XLOC_039657 (gene) - C. hemisphaerica

Overview
NameXLOC_039657
Unique NameXLOC_039657
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_385:279445..286549-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039657 ID=XLOC_039657|Name=XLOC_039657|organism=Clytia hemisphaerica|type=gene|length=7105bp|location=Sequence derived from alignment at scaffold_385:279445..286549- (Clytia hemisphaerica)
ATAAATAAAAACAGAAAATAATATCCAGCATCTATCAACAACAATTGTTA TGGATCCTTTCGAGACGTCAAGTTTTTCATCATTGATTGAACGCGAAGAG AGAGAAGAAGTCATCCAATTAGATCTTCACACAGCTGCTCTCATCGGTGA TTATGATATGGTGAGAGGTATGGAAGAGTTTAGTTTTATTCAAAAGGGTT TGAGATATATCTTTTTGGATCAAACCTCACAAATTCTTTTCCCCAACTAT TTTCCAAAGCCGAAATATTCAATAGTATAACTTTTTAACTTTTAGTAAGA TAACATTAGAATTGTAAGTACCGTGTAAGAACCTATTTTCAGAAATTTGA TATTGGGGTATCTCGACTCGAAAATAGTTAGGCAAATACTGGATTGTTTT ACTTTTACTTAAGACAACGGTAGAAGGTTTCTGCAGGCCAAATATCTCAA ACCATCTAACTACCCCTTAAACATTCGCCAAAATCTTTCGTATCGCAATC AGTACTTTGAGTTACTACCTCCTTACACATTAGGGTTCCAAACTAGGAAG GAATTCCAAAGTTAGGGCTGCTGAAGATAACTCAGAATCGCCCATAGTGT CCTCCCCCCCCCCTTTATAAAGGGGGGGATTCTGATTTTGGCCCTTTTTT TAAAGTATGGGGGAAAATGAAAAATTTGAAATTTGCTGGGGGANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTTGACTGGGGGAACTTCACTGATCTCAAGGTGAT CTTGTTGCAAAACCTGTTTAAGCAATAAAATCAGCAAATCTTTTGGGATA AACCAACTTTTCAATACAAGTTCATTTTTCCAGCACTTTCAAGGCTATTT TTTCAAGATTTCCAAAATTTCAAACTTGATTTAAGGCATTTTTATGTTAA CCATATGGGGAACCGCAAAATCTTCAAATAGCTGGGGGAATTCAAAAAAG AGGGGGGAANTTCCAGCACTGTCAAGGCTATTTTTTCAAGCTTTCCAAAA TTTCAAACTTGATTTAAGGCATTTTTATGTTAACCATATGGGGAACCGCA AAATCTTCAAATATAGCTGGGGGAATTCAAAAAAGAGGGGGGAACCGAAA AATTTTGAAATATGGTGGGGGAAATAAAGAGGGGGGAATGGAGAAAAATT TTGATTTTTAGTGGGGGGAACCAACCCAGGAGGACACTATGTCGCCCCAA CTCGGGAAGTCTTTCATAGCCTGGGACAACATAGAAAGCAGACACAAAAA ACAAGGGTTTTCCAAAGTGGCAGACGACTATACTAAATTTATGTCAGCCT TTTTACTGAAATAACTATGGATTTTTCATTCCAGAATTTAAATGAAAGAA TATTTTGAGATTTGGAATGAGCTTATTTCAAGAGATCTTCTCAACTTCAC ATAGTGTTATTCCAAGACCTCTATAATCTCTCTCGTTTGAGGATGAGCAG AAGTCTAAGCTAAAATCTAATAATGTTTTCTGTGTTTTAATAAAATTTCC TTGGTGTATGTGTAACCATAAACGCTTTATGCAACCTGGATACAAAATTA AAAATCATGTTCCGGCATTCCATTTTTTAGCTGAATCACTTAATTGTTTT CACTATTTTACCAGTATTAATAATAATCCACAAGGCATCCCTCCTATAAA ATCACTGTAGTAACTTACTCTTAAATTTAACTAATCTTACATTAGACTGC ATCCACAAGAAGAGTGATTTGGACCACACCAACCGTGGTGGTTGGACTCC TCTCATGTATGCTGCATACGTTGGTCGTGATAACATTCTCAACATGTTAC TCGATGCTGGAGCTCGTATTGACATCCAATCAAAAAGTGTGAAATTGGGT AGCACTGCTCTTATGTTGGCTTCCTATTGTGCTACAGAATCAATCATGTA TTTCTTACTACAGGTAGGATTTTTTTGTTAAAGGGATAATCAGATGGTCT GAGATATTTTGCCTGCAGATAGCTTCTAGGATTTTAGGAAAAACCTCTAA ATTTTTCGGTGTACTTATTTTCCTAACTCAAGTTATGCTAATTTGAAATC TCGAAAAATGGGACTTTTCAGGGACAAAATTTCAAAGTGGCATAACTTGA GTTAGGAAAATAAGTACACCGAAAAATTTAGAGGTTTCTCCTAAAATCCT AGAAGCTATCTGCAGGCAAAATATCTCAGACCATCTGATTATCCCTTTAA ACTCAATTCTTCACTCCTCTTTATCGTTCAGGTTTATTAAGCCCCTTATG GTGGGCTTTTCCAGAAAACAATTTGATACGGGGGTGGAGGATATAACATT TCTGGGAAATTTACCCACTAAACGTTGTGATTTTTGACCCCCGGACAGCA GGTCTAACTCCCTGGACAAGCATCAGTTGACCCCCTGGACATCAAAATTA CCCTAAAACAGAGAAAAATTACACCCAAAAAAGAGAAAATTTAACCCCCC CCCCCCCACAAGGCAAATTTTGGAGATTTTTCACTACCCCCGGACACTAT ATCCTCCACCCCCCATGTACGGGCATTTTATGGAAGAGCCCAGTTCATTA AAAAATCATAGACAAAATCGTTTGGTTCATAACAAAGATTAAAAAGGCAA TACCTAGAAAAGAGGTTCAAGCTAACGATCGTAGGAGCGAACCTCAAGGG TAAATTTTCAGACCCTCGTAAGGTGCATTGAGACCGTAGCAACCGTACTT CGGGGGTTCATTTTGCTGCGGAGAAAAGTTTGACGGGTTAGCGAGCGCCT CGCCAAAAACCGGGATTTTGCTACTACAAGAGCTTCGAAAGTTTAAAGTG ACGTAAAAAAGTCCTTCGAAAAGTGAAAAGGATAAAATAGTCTTCCCATT ATTTTACTTTCCAACTTTTTAGCACGGTGCATCGATCAATCTTCGAGATG GCGAAGGAATGACTAGTTTGTTTCATGCAGTGCGTCAAGGTCACCAATCT GCTGTCAAATTACTGGCATCCAAAGGAGCTGATCTAGACCTTGGGTAAGT CAAATAAATACATGCTTTTTCTTATAAGAATGGTGTTTTTTCATTTCATC ATGGGTATTCTTAATTTTTTGGGAAAAATCCTAAAATATTCTTACGGTTT TCTTTTGGGTAGAATCGAAATTTAAACTAAGTTTAATAAGAAAATACATT TCTGAAGCATAAAATGGCATTTTTGTCAAGGTATTAAACCTGGGATAGTT GGTAATTCAAAGTTAAAAAATTGTTCTTTAAATGCCATTCTGAGGGTTTG TTGCCAAGTTTCATGATGATGATATTATAAAGTACATTCTTACAAAAAAT ACGTGTATGTTTACAATTAGTATGCTGATAAAATAGTTACTTCTAAATTT TACCCACGAAAAAGATTTTTTCTATTACTTTACTGACGATCTTATTACGA AGTACCTTTCAATTACACACCCCGCTTCATCCCTTTCCACTGGAAAAATT GGTCAAAATATCGTCCCCAGTTGAAAAACTCTAATTTTTATCAGATATGA AGGTCCTCACTGCAAAATGTTATGCTATTTTTCTCATCCCCATTGACTTT TTTGACTTGAAAACAAAAGAATTGAAATCCCCAGCCATAAAAAATATCAA TCGCCATCAAGTTTTGGTCCGTTATTTTTATCCCACTGACTGATAAATTC CCACCGGAATTTACTTCAACGCTCTTACTTGGGTAACGTTATTTGAACCT CTTTTATTTGAACCTTTTTGTATCCATGTCATGAACTAAAATATTGTTCC CTTAACTGGATAGCCTTTAATACGGCTTTAAATATACTCTCCGTATTATG AATTTATCATTAATTCGAAAAAATTATTGAGTCCCTTCAAGATAGAATTA GAGATAATCAACACTGTAAGTGTCATTTCTTTCTCATTTTGTAGGCAATA CTTGACGGAGATCACGCTAATACACGCTTTTTTTTTATAAGAATGGTGTA AATCCATTTCATCATGTATATTCTTAACTTTTTTGGGAAAATCATCCTAA AATATTCTTACAGCATTCTTAGGTTAGGATCCTAATTGACTAAAAAATGG TCTAAAAATGGCATTCTTAGCTCGAGTAGCAAAATTCTATGATGGTGATA TTCTTCACATTTTTTGGCCATTTTCATCATGGACATTCTTTAAAGTGTAT TCTTATTAAAAAAAAGCGTGTAATGCTAATGGAGATAAGAACTCCTATAG ATGTGATGTTTCTTATTGAATCGTTTGTAATGATGAAATTTAATATTATT TCCTTTCATTTTGCAGGCAATACTTGACTGGGATCACACCAATCATGGAA GCAGCTATATCCGGACACGAACTCATCTTCAATATTTTACTAGACCATGT AAGTCTCCTATATGTTATCATCGTGACTTTTTTTCCAGCTCCATCACTCA CTTGATTCGATTACTAACTGAAATTAGTAAAATTTCGGAATTCCAGAGGG GTATGATCCTAAAATTGCCTGGAATTCCAAGGGGGTAGGTCACAAAAGGT TGGACCTTCTCAACAGGGGGTGTACGGTTTTTTCCTGGAAAAGTCTATTT TTAGGCGAGAAAGATTTTTCATTTGCTAAGACCTATTTTCGCCTTGTCTT TATTTGAATCATTGAATCATTGCGTCAGAAGAAGGCATCACAATTGCTTT GAGAGTTGACTTTCTGACTCCTTTCGTTAAAAATGCGAGAGTGTAAAGCC AAAAGTTTAACAATTCAAATAAGAGTCTATGGCTGTTTGGAATATTTCAT ACATTGGTGAAAATTAATTTCATTATGTTACTACAATCACCAGGGTGCAG ACATAACAAGGAGAACGAAAAAAGGAGAAACAGTCAAGAGTTTGGCCATG CGTCATAAGAATACATCTATAGTTGCACTGATTGATAAACACATTTCACC TCAAGAACCTACCAGAAAGGAACCAAGTAAGAATCAGTGTTGTAATTTTT CCTTTGTATTTTCAAATTTTCGAAGTTCAATTGCGGAGGAAGGTAGAGGC TTTAAATCCATTTTACAGGATGACGGGGGGGGTGCCCGGCCTTCGACCCT CTGAACGGGGACTAAAAAGGAGGGAAAATTGGAAAAAGTTGTGAATTTTA CGACCCCTATGGGACTAATTTGTCCAAATTTCGATGTTTTTAAGGGCAAA AAATTTAAATTTTCTTATTTTTCCGACCTTGAATGCGATTGAAATTTAAT TTTCTGATTTTTTTTAACCCTTACGGGCACTTGACTAAGTACCCCCCCCC CCCCCAAAAAAAGTTGAGGTCCCTAATAAGGTCCTGGGTACTGCACCATG TCAACCAAATTACTCATCAAACACAAAGCCTTTTTATAGCGCCCGTACAG ATTCATAAATTCCGGCTACAACACTGAAAAACTCCGTGATCTAGTTTGAT ATCTATCACTGTGAAGGTGTTTGCGATGCAAGATCAATCCTAGACTAGAG TTTACTTCTGACTAAATTTTGCTTTTTGATAACTTTTTGACGCCGAGTCC AGTCCGACTGAGCAAAGGCAGAAAATTACCATATACTACCGGGCCACTAA ATCGTATTAGGATTAAATAATAATAGGATTGCCATCCAGTCTATAAAAAA AGCTTTAAGTGGACCCCGGGCTAGGTCAATCCTCCATAGATCAACTAAAA CAGAACCTCGGCAAAAGTTTTTTGCCAATCGCGAAAATTTAATCTTCAAA TACAAATTTTTTGAACAACCATTAGCTCTTTGGAAATTACTCCTGCGGCG TTGAGATAATTTCAAAATAACTTTTTATTTCGTTTCCCTTATCAGCATTG GAGTTACACGACCAATTCGGTGCATCCATCTCATCCTCTGGTGTCATAGA AGGGAGCATCCAAGATGGACCTGCCATTATTGATTCACTTATGAGAAATG CTGCCAAGTAAGATTGTTTGTTTTTACGAAAATTTGAAAACCAAAATTGG AAGAGTTTTTTCAGATAGATCATGCAAAATACCTCCGAAACTAGGAGACC ATGTCATAGACTTCCGTATCGTTCCGAAACGAAAGGGTTCCGAAACTGCA GTGGTGTGACCGTTAAAATTCGAAACTTCGAAAAAGAAGACGTTACAAAG TAAAACAGATCAAAACGGCTTTGCTCCACTATTTTCATCGGAAAAATTGC TCCGAAACGTTTCGAAACCAATATGAACACTCTCGATCCGTAACAGAAAC CATACCGGCACGATACGAAACCGTAACGTCTGAACATGGCCTGATTTCCC CTGACTTGCTGCGTATAGCTTACTAGATAAAAATCGGACTAAATCTCCGA CCATGTTCATAGTTAACGGCTCTGCTTCGATCCAAAACGAAATGAAGCCG TTCTACTGGTTAGAAGTGACGTAAAGATTGAACTTAACCAATGGAATGGC TTCATTTCATTTCCGAGCGAAATGGAACCATAGTGTGTGAACCACAGATA TCTTATATAAAACACTAGATGGAAGCCTAGTTGAAGCAAAATAATTCGCT ATCTTGAATGAATTTTGAAGTCATTGCAGTGTCAAAAAAGTTTCAACAGT GAAAAACCAAGTTTTCAACTGCGACCTACTGTGGCCTACCTTCAGCAAAG ATGGCGGATTATTTTGCTTCTCCTGTCGTTGCTTGGGAAATGCAGAGTAG CTCTATTTAGTGTTTATATAAAATATCTGTGATGTGAACGTGGTCTCAGA GAGTAATGAAACGGAGAACTTTAACATGAATTATTGATATACATTCTTGA TTGACTTCTTCGTATTTCCTTATTTTTAGTTCGGCGAGAAATCCAGATTT TTCTGAAGGAGCACCCGTGGCATCACTTTGTCCAGAAATACAAAACAAAC TCTCCATCCAAGGTCAAGGAGGTCCTCCACCGCAAATTAATAACCCCGTA TTTCAAAATGGTATTTAATTTTTTCTTTCTTGTCTTTCTAATTCCGAGAC CAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063280TCONS_00063280Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063280-proteinTCONS_00063280-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:279445..286549 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.01 2.33 3.06 2.55 18.1 14.4 21.7 22.92 14.74 23.86 13.91 10.12 18.85 14.35 17.98 18.68 15.23 11.35 13.75 18.23 5.22 4.57 6.65 9.23 6.66 9.29 7.59 6.55 10.91 12.72