XLOC_039519 (gene) - C. hemisphaerica

Overview
NameXLOC_039519
Unique NameXLOC_039519
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_38:309063..312896+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039519 ID=XLOC_039519|Name=XLOC_039519|organism=Clytia hemisphaerica|type=gene|length=3834bp|location=Sequence derived from alignment at scaffold_38:309063..312896+ (Clytia hemisphaerica)
aaaaaaaatcagtacACAAAATAAGaatgcaatgaaaaaaacaGTATGCA
GAATGAAAAGTGATTCAAATTATGAGTAAACAGTAAAAAAAGGTTTAGAC
ATGGAAAATCAGTACACAGCTACCATACTACTTCGACTAAACGCAAGCTG
GGGCGTtcgttaaatttggattttaggaggggACGTTCATTCGAGGGGGA
GTTTATCAAATTATCTTTAGCCAGGGGCACTTtaataaagtaaattttag
ccatattttgtcttttcgttttctttcNGCCAGGGGCACTTtaataaagt
aaattttagccatattttgtcttttcgttttctttcaattcaaatatttc
attttagcTATATGCTAAAATGGGTCAAACTAATTCAAGTCTCTTAGCCT
ACCCCAAAGTTATTAGCcttgttttggcgaaaaactcgtccccaggcccc
actcgggtaagttatggcctGTCCATTCTTTTTGCGTTCGCACACGCGGG
ATTTGTCTTTGAAAAACGCGTTTACTAAGTTCCTTATTCTGATTGGTGGA
TTTTTTGATGACGATGCGTTTTTCATTATGAGATATATCTGTCCTGCCGT
AAACCGACAAATTCGGGAAATCGAACAAGAAGCTTCCTGCAGTTTTCTAT
TTGACTAAAATGGGAGCCGCCATTTTATTTCTTCGAGCTGTTTCAAGAAT
ATCTCAAGAGCAATGTCCTCAAACATCACTTCAACCATCAAGTTTTACAT
CAAATCTAAGGGGTATCAGGTAGGGAGTCATTATTTATGATTTAGAACTT
TAAATTAAAATAAATTTGATACTTTTAGCTGTAAAACGACTAATCAAAGT
TTGGTGCTCGATGTTGTTGTGTTGTAGCCTCAGTTAGATTTCTCTTGGAG
CTTATTCAAATATTTTTTCTTTTCCATCAGACGAAATATAAACCTAGGGT
GGATTGTCCATGTTGTACAATATAGTCACTTTCTTTCTTTTTTTTTGGGA
AACAACACCCAACAAGTGCACAAACAGTTCACCAGTTTATGTGCTTTCAG
AAAAGATGAAATGACTGAAACTATTTTTATACTAGACTGGTTTGGTAAAA
AGATTCCCTTATCATTTCCCTTATTTATCCCTCACTTTTCTCAAAAAAAT
GTATCATCATAGAATAGAGATATTTGCCTATGTTTACAATTTGAAAATAA
GCTTTCATAGTAGACAATTTGATTCCTTGTATATCCACAATAATTAATTA
TTAACAAGTACCGTGAGATCGGGTAACTTGCATCAGTGGAGTAACCTGGC
TGGTCATTAAAATATATTAGAGCTACGAGCAGAGCTGCGTAGTTCATTTG
TTTTGAAATTTTGCCACTTTGATTGGTCAGTCATTTGATGGCCATGCAAG
TTTCCCTCCACTGATGCAAGTTACCCGACTTCAGGGTATATACATTCTCA
GGCGATGTCAACCAACCAATTAATTGGAAGTGAGGCAAAATAATTTGTTT
TTGTTTTTTGAAAATGAAACACTATATTGAAGACAATAGGTATAATCCAA
GGTTTATGTAATCAAATTGATCAAGTAAAAATGTAGTACCTTCTATTAGA
TTCTATAATTGAATTTTAATCTTGCGATTGACTTCAATTAATTTGACAAT
AGAATTATTTGGTTGACATCGCCTTTTGACATCAATTACAATCAATAATA
GATATAGATATAATAATTAAGGTCCAAAACATTGTGACCTAGTCTAAAAC
ACAGTGACTATCGGTTATCAATCGATATAGATCGATTTAATGTAATCAAT
TAATAAACGATATCAGACGATATATAATCAATCATATTGATAGGTATATA
CAATCGCTAATATCGATTTGATCGACAAGTTTGATAAACTTAGAAAAATT
AACTATAGATGAAATGATAAAATAATTAATGTCCAATTGTATTGGGTTGT
AATTGTGTATTGGTTGTTATTTTCAGTTTCGACAAATTTTAATTTTTTTT
GTGTTTCTTTGAGGCTTTTTTCACTGATGGCTGCCCCTGGTACAAGCTAG
GAAGAGATGACCGACTGATTCTATAATTGAAGTTGAGTTGCCTTTCTTCA
AACGGTAATTGGTAGGTAATATTTCTTGTACTTGCACCACTTTTTTAAAA
GCATAAATAAAAAGTAGAAAAATATTATAAATTTAAATCATACTTTTTCT
GACTTGAACAAGCCTTTTTATAGCAAGACAGTTAAGTCAAAAACCCCTAT
CCAAACCTTACCTCAATTAATTTTTTTGTAGAAATTAGAAATGAGATCAT
TAGGTTTCTTTGTTGATATTTTTTTAGGGATGCTAAATGAATGTTGAACT
ACAAAACAAGATTTAATCGATTCAAACTGGGAAAAAGAAAATCATCTTAC
AAAAAGGTGTAAGTGTTTATAATTTGATATTATCTTGTAACATATGCATA
GTATGTTGGCTTTACCCCCTTCACATACGTAAGCTTTTGAAATTACCCCC
ATCCGGGGGGGGGGGACAAGGGTTGGCGAATGAGGGGTATGTGCGGACGG
GACCTCCGAAAACCGACCCTTAGAGAGACTGATTTTTGCTGAAAAGGTGA
CCCTTAGAGAGACTTTTTGAATTTTTTTTCGATTTTTGAAAAAAGTCATA
CCCTTAGAGAGACTTTATTACAATTTCTTCTCTGGAAATCAAAAAATGTC
CTAAAAATCTTGAATATTCCGGCCCTTTGAGAGACTAATTTAAAACTTTC
TGATTTTTCAAACCCTTAGAGAGACTTTGAAAGGTGAAAAAACCGACCCT
TACCGTCCGCACATACCCATCATCCATTTTTGCCTAAGTAACCCCCCCCC
AGGCCCCTACTAGTATCCCCCAGATTGAAGGGTTTATACATGAGCAATTG
TTTAAATTAAGGGATTCTTGGAAAAAGTATATTCAACTTCCTTTTGTGTT
TGTTGATGAAAATACAGAACATCCAGCCAAACTTTCGCTGAAATTTGGTT
CTATTGAAAAATGTTGATTTGTACTCTCAAGACTCTAATAGACAGGTGGT
CTGGAATTTGTTAATAAAACTAATGGCCAAGGGGTGTTAAAAGAATGTCT
CGAGTGGAAAATTATACAAAGGCTGCTTATGACCGCACCCTCCCCCTCAG
AGCATATGTACTTTATACGAATGGTCCTAAAAAATGTCCATGGGTTCTGT
TTTCAAATGAATTTAGCCATGTCACAAGTGTTCTAGTGGAATATTAAACA
CTCAGTATGCTCTAATTTCAAATTTTATTTTCAGGTAAGGAAAGGAGATC
CCATTGGAAAGGAATTGACAtgaattcttatttttctgatCAGGAATGGA
TTGTAAACAATCTAATAGGAAATTTGCCCAATTTATGACCCATTCCCCAT
TTTTAGGCAATATTAGTGTGGTATGTGAGTGGTAAGCAGTCAGATTGAGA
ATCTGAATTTTTTAAGATTAGGGGGGTGCCAAGATGGGAAGATCCGACCC
ATCCACACTATGAAATTATGTATGTTATGTAaattttatttctctttttc
attctttagaCCTTAAGGACCGGACTGATTGGATTGGATCGGACAGATTG
CTCATCGTCTTGTGACTTTTCGACGTCTTGTAGCGATCAAATTCGTCAAC
CTTATAACATCAATCCCAATTACTATTGGcatttggattttgaattttga
atttttgtgaagcaccatattttattttaatgtatCAACATCGAACAAAT
TTAtatgaaataataattttcaaaagcattattgaaaaatttgaaactcT
TTCTCAGTTCCTTTTTGCATTATGATAACTGCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063098TCONS_00063098Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:309063..312896 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56	0.65	0.73	1.32	3.35	2.59	3.74	3.95	2.87	2.99	2.1	2.43	1.88	1.9	1.77	2.12	2.87	2.58	3.24	2.18	3.66	4.1	1.68	2.12	0.82	0.79	4.97	4.79	4.3	4.44