XLOC_039665 (gene) - C. hemisphaerica

Overview
NameXLOC_039665
Unique NameXLOC_039665
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_385:454907..461783-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039665 ID=XLOC_039665|Name=XLOC_039665|organism=Clytia hemisphaerica|type=gene|length=6877bp|location=Sequence derived from alignment at scaffold_385:454907..461783- (Clytia hemisphaerica)
TAAAACTCTATAAAAATTAAAGGATCTTTACTTTACGACTTTTAAAACCT TTTAAAGGTATCAAGCAAAATGTCTGACGATGAACTTTCAGAGAGTGGAG ATCTAAACATTGGAGTAAGTGTATTCTAAACTGTCCCTCCAGTCGTTAGC TGAATTTCAGTCCCAACCTCTTCTGGGTTCTGTTAAAAAGTTCATACAAA AATTGTGTTTTAGTTTCAGTTTTGTTTTGCTTTAGCACTACGAAGGCGAT AGAGATGAACTAGAAAGAAGACATGGATTTGGGAAAGCATTCTTTCCAAA CGGTGACACATACGAGGGTGAATATTTGCATGGAAGACGAAATGGAAAGG TAACATTCGACAATAGCTTATGTACGGACCCGGGATTCGACATTCTGATT GAGCCCGGGCCCAGGGGAGGGGTACTAGTTTTGCGAGATGTCCGAGCCAA AGTTCGAAAATCGACCCTTTGACTTTGAGAAACTGAATTTCAAAAGTTTT CTCCATGTTTTGACGTTTTTTCCACCCTCCGAAAGACTATTTACCCCAAT AATTGATGACCCTTTCAGTGAGTTGATTTTTGATTTTGGAAATTTTGAGA ACTATATATACAGAGACGGACTTGCTTTTTAATGGTTTTTGCGGGGTTTT TGTACCCCTTTGAGGGACTTTTCGAGAGTGTGAACAAGATACCCTTTAGG TACCCTTTTTTTCTGTTTCTTCAAGGCTTCGTTCGTTCGTTCGTTCGTTC GTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTCACA CTTTTTTATCATACTTCAGGGGGTCTACCGTTTTGCCAGTGGAGCTTTTT ATAATGGTGACTACATTGATAACAAAAGAGAAGGACGTGGTACATTCGTT TATCCCGATGGTTCCAAGTATGACGGTAAGAATTTCCAGATTATATTTAA ACTAAAGTCTGTCCAGATATAATTGGCAGTGGAAACAAGAATGCCTGTAA CCTTTGATAGTCAAATATAATTATGGAAATTTTTTTTGCTTGTTTTAGAG AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACA GAAAAGTGCTACCAAGGGGTATTTCGGGTCCCATATCTTCCGAAGGACTT TTCTGTTTGCCTTGAAATTTAACAAACTTCTTAACCTAATGTTGAACTAC CACTGGTGTAAAAATGAAAGTTATAGCATAAGTAGAAAAAAAGCTCCATT TTTACAATCGCAAATTTAACCGCTAAAAATCGCGAATTTTTCAACCAAAA ATACATTCAAATATAGCGCTTATGATTCTCTGAAACAAGCAAAAAAAATT TCCATAATTATATTTGACTATCAAAGGTTACAGGCATTCTTGTTTCCACT GCCAATTATATCTAGACAGACTTTAGGTCACAGTGTGGATCTAAACCACA CTGAAACGACCGCCTTCCTTCACGCATCACGCACGCTCGCGAAAGAGCGC GCGCACATTGCCAACGCCTACATGTCATCTCCAGTACATTTTAGATTATT CATTGAAAACAGATTACAATATAGTCATTTTTCACGTCTCGATTATTCAA TTACGAATAAAAGACATTCAGGGAAAAAAAAGAGAAACACCTGGGTAATC TAGTTAAAAAAACCGAAAGTAAATGGTAGACAAAGTAATGAGCCAAGGCA AAACGAGATTAGCGCACCACTATGAAAGAAACCGCCTCCGGCGGTCGAAA ATCATTATCACCGAGTGAAATTGTAATAGTCTGAGGAAAATTGCAGTAGG GGACCAATCATTGACGTGATGATTAAATTCTTACCATTTTAGATTCATTT AAACGTGTTTTTAAAGAACAAACTACATAAAAACACAAGGCTTCAATGGC CAGGATGTTCAGAACAAGTTCAGAACATTTCGAGGCTTTACAGTCTCCAA AACACCCAATTTTTAGAAAAATGGACAAAAATATTCACAAAATGGTGAAA ATAAGAACATTCTAAATACATTTTCTGTCAAGACTTGAAAAACGTTGGAT GTTCTTATAAAAAAAAACGTGTATTCCAATTTGTTCAACGTTTAAAACCA AATAAACAACAATTTGCTGATTCAACTTTAAAGCAAGCTTTATTTACAAT ATAGGAAGGTGGGACCTGGACACACGCCATGGTTACGGTATATATGAATA CGAGAATGGTGACCGGTACGAAGGCGAATGGTTCCGTAACCGGAAAACTG GAACTGGGAAATATTTCCACAAAGAATCAGAGTCGATTGTAAGTTCCGTT ATGATTAACATTCGGTCTTTAATAATGTATTTTACAATGTTAATTATTCA GTCTACAAAAAATATCTGAACAAGTAGAACTCCTCGCTGGTCTAAAATCA CTGTCTTGTTTCTCGAAATTGCGAACCATTCAAAAAGCAACTAGAGGGCG TAAAAGCAGCGAATTCACTGACATCGGAGTGAAAAAGATTTATAGGGGGT GTTAGGTATGACGGGGACACTAGACGATCCTATCGTCTACATAAGTGACT AAAAAAGGGAATAATTTATGAGGCAGGATAAATTTGAAAATGGAGTTTAG CACGGGGTGGAGTAGGCAGTGGCGTAGGTGTAATTACAGCGTTTGTTCCA AATTCTACCGTCACTATTATTTTTTTCCGTAAACCGCCGTGATGGCAGTA GACTCTGCGCATGTAATTTTTCCTCGTTTAAGTACTACATGTTTTTTCTT TCATAAGCATAACGTTTATGAGCATATGCAGGCTCAGTTTTTGGTACCTA AACAATGGCTCTATTGTTTGAGAACAATAGAACACTAAGCATAATGCGAG CCTGACATAGGGACAGACACTTGCTTATAAAAAAAACATGTATCCCTCTA TCATCTACAGGGACCCCCACCATCAATTTTATGGATAACATGGACGATTT TAATTGAATTTTTATTAATTGCCACCGGAGGAAGCCTAAAGCTTCTGAGG ATGGCATTCATAGCTTCACGCATAAGGAAGTTGGGCAAACATCTCATCAT TTTGCGCGCGTTTTTCAGTATTTTAGTTCTGCTTAACGGTAGCATTCTTA TCTTACGGTCTCTCTATTGTTTTATCATCATCAAAAAGACTTTTCCGGAG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTTTCCGGAGTTATTTTGATCTGATTACTCATTTTGAAATG TCAGTTTGTCTTTTTCTTATCCCTGGAGAGTTAAATGAATCTAAGGAAAT TCCCTTTTCTGGGAATTTCCCTTTTTATACCACAAGTAGTTATTAAGCAC TCTATATAGGTTAAAAATATTACTCTACTCAAAGTATTCAAACGTGTACA TTAGTAAAATAACATATGAAGAGCAGTATCTTCAGATATATACGCTTTTT ATAGGAAAAACCAGTAAGTCATATGAATCTGGCTGGGCTGCTCTTAAATT TATGTGAGTTTTTCAGCCTTAAATGTCAATATTAATTAAAATGGAAACAT GTACTTCTCAGTAATTTCTGAAATCTGAGGTTCAGATTCTTCTTAATTTG TTCTTAGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNACGGATGTCACTCTAAGTAGACTGTAAATCACTCCCTTGACACAT TTGTTAGCATTTGAAAGAATTTTCTCTCAGATGAGAGGTCACTCTTAACA AAAAATTATTGTAGGGCTAAGATCATTCCTTTTGAACGCAAATTCAACTC TTGTGTTCGTTTTTGCTGCGGTGGCACCTTAATGAAAGTTATGGCTAGTG ATACTTTATAGAGGAGATTTTCATTCAGCAGATGCTACGGTGGACTATGT ATGCTATAGTTTAAGACGAATCACTATCTAAGAAAAAAGCCCAAAGCCGA AGAAAATTCGCAAACAGGTGTTTTTTTTGCCGAAAAGAGTTTACAGCCGG TAGAGTTTGCCGTTTCTACGATACTCTCCCGCCGATTTTTTTTCCTGTAT ACCGCCATAATGCCATACTGCCATTTTTTCCCGCCTTTACTATACTGTAA CGGACGATAACATCGTCTAATGCTAGGGTCAATCGGCAAATCAAAAAAAA AAGAAGAGATTTGAAACTGTTGATGACAATAAGAGGGTTACAACTGGCGG TTAAATAATGGTGGTGTTTGTTTTATACTTTTAACATCTGATTTCACTTT TCAGTCCGAAGGTCAATGGGTAGATGGTAAGATGACGGGCCAAGGTAGTA TTCATTATGGTTATTGCAATTTCCAAGGACGATTTAACGCCAATGTTGTA AGTTATAACTTTCATGAGTAGATTTTTCATGAGTCATTTTCTCCTACCGA TGCTAAAATTTTGAAATTGGGACAAAGCAGATTTTTTGTTTCTTCTTTTA ATAAATAAGATAATTCTTTAGAAAGTTTAGAATATTCAACAGACTGTTTT CAGCTAAAATGACGCTAGCACCTGCCCACCGGTAGATTTCTTCGGTTTGA TAAATAAAGGTTTGAGCCATACCCAAGGGGCTCAAGAGCCTACAATTTTT ATAATTTTCCCTGTTTTATAGGTCAAAGGGGTTGGAAAATTTATTTTCCC AAAGAGAAGGATTGAAATCAATGGTGTCTACAAGGCATTTCTACTTGTAA GTATTGATATTTTTTAGTATTCTTAAAATCTTTTCTAGATAGACCTTTTC ATAAATTACGTCACGAACATCACTTGCCTTGTATTCAAACAATTTTCATG GTGATTATGTCTCTTGAGACAACAATAAATAATTTTTTTATGAATAGGAA GTTGTTTTAATAAAATCCACTGGGAGTTAATCACCATGGCAATAATTTCA AAACGAGGCAAGTGATGTTCGTAACGTAAATTATGAAAAGGTCTATTTGA GACATAAATCAATCAACAATAATAGAATGGAATTTCCAAGTCATTTCGGA CGATTGAAAAATTTGTGTATTCGCCCTGTAGAATGAAAAGGAAATGTAGT ATTGGAAACTTGGCCCGAAAATTAATTTCATTTTTCGGGAGAAAACTAGA GGTCCAATTTTAAAGCCCTGTGAGATTGTTTTAACTTAAATGATTCTATT TGAAAGTAAAAATATATTTCAAAGTTGGTATTTTCCACAATAAAAATATG ATCGATGCTGAGCAAAAAAAAAAATTCTACAACAACTGTAGCTATTCCAA GGCCCATCTTCATTTCGATCTGACCTCAAATCTTGGTTAGATTACATCGC ACTAACGGCGAGGTGCGTTTTTTTTATTTTGATGTTGGTTTATACCGTAG TCCTATGAAATGAAAGATATCAGAACTTCGGAGTCAGAGTCTCCCCCTAC TTTTTAAGTACAGTCAAATCTCTCTATTATTCGAGTTTTTTTTAAATTTG AACAAGAAAGCTTAAGCTGCATTCAGGCCCATCAGTTTTTTTGGTAGTGT CAAAATATTTTTCCGTTGCAGCGTCGCCATGTACAACTTAATTTATTGGA GTGAATTTTTTCGATTAATAATGAATTAATTAGGTGTTTTAGTTCTTTTG AGAAAAATATTTCTTACAGTTTAAAAGGAGCGATTTGATCATATTACTCT GAGGTATTAATTATATATGGTTTATACTTAAGCATCCGCACACAGTAAGT CAGATAATTTAATTTTTAGCCTGGACTCGTCAATTGATAATTGCGCCCAC AGGCGCCTACAAAGTCAAATCTTTTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063293TCONS_00063293Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063293-proteinTCONS_00063293-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:454907..461783 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.07 0.08 0.16 0.69 0.31 0.19 0.26 0.49 0.99 0.15 0.34 0.05 0 0 0.09 0.44 0.73 0 0.08 0.64 1.14 0.42 0 195.56 170.75 0 0 0.24 0.17