XLOC_039638 (gene) - C. hemisphaerica

Overview
NameXLOC_039638
Unique NameXLOC_039638
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_385:175449..180746+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039638 ID=XLOC_039638|Name=XLOC_039638|organism=Clytia hemisphaerica|type=gene|length=5298bp|location=Sequence derived from alignment at scaffold_385:175449..180746+ (Clytia hemisphaerica)
AAGGATAGAGGCAATATAAAGGTTGCAATTGCAGATAGCGTCTTAGCAAC TATCAAAAAGCGTTTGACCACCGACGGCCTAGAAGGAAGCTTTTATCCTT CTGAAAGGCTTGAGGTCAACTAGCGCTGGAAGATGTTGTTCAAAATTCGG TGTTGAAGAATGGATGCAACCTCCatgaattttcactataatCATTGCTT ACTTGTGGTGGCAGTTTCCTTAATTTGTTTTTACAATGGAGTCCATCTAC AGAGCAGTAAGTGTCCATTTGCTCGTCCATATTTAAGATTCTTTGTTTGt tgccaaagctaggggacttGGGAGGCTACaacatttcaacttttattCAT TGAGTCCTGTCCACATTTCTTACTacttgtgatttgattggtgcGGCCTT CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNggggggggggggtactagggcaagatgggttacagggatgctc cgctggtcagggtacctttttaacctccacgagtccgaGGTaaggtcgca aaaacaccaaaacagaaaaatcagtccctcgtagggtgcctttttttgga aaatttagggagaaagtagaaaatttgagaaaattttggaatttcagttc cattcagggtcacttttttcgcaaatctcgagtcccacgtagggtctatt tttcgaacctcagcggagcacccccgtcggtcgacaagggtagtaccccc cggggCTTAATGCACACCGTAAAGAATTCCTGACCACTGAGTAATTAGCC ATTTATTCTACTGACTGAGGACGAaaaaaatcagcacttttacctcCTTT AATTTTGCGGGTTAGAACTGCGGGTTGTTCCAAATCATTTCAGTCACTCC AACGTCTTCAAAAGTGTAGATACCCAAACTCGCTACTGTGATAATCACGG TGGTACCATTATTAGTCTTTAGTCCCACTGTAACAACGCAGTTTCAATGT CTAAAGGCTAATCATTAAGCACTTTCCCCGATCTTTCCTTGTCGGTCAGT TTTACAGCTCTGGTGCAAGAGAGGAGGTTGGGATCGCTTCTGCCTCCCTA TAAAAAATCGACCAGGTATTTCATGTTACAATTTCCTGTAGGTTTTTTCT ACCCATAAAAGAACTAAGAAACGTTTTATTTCTTCTTCAGTAACCGATTA TGAAGAAAAAGGATGTATAGGTTTACCTGATGGTGTTTATCCTATAAGGA ATCTCAGTGAGTACATCGTATGTGAGAACAACATTGGAAATATCAGTTCG TGTCGTCCAAATGAGATTTACAGCACAAACCACAGTTCGTGCACACCATT GAAAAACATCACTGAAGGTAATTTTTTTCCCAGCgtgcaaattgaaaatt tgtaagaAAATTATTTCAGTTGAGAAAAACTGATATTATGCATGAAATTT TTCGACCCTTATCGGTATTTACGTCATCCCCAGTAACTTTAACATTGGGT CATTTGTAACAAGGCTGTTGATAAAGTATTGGTCAGTACTCTCTTTTTTG TCTCGAATATCACTTCGCTAATCTAAGTCGCTCGGTTTTAAAAAGACTTA TCGTCAATTGATTAGTAGATGGATAGTCTTGCATTTTCTTCTCTTAGAAA GCTTTTGTGACAACCGGCCAACAGGTGACTGGATGTACATATGGGATTGc cacaaattttttcattgttatttcaACTGGTACAACGTACAAATCTGTGA AAATAACACTGTTTACAATGCTTTGCACGATGTCTGTACATCTGAATCTG AAAACACATGCATGGCTTACAATCTTACCAAAAGCTCTGGTAATCATGGA ACAGAATCTCCATCTACAACAATGATGCCAATCACCACTATCAGCCCTGG TGGTTCAAATACTACAAATTCTACCAACACGACTTCAACTCCATCGACAT TTATCACCACACCTTCACCAATAACAACTCAACTGCCACCAACAACATCT TATCCAACTTTTAGCCCTGGTGAATCGAATACTACAAATTCTACAAACAC CACATTAGCTCCATCTACGCTCACCACAACAGCTTTACCCATAACAACTT CACTTCCACTTACAACACCTTATCCAACTGAAAATAGCACTTCCTCTTCA AATGCTACCACAGACACTAAGGATCTGATATTCCCAAACGATTTACAACA AAAGCTTGCAAACAACGAAAGCATTATATTGATTGATGTGCGAATGCCTT GGGAATTGAAATTAGAAGGAAAAATAGGAGCGTCCATTAATATTCCTCGT AAGTAAATCttaaaagttattcttaaatCAATGCCCCGCTCCCCTAGTTC AGTTCCGTCAACTCCCCTTAAAATTAGTGTGTCAACGAGGAACTTTTCCC GCTTTCAAGCCGATATAGAATCCCTTCATCGATAAAACTATGTAATCTTT CCGCAGTAACAACCTCAAGATCTGCTAAAATATTGGAGAACGATAATGAA GGGTTGCAACATCTCCAAAATACACTGACAGCACCTTGCTGTAACGTAAA GGGGATTTTCCTTTTTAGTTCCAAAAATCAGTGATGCATTCCAGCTCGAA AAAGAACAGTTTGAATCAAGATATGGCATCAAAAAACCTAAGAAGGATGA TTGTAGTCTAATCTTTCACTGCAAATCTGGAGTTCGAAGCATGCAAGCTG TCACCATTGTGAAATCACTTGGATATACATGGtaaggaaatatttttact cAACCGTCAACGAATTCATATGTTTTTGGTTCATGAcgtaaaaaacattt aatttactGCCAATCAAATTAATAATACACCCCTATGGTATTTGAATAAT ACCTCAAGAACCAAAAACCTTCGAAACAGTGAAAGCTCATCTTTCTTGGG AAATGTAtatttaaagtctgttcacgataagtgtgcactcttttttcttt agctataacttttgaaggaattggagagatatttgtgagtggaacaattt gaagtaaaaaagtctttaaaaaaattctaaaaacgaagatgaaaatgaag gagaaaaaaatgaagatcttgtagagaagtgcgataacttcattttcact ggagagattctttgatcttaggaggtcatcactgtgaagaaatttcacta aaatatttattcaatataaagttatgatacaaagttaataNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNtgcacacttatcgtgaatagactttagagtAACAGTCCAGAAA GATTTCTTTATTACCGGATTAGCAAGACAGGGGGCATCATACAAAGTAGT TATATAGATTTAAACTAGAGGTTTATTCTAATTCACAACAGTTCCTTTGC TAGTTAACAAAGATTTTCCATGTTTTTTTAGCCCAAAGAGTCTAGATGGT GGATTTGAAGCATGgaaaaaaatctaccaaaaataaaatgatactGAAGA TTCAACTTTTGTCGAAGAAGTAAAAGAAGAAGGACACATAGCCAAAAATG ATTCTTCAAATTGTCTGgtaaattgttttttgtatGTATAAATGttcttt aagtttttttttctaatattcTTTGAGTTTTTGTGTTATACgttcaattt gtttttttagttACCTGTTTTCTATTATTGGTAAGATTGTTCCTGCTTTT CTGCTCTTATGGTtgtcttttttgttatttgtcttttttgttCTGTGTTC TCTGTCCTTTGTCATTTAATTGTTTTTCGTTCTATGTTCTctgttttaat tgtttttcatttttctctttgatctttgtttttttttattgtttaatgtt ttttgtgtgttttttttcttgttcttcgtttttctttacttgtttttttc ttgacgttctttttgttttttgtttttttgttcatCGTTACATCGTaatc ttttgttttagttttgtaTTGTATATTATTGTTTCTTGTTCTAATCCACA AAATGTTATTTTCAGTcgttattttgtaattttttgtaattttttgtatT TGACGCTTAGATTTAGATTAAATGTAATTTTTGTACACGCATTCATGTTT ATTTTTGTACTAGACTCGCTTTATTTTTATACTATGTATGTATGTTATTG TCGTTTTCTTATGTTTATGGataatgtttttcatttgttttttatgtttt ttgtttgcttttaccATGTTTTTATACCTGTGTcagatttttttgttaat tgttgTATTTCCAGTCGGTAAGTTTTTATGAATTGTTTCACTTGCACgtt gttttgttcttttgttccAGACTAGGTTTTGTTGGTGTTTGTTTCgtact ttttttgtttacatacaTCAATTATGTTTTGTCAAATTGTAAAATTATTT GTTGTTCATTAACTGTTTTGTTTAGGTCCCGATAATTTTATGTTTGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063253TCONS_00063253Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063253-proteinTCONS_00063253-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:175449..180746 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.05 0.02 2.4 2.83 3.8 1.39 1.59 2.84 10.09 8.17 3.21 7.51 5.92 5.7 0.06 0 4.11 3.25 1.94 2.36 9.23 11.45 0.5 0.1 0 0.04