XLOC_039544 (gene) - C. hemisphaerica

Overview
NameXLOC_039544
Unique NameXLOC_039544
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_380:64723..66920-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039544 ID=XLOC_039544|Name=XLOC_039544|organism=Clytia hemisphaerica|type=gene|length=2198bp|location=Sequence derived from alignment at scaffold_380:64723..66920- (Clytia hemisphaerica)
GATATTTTGTCTTTTTTGTGTTTGCCGATTATTTTCTTTGTGTGAACATG
GTCAAAAAGATTGTTATGATGTATCATATGTAAAGCATATTCAGCTATTT
CTTTCAGAGGTCTAAAACTCTTATTATTTCAAAAGTTTCTCGCTTAGCAT
TTGAGTAACAGTAGAAATATCATCAAATATTTAAAAAAAATGGGTCAGAA
AAGGCTGAAGAAAGGAAAAAGTTATGACAAATTTTAGTGAACTTTATACG
AGAACTCGATACCAAGAAGACAATTTTATAGTTGAAAATATATACTAATA
TAGCAACAGCAAAATTATTATGGGAACAAGGGTTGAGTTTTGAACAACTA
TTGTATAGCATGAAGGACTTTTTTGCAAATATTTTTCAATTCGAATTAAC
AACGCAATGTAATTGGCTTCCAGCGAATCAGTTTTTATTCCAGCTGGCAA
ACATTTCCCTTGTATTGACTTATTTTGTTAAACCAAGTGGTCTTTATGAA
TTGATCCAGCTTCGCGTCTCTCTTACATGCGCTGGACTCTGTTTCGGACT
ATGGGGAGGAACTGTGATCTGCTCATTAGACTGTATGGTATGGAATCTAG
CCTTTACTGTTGGAAACGCATGTCATTTAGTGTACATTCTAGCCAAAATG
TGGCCATCTCCTTTCAAAAATAGTCACCACGAATTAATTTTTGTTAACGT
TTTTGGACCTGTTGGTTTGAAAAGATATCAATTTAGGACATTGATGACTA
AGGCTAAAGAGATACAACTACAGACTGGGGAGTATTACGCAAGACAGGGT
TACACCGATTCGAAGCATATTTCAATATTAGCTGACGGATGGTAAGCGCT
GGCTACAGTAGAATATATTTATGTAATCTAGTAAGCTAGGTTGAATACTT
GATTGTAAAAAAAAAGTCCCAGCCTTTATACCAATTTACTCTGGATTTCT
GCGCTATGATAATGAATTCAGATAATATTAAAAAACCCACTGATCTTATG
TATGCACCAGGGGGATCGGTTTCTAGTTCACTTATTCTCTGTTTTCCGTG
AGCGTGTTAACTCAATAATTCCAGATAATTTGACGCCATTCAAAATTTGT
GAATCTGTATCGGCTTTACAAGACAAGGAGCTTTTTGGGTACAATGGTGA
TGTTTGTTTCCATATGAAGTGTTATAATTCGAAAACTACATAAAATTACA
ATGAAATTAATTTAGATTTATTTCAATTGCTCTGTTAACTTATCAATACT
AACTTCAACAGGGTTAAGAATTTAGTTTTCTATAGGTACCGATCTTGATT
CTTTCTTTTGATACAGTGTGGAAGTTTTGATTAATGGACAGTCGACCAAC
TATGTCGAACTATTCGAATTCTTAGATTCACCAGAATGGCTGACTCTGAC
GGATGATGATGCACCTTCAAAATATCAGGTTTCTACCTTTTGCTTATCTA
ATATTCTAATTTTATTTGCTTGTCACGCAAAATTCTTTGCTATTATTATC
ACGATCTAGAAAAATCGCTGAAATTCATCACCATGCAGTAAAAAGTAGCC
CAAATCACGCATCGCATCCTTTAAATTCTTACCCTTTTGCACAGCACTTT
GCGAAATCTTTATTTCTCCATCACGCAAAAAAAAATTTGGACTCATGCCA
CCACCACGCAAGGAAAAAGTCCTGATCACCAAATCACGCAAACCCTCCGG
GAGGGGGATGCTGGACTGATCCCTTAACTGGGTTAAGCCTACTATAAATG
AGGTTAATTCAACTTTTAAGCGAAGAAGTAAGTTGATAGCCACTAATTTT
TTGATTTGGTGAAAACGACGGAAACGTTTGTAGGGTAATCTAGTTTTCCC
CGGCTCTTTTCGTCGCGTAGACTGCGTAAACTGTCTAAAGTAAATCTATT
TCTTAGATCATCACTTTTCCATCAATAGGTTTCTTTAGTAGCTGCGGAAG
ATTCGGTTATCTATCAATTCCAAAGAAAAGACTTGTTTACAATCTTTCGT
AAAGATGAACTCCTAAAGAATATCTTTGATTCCATCATTGGTAAAGACAT
CTGCAAGAAATTGTATTCATTACATCAATCCTTCTTGATGAAAGATTGTA
TAACCATAGTATAAGAAAGCCGCGGCTGGAATATGTACCGCATTGTCTTT
TGAGTTAATTGCTGTTCCATCTCTGTCTCCGAGCTTTATAAGAACATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063127TCONS_00063127Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063127-proteinTCONS_00063127-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_380supercontigscaffold_380:64723..66920 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
BVESblood vessel epicardial substance Homo Sapiens
POPDC3PREDICTED: popeye domain-containing protein 3 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.07	0	0.04	0.05	0	0	0	0.18	0.15	0.25	0.27	0	0	0.1	0.09	1.91	4.1	0.04	0.08	6.28	6.71	0.49	0.73	1.88	1.31	0	0	0.04	0.04