from alignment at scaffold_375:404169..407638- (Clytia hemisphaerica)
TAGGAAGGGAGAGAGCCAGAAGAAATGCATCAAATTCAAAGAAAAAATTG
GTGAGATTGATTACTTTTTTGTAAATATGTAATACAGTAATAGGAAATCG
CAAGAATTTAGTACTCTAAATGCTTGCCTGGATTTCTTGACTAACGAAAA
ACATTTAAAAAAGAAATTATTTCATAATTGTTTTATTGACATAAATAAAT
ACATTGGTCAGTTTCTCTACTACTAACCTATATAAAGCCTTAGAATGAGC
TATATCCCTATTATTTGAAAGTATTCTGTATTTCACAAAAAAATGGATGG
GGAGCAAACAATCCAAAACCAATTTTGATTTAAATATACAGCCCAAATAT
CTAGAAATCAACATTTCAGGTTCCAAATGAGGTGATAAATGCCCAAGCTA
ACTGAAAGATTTTGATGAAAACATGATCATACCAAAAGCAGGGTCAAGAA
AAAAATATAATATATTTATGATTTCTCCACATAAATTGAGAAAATCGAAT
TCTGTAAAATTTAAAAAAGGCAATCAAGACGTCATCAACATTACAAACCG
TTTTAACTTTTTATAAGTGAATTTTCAAATATTGGTTCTGACCTTTTTCT
ATATGTTCAATAATATCATAGCTTCAGCCAGGTTTCTAGCTCCACCCAAC
AAAGTAAGGTCCCCCAACAATTTAGCTCCCCCCAAAAAATTGCCTTGTGC
TAGGTCCCCTAACACTTCAGGTCCCAAGATAAACTAAAACAAAAACATTT
TTCTCTCGTCCCCGTACAGAGAAGTCCTGATAAATGAAAACTAAATTTTA
CTTGTATTAATATTTTGTGTACAAATCTTTAGCTTTTTGTATTTGATTTA
AAATAGTAAGATAAGAGATCTTTTGAAATTAGCTGAACAGCCCCCAGAGT
CTCAGTCAGATCATCTAGGCTCCCCCCAACAATCTAGATCCCCCCAAATA
TTTTGGTAATTTTAGCCCCCAGGCTCTTTAAAGGCCAAAATATTTCTTAG
CTCCCTCCCCCCCCCCATAAAAAAAGTAAGGGGGGGCTGAAGCTATGAAT
ATGTTCACATTTTATTTTATAAAATTTTTCACTTTGCTTGTAACGTCATC
AAAAACAACAATGTTCCCGGGCGCCCTCGGTAAATAATTTCAAAGTGTTT
GATTGATGATTTTGTTTATCACAATGGTCACATTTTTCAAAACAACCAAC
AGAAGTTAGTTCACAAACTAGGTAACTAAAGCACTTTTTATGTGATCCTA
CATAGCTCTCCGGCTCTAATGCTTTTGAGGAGAAAATTTCTCTTGACAAC
CAGTGACAATGGTATCTAAAACACAAATGTGCTCTTGTGAAAAATGTAAG
ATAATACCCTTGCAATGAAGCTGTAAAGTAACGTCAATATAGTTCAGTTA
TTTGAGTGCTGAAAATAATTTACTTTTCGTGTAAAGACACACGGAAAGCT
TTTTTAAAACATTCATCAACCTGTTCACCTGTTCGGTAAAATATACCCCT
CATATATCATAAACACAAATACGGGGTATATCTTGGTCAGGAATTCATAC
AATATTCCTATCACGTATGTCAAAATCAATTTGAGGATGCACACAACACA
CCAACAAGGCCTCATCACAAATATTTAAGGAAAAGTAGATCTAGAGATCT
CTGTGCACCTGGTTACACCTACATTAAGCAGTGGTACCATTAGGATACTT
GTTTTAAAAAACTTTGAAATGTTCTTTATTTAACATCACTTGATGTATTT
GACTTAACATGGTCCTGGTGAGCGTCTATTTGATTTTGAGTGTATTATTT
TTAGAACATACCAGATTTGAAAGATCAAAATGCCATTCAACAATTTTTCC
TTGCTTCTGTTGAAGAAGGAGAAAGATATTTGGCCATGCAAGATTACGAA
AACTGTGTCAATAGCCTAACACAAGCCATCGCTGTATGTGGTCAACCTCA
GCAATTANATTTGGCCATGCAAGATTACGAAAACTGTGTCAATAGCCTAA
CACAAGCCATCGCTGTATGTGGTCAACCTCAGCAATTACTTCAAGTCTTC
AGAACTACGCTACCTCCTCAAGTTTTCCAAATGTTGTTAGCAAACCTTGC
AGCATTAGGTGAAAATCAACCTGCTGGTGCAAGTGGTATGAATGTTGCAA
GTGGAATGAGCGTTGGTGCTCCTATGGGTGTAAGTAGCTTTTATAACTAC
TTTAATAAGGCAGTCAAAGTATATAAAAGAAATGGGACTAAGTTTTTTGT
TTGAGACTTCAGGAGACTTAGTTAATAATAAAGTTTGCTTTCTTAGCTTT
TTAAAGAGGTGTCTCCAAAAGCTTTGGTTTTTGACTCTAATACCAGACAA
ATTTTCTGTTTAGGCTCATTTTGGCTACCAGTGTTTTTTGAATGAAACAG
TGTTTTAAGATGTCAATTAAATGGATAGCTAAGCTAACTTTACTTGTTTT
AGCTCGTTTGTTTGTTTGTGGTATCATATAATCCTTCCCTTAATCAGATA
CACTGGGAATTTTGTATACATTTTTTAAGTCAGCAACATTAGAGGCGATA
ACATTCACACCTCCAAAGCAAACATAACACCCCTGTGGAGTGTAACCAAT
CACAAGCCATTAAGTTTAGAACCCATACTAAAAATTTTACACATCGCTCC
TCATCACTGTCCTTGCATCCAAATTTGAATGGGGTACTCTAGGTTCCAAA
TAAACAGGGGGAGTTCGAATAAACGGGGGGGGGTTGGAAAATTTTCTAGA
TTTTGATAAACGGGGGGACCTAATTGCCGGGGGGGTTGGAAATTGTACCT
CTGAANGGGGGTCCTAATAAGGTCCGGGGGGTTGGAAAATTTTCGAAAAA
TTAACAAGCGGGGGGCCGTTTATTTGGAACCTAAGAGTAGGGGTTTGGTT
GACACATGTTTTCAGTTTTCAATTGATAAACCCTGCATTTCTTTCCAGGT
ACCAGAAGTAAAAACAACAGATGAAACTGACGTCCTCGATTAAAAGAAAG
ACAAAAAAATGTACAACTCATCGCNGGGGGGTCCTAATAAGGTCCGGGGG
GTTGGAAAATTTTCGAAAAATTAACAAGCGGGGGGCCGTTTATTTGGAAC
CTAAGAGTAGGGGTTTGATTGACACATGTTTTCAGTTTTCAATTGATAAA
TCCTGCATTTCTTTCCAGGTACCAGAAGTAAAAACAACAGATGAAACTGA
CGTCCTCGATTAAAAGAAAGACAAAAAAATGTACAACTCATCGTAAAAAA
AAATTGAAAAATCAAAATATGACAAAGACAGATTCTAAAACAGCAAACAA
GACAACATACTTAGTTTTTATAGATTTATTTGTATATAGATGCTCTTACT
TTTTCTATTTTGATGTACAGAAAGATGGCCAACACGCGCTTTAGAGTAAT
CCATAATTATAATACAATTTTGAATTTTTTTTTAAATCGACTCTTCAAAA
ATATAACCTTGCCCCTTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062988TCONS_00062988Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062988-proteinTCONS_00062988-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:404169..407638 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
384.57	400.37	326.86	322.8	332.52	229.45	206.22	216.92	182.61	190.53	203.17	195.62	181.16	194.03	194.3	208.97	221.8	266.93	119.84	111.14	247.22	254.27	327.31	283.41	313.23	257.86	162.72	158.44	185.11	177.58