XLOC_039520 (gene) - C. hemisphaerica

Overview


Name	XLOC_039520
Unique Name	XLOC_039520
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_38:289..8651-

gene from alignment at scaffold_38:289..8651-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_039520 ID=XLOC_039520|Name=XLOC_039520|organism=Clytia hemisphaerica|type=gene|length=8363bp|location=Sequence derived from alignment at scaffold_38:289..8651- (Clytia hemisphaerica)
CGGGAATGCAAAGACCTTTTGAACGCATACCGATGTACATTGATGCAGAA
CCATGACGCGTGTACCAAAAGACGTTTCCTTGTCAGAATCTTCTGTAGAA
AGCACTGTGGAGTTTGTGGTAAATATGTTCGCTTTATTTTGTAAGCATGC
GGAAATTCAGTAGAAAATATCCAAAATATTCTTATAACCCTATGCCTGAA
ACTTGAACAATATAATTCCCTTGATTTATACCTCAAGTGAGGAAAACCAT
TGAAAATGGTAATTTCAAAGGAACACTGATTCTTTTCCGTCTGCCTGGTC
ATCAAAATAATTTATGCAGTCCTGCAGCCAAACAATTAACGTGTGGCAAA
AATTTGTTTTGGAACTACTAACAGAGAACTTAAAACAGGGCGTCTTAATT
ACATGTGAGCTCCAGTTCAGAAAAGCCCCGTCTGTGCATAGCACTACTTC
GTCACATATCCTTACTTCGTCTCCTATTGTTATTTTCTCTTTTACGTCAT
AATATATGCATGAATAATCGCATAAATTATTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTGAATAATCGCATAAATTATTTCTGATTGATCTT
GAGATTAGAGGTGGTTTCTACTTGCTTTTTTTTATTGTATTGTTCTGTAA
CACCTTTATAGCTGTTGAAATTGAACAAAAAAAATTGTTCTTTCATTCTT
TCATGTGAAGGTGTTAATAAACAAATGATACAAGAAATAGTCTATGGTTG
ATCTCTCTTTTTTTTAAAGGTGTTAACAAGCAAACTAATAAAGTGAATGG
ATGATCGCTTTCTTGTTCCGTCTAGCAAAAAGTAATACAAAAGGTTACAA
AAGGTTGAAATCTCAATGTCTGAACCCTTTTTTTATCAAAAACTTTGTAA
AGAACATACTGTATACGGTTTCTAAGAAGCGGCACTAAAAAAACTAATAA
AATAGGAATCGAATTTGAAATTATTTTTCAAATAATTTTAGATAAATTAG
TTTTCACATTGATCTATCTGTGGAAGTTTTAAAAATCGAAATTTTTTCAG
CTTGTTTCTTTCGTATCTCTAAAAGTAATGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAG
TTTTTTGATACATACATCAACCAGGTCACAAGTTCTGGGACACTTTCGTT
TTCGACAGATCACTCTATCCTATCCTGATCACGGCTGGGATCCCTTAAAT
TCGGTCTTACCGGTTAAAGATCGCCGTAAAAATTTTAATAATATTTTTAG
GGTTAAGATTCAAAAGAAAGAACACCCTAAAGCTTTAAAAAAATTGAATG
TTTTTAAAAAATCTCAATAGAAACAGGTATATCTTATTCTGTCTTGTCGG
GCGTTTCGGCCGCAAAAGTGCAAGGTAGCAACTCCTCTGCACCTGAACTT
TCAATATATCGTAAAATTCTTTAAATATCGAAGAAATTTTTGGACNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACCAAGTAGTGTT
TGGTGTTTTTGGTCCAAACTATGAACATTTCTAATGAGAAAAAAGGCGTA
ACGAAGTAGTATTAGGTGTTTGAGGTCCAAATTAAGAAAAATTCTTTCGA
GTAAAGCAGCGTGACCAAGTAGTGTTTAGTGTTTATGATCCAAATATCCA
AATTAGGAATATTTTTAATGAGTAAAAAGTAGCGACCAAATTATGAACTT
TTCTTATGAAGAAAAAAATGTGACCAAGTAGTGTTTGGTGTTTTTGTGTG
AAAGTATGATCATTTCTAATGGGTAAAAAGGCGTGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAT
GTGATCAATTAGTGTTTGGAATTTTTGGTCCAAATTAGGAATATTTCTTA
TGAGTAAAATGGCGTGACCAAGTACTGTTTTGGTGTTTGGATGCAAGTAT
GATTAATTTCTAAGGGGTAAAAAGACGTGACCAAGTAGTGTTTGGTGTTT
TTGTTCCAAGTTATTAACATTTCTAGTGAATGGAAAAACGTGACCAAGTA
GTGTTTGGTGTTTTTGTTCCAAGTTATTAACATTTCTAGTGAATGGAAAA
ACGTGACCAAGTAGTGTTTGGTCTTTTGGTGAAAACTATAAGCATTTTTA
AGGATAAAAAAAATGTGATCAATTAGTGTTTGGAGTTTTCGGTCCAAATT
AGGAATATTTCTTATGATTAAAATGGCGTGACCAAGTAGTGTTTTGGTGT
TTGGATGCAAGTATGATCATTTCTAATGAGTAAAAAGGCGTGACCGAGTA
GTGTTTGTTAGTTAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAACTCCGTTGTAAAATTATTTTGA
TAATTATTCTGGTTTGACATTAATTAAAAGCAAAATGTTGATGTGTGGTC
AAAAAAATGTATCCTTACTTGGTCATGACGATGCATTGCGTAAGAGTTCT
TTAAAAATTTCGCAAAAATTTATATTCCCACTAAATGGTCACGTGATTTA
AAAGTTAGATTTTGCAGATCAGTCAAAAAGATTTATCCTTACTTGGTCAC
ATGACTTGAAAGTTAGATTTTGCAGATCAGTCAAAAACAATTTATCCTTA
CTTGGTCACATGACTTGAAAATTAGATTTCGCAGATCAGGCAAAAAAATT
TATCCTTAATTGGTCACNAAATATCCTTACTTGGTCACATGACTTGAAAG
TAAGATTTCGCAGATCAGGCAAAAAAATTTATCCTTACTTGGTCACACGA
CTTGAAAGTTAGATTTTGCAGATCAGTCAAAAAGATTTATCCTTACTTGG
TCACATGACTTGAAGTTAGATTTTGCAGATCAGTCAAAAAAAAATTATCC
TTACTTGGTCACATGACTTGAAAGTTAGATTTTGCAGATCAGTCAAAAAC
AATTTATCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATTGGTCACATGACTTGAAAGTTAGATTTTTCAGATCAGTCAAAAAAA
ATTTATCCTTACTTGGTCACATGACTTGAAAGTTAGATTTTGCAGATCAG
TCAAATAAATTTATCCTTACTTGGTCACATGACTTGAAAGTTAGATTTTG
CAGATCAGTCAAAAATAATTTATCTTCACTTGGTCACATGACTTGAAAGT
TAGATTTCGCAAATCAGGCAAAAAAATTTATCCTTACTTGGTCACATGAC
TTGAAAGTTAGATTTTGCAGATCAGTCAAAAAGATTTATCCTTACTTGGT
CACATGACTTGAAAGTTAGATTTTGCAGATCAGTCAAAAAGATTTATCCT
TACTTGGTCACATGACTTGAAGTTAGATTTTGCAGATCAGTCAAAAAAAT
TTATCCTTACTTGGCCACATGACTTGAAAGTTAGATTTTGCAGGTCAGTC
AAAAACAATTTATCCTTACTTGGTCACATGACTTGAAAATTAGATTTCGC
AGATCAGGCAAAAAAATTTATCCTTAATTGGTCACATGACTTGAAAGTTA
GATTTCGCAGATCTGGCAAAAAAATTTATCCTTACTTGGCCACATGACTT
GAAAGTTAGATTTCGCAGATCTGGCAAAAAAATTTATCCTTACTTGGCCA
CATGACTTGAAAGTTAGATTTCGCAGATCTGGCAAAAAAATTTATCCTTA
CTTGGCCACATGACTTGAAAGTTAGATTTCGCAGATCTGGCAAAAAAATT
TATCCTTACTTGGCCACATGACTTGAAAGTTAGATTTCGCAGATCTGGCA
AAAAAATTTATCCTTACTTGGCCACATGACTTGAAAGTTAGATTTCGCAG
ATCTGGCAAAAAAATTTATCCTTACTTGGCCACATGACTTGAAAGTTAGA
TTTCGCAGATCTGGCAAAAAAATTTATCCTTACTTGGCCACATGACTTGA
AAGTTAGATTTCGCAGATCTGGCAAAAAAATTTATCCTTACTTGGCCACA
TGACTTGAAAGTTAGATTTCGCAGATCTGGCAAAAAAATTTATCCTTACT
TGGCCACATGACTTGAAAGTTAGATTTTGCAGATCAGTCAAAAAGATAAT
CCTTACTTTTTCACATGACTTGAAAGTTAGATTTTGCAGATCAGGCAAAA
AAATTTATCCTTACTTGGTCACATGGTCAAAATATGTTTTTCATTTACCT
CTTCGCCTATCATTTTCACACCTAACGACGTAATTGCTTTATGTATTCTA
GAAAAATATATCTGTCAATCAATTTGCCATATTTTATTCAAAGATATCTG
TCAATCAACTTATTAGCTTGCATAATAGCATATGTTACGTCATNAAATAT
CCAAAATATTCTTATAACCCTATGCCTGAAACTTGAACAATATAATTCCC
CTGATTTATACCTCAAGTGAGGAAAACCATTGAAAATGGTAATTTCAAAG
GAACACTGATTCTTTTCCGTCTGCCTGGTCATCAAAATAATTTATGCAGT
CCTGCAGCCAAACAATTAACGTGTTGCAAAAATTTGTTTTGGAACTACTA
AAAACAGAGAACTTAAAACAGGGCGTCTATTAATTACATGTGAGCTCAGT
TCAGAAAAGCCCCGTCCAATACACCTTTCCCGTAATTCGTAAAACTAATG
CGCGTGCATTATTTTGATGCTCTCCACCGTTTGGGCTCTGGAGGTAATCA
AACCCGTTTTTGCCTACGTTTCCTCAGGGATAGTTGGTTTTTTGAGCTTT
TCTTAAGTTCTGTCGAACAAAATCCCCTCAAATTTCATGATATTATACCA
CCCTTAAAATCTTTTGCCAAAAGAAGATCGCTATCAAAAGTTAGAAACTG
AAAACCCACTTTCCCTAACCCCTCGCTGGCAAAAACGCATTCGTTTACCT
CCCAAACAATTTTATACACAACGGTGGAGCGCACATTTTCCCGGGCCATT
TCTGAGAAGTTTGAATTACGGGAAAGGTGTGTTAGCTTAAAATAAACGCG
TTGACCCGTTGACATAGGCATCTTTGGTGAGAAACATGTTGGCCCCTATC
GGGTAAATAAGAAATATTGACGACGCTGTATCCTGAATTCTTTACTGTTC
AGGTGATGTTAAATGCCGCTCAACACGGTACGGATGTTGCCACGATGGGA
AGACACCTGCTAAAGGACCTTACTTTCAAGGCTGTAAAGGTAAGAAACTT
TTCTATTCTCCTCAATGCTATTCTCAATGAGGAAGACATTTCCGTCATTG
GTCCTTAAGAGTTAGAATATTGCTACTCAAAGCCATCTTCAAATACCTAA
TTTTATAGCTAAAGACTATCGCTCCATTGGTATTCGAATGAAAATTTACA
ATAATACCGCTGAGGGCTAGAGCTCGATCAGAGCACTAGATGCAGGAGAA
AGCTAAAAGTATTAAAAGAAGCATCGAGCTCCTTCCCAAGTCCATTCACT
TTACCCTTAGATTATATTTAGACTAACTATTCAATTCCTTATTTTTCAGA
GCCATGTCAGGATGAAAGAAGCTCATATTTTTGTCAATCCATAGTGAGAG
CAGGCTTCTGTGGGAAACCTCGATTCAAACAGTTTTCAAATCTGTGTCTC
AACTCTTGCAGGATGTGTCGTAAGAAATTCCCATTTTTCCTAATGTTCGG
ATGTGCTTTTTTTATCCCTCACCAACCTCGGTTTTTTTCCAAATAAAATC
ATTCTCCTGAAAACTTATTTGCGTCTTTTTTCACCTGGTCCTGAGTTTCC
ATTACATGTTATCTCACTCGAATTCATTACTAATCTTGTTAGAACAAACC
AATTGTCAGGTAGAACGGACTAGACGATGGTAAGGACGGACCAATATTTC
CAGGGTAATCCGAGAAGAATTTCCGAGAGTGTAAAAAAGTGTTTTATCTT
TCCAGTGGGTAAAAAGATTTTCTAAAATTTCCATGGGTATCTACAAATTT
CCTAGAAATATTTATTTTTGACTTGAAAGGGTTTGTCCATCCCCCCTTCC
CACAATGTATAGATTTTTAGCGGAAAAGCCTGATCCTAGACCTAGGACAG
TGGAGAGTCGTTGGACGATTGCCCAGTCTCAAAATTGCAACTTTGGGGAC
TGTGAGGGGAAGGGCATTTCCCTTTTCAAAGCCATTTCCAGTGATTCTCA
ACCATTTACATCCAGGATAATAGTTTGTATATTCTTCATTTACAGGACCA
TGCGAAGATTCAGCCTCCACAGAATGTCCGTTCTTTGCACGTCGTGGACG
TTGTGATACAGACAAATCAAAAACGTATAATCGATGTCGCAAATCTTGTC
ATGTTTGTGGTAAAGTCAATGTTACGATTCATTATAATACCCCAGCTGGC
ACATAACGTTGTTTCAACGTTTATCTAACGTTCACAACGTCCATATAACG
TTATATGAACGTTGAAACAACATTGTGTGCCAGCTGGGACACAGTTTCTT
ACTTACTTAGAGATAAGATTTACACATATCCACTTTTCTGATTTTTATAA
CTTATTGACTAAAATATATCCAGAAATGTGGTTGAAACTACCTTATTACA
CGAATATTACTAGTCATTTTACTAACACAAATTGAAAAGGTTCGTGTTAA
TAAAAAGCCTCTTACTGTTATTAATATCAGCCGTGGTGTCCTTGAAAAAG
CAAATAAAATTTTCAACTCTATTTAACTCTAGGAGTCAAAGACCCCTGTC
AAGGCTTCATTTGCACGAAACCTAACACAAGATGTCGAGTTGATCATTTA
GGAGTACCGTATTGCGGGTGTCGAGTACATTGTGATCCGGGCGATCATTT
TACCGGAACAGTTTGTGGAAGGGATGGCAAGGAATATAAAAACAAATGCC
GATTGCTTCATTCGAACTGTGAAATACCAAATATTGCTAAGATTCAGAAC
TATGGAAAATGTCCTAGCTTAAATATAAAAGGTAAAACGTTTCATATTTT
TCCTATAAATGAGATCCCAAAAAGTATCACAAACTGAAAAATTTAAAATG
TCATTTTTCCGTG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00063099	TCONS_00063099	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00063099-protein	TCONS_00063099-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_38	supercontig	scaffold_38:289..8651 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.09	0.13	0	0	0	0	0	0	0	0	0	0.08	0	0	0	0	0	0	1.31	1.12	0.34	0.18	0	0	0	0

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XLOC_039520 (gene) - C. hemisphaerica