XLOC_039696 (gene) - C. hemisphaerica

Overview
NameXLOC_039696
Unique NameXLOC_039696
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_386:58963..64014+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039696 ID=XLOC_039696|Name=XLOC_039696|organism=Clytia hemisphaerica|type=gene|length=5052bp|location=Sequence derived from alignment at scaffold_386:58963..64014+ (Clytia hemisphaerica)
GGCCGCCACCATCAAGCAAAATATTGTAACTGATGAAAATGTTCACCATG TTCACTGTTATGGAATTCTGAAACAGAAAGAAAGAGCAAGTTTTTCATAA GAGTACACGTTTTTTTTATATAAGAACATCCAAAAAATTTTAAGCCTTCG GATGTTCTTAACTTTTTGAGTTTTGAGCCTAAAAATGTTCTTAATTTCAC CATTTTGTGAGTATTTTTATGCCATTCTCTAACAAATTGGATGTTTTAGA GTCAGCAATGCCTTAAAATGTTGGGATGAGCTGGAGTTTTTACAAAATAC TTCACTAATTGTTCATTTAAAGTGATAGAGATGACGCGTTCTTTATAAAA AGTAATAAGATTCTTTTATTACATCTTAACGACCAACCAAATCAAAATGT TCTTAACTTGTTCTTAAAATTTTGGCCATCGAAGCCTTATGTTCTCATAT AGTTTGTTCTTATAAATGGACGTGTATTCAATGTTCTTAACTTCTTAATT TGTTGAGTTTTATGCCTAAATATGTTCTTAACGTTTGTTTGTATTTTCAC TATTTTTACGGTTTTTTGTCCATTTTCAAAAAATTAGGTGTTTTAGGGTG GTCCACAAAGCCTTACAATGCTCTTAGCTTGTTCTTAATATTTTGACCAT CGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAAAGTGTTTTCA GCTGAGGTAAAATAACGGCTTGCCTCTGACCATGTTCATTTTTCAGAAAA TATCTGACGGGACCGTGAAATTACTAAATAAAAAACCACTTTCAGGGTTG GAATTAGAAATAATTTTAGATTATATTTAATTTGAGTTTTTTGACTACAT AATCTATCAGGGTCAAATTTCGTGTGTTCAAATATTGATAAATAATTACA TTTGaggctttattttttgaaactgCCGTTGTACGttcccgtcggccgtc aaggttgGTGCTACCCGGTTTATTAGATTGAAAAGTAGTAAAGTCTCGGT AAgaagtaaatttttcttttgattgcCGTTACAGTTTTAGTCGGGATTTT CGAAATTGCAACTATAAATTCTATAAATTTTATTTCTAGACCTGAAATTT ATTAGTTCAAGATGGCTGCCAGTATAATTCCATTTGATCCAACCATCACC CTTGGAAATGTTGTCAATCCATTGAAATTCAAGGTACattgttctctaaa aagtgCTAGCTATTTACAGCATTCAATAAAAACCAGGAGTGTTGCTGTTG CTGTTTTGAAataaccagtaaatttttgtagAGTGTTGGCTGCTCTCATT TTCAGCATTTAGAACCACAAGCTGTTTTTATCCTGTTcgtatttttttag aaaaattgaggTACTTGCAGGCTTACTACGCTGTTTAAATTGTTTTTCCT CTGATTGTCTcgaaattcattcattcaattCATGGCATCAACTGTATtaa gttgttcttaattttcaattttttgatatcTTGATTCTCGTTCTTACGAA attgttttaataaaaaaagattcGGTAGCCAagaaaaaatggggaaaaac cCTTGCAGATGACTCACTCCGCTCACTCCACTCCTCACTCACTCACTCCA CCCACTCTTCACTCTGAAGATGATAGCTGAAAGAAGGTTTTTAACGAAGA CTTTGATTATTTTACTAAATTCTTTTTCCTAGTGGGAGCTTCTTAGTTTC TCAATATTGATACGTGAGATTTTAAGAacgtaaaatgaaaatttcaaaat cagttttttcctttttataacGAAGGAACTCGAAGCAATTGGTAAATTGC AAATGGAAATTGACACAAAACAAGATCAACTAAATGGTCTTCTGGCTGGT AAAAGCAGTTTAGATATGATCATCCAAGAAGTCAAAGCCATGAAAGTTGA CCTTAGTGAAGCTGAGCTGAAAGATGCCTCCAAAGCGATGGATCAAGAGA TTAAGAAAGTTATGAAGGAATACGCTTTGGTTCAAATGGGAAACTTACCA AAGATTCAAACACATAAAGCTAAGATTGCCACCATTGCAGATCACGTCGA ATCACCCATGGATTACAACAAATCATTGTAGGTTTACCTTAGTTGAATGA ATTTtcacttcaatatttttttacgaAACGTCATTCTCTTTTATTTAGCC AAAATTCAGATTTAATAATTTAAATTATTAGGGTACAAACTTCAGTTTTT TACTTTACGAATCTGCAACAATCAAATTTTGGTACACCTGTTTTAACTGA TTAGTattaccatagtataagaaagccgcggctggaatgagtacagctga atttctgttgttctatctatgtcgtaagaacgaatttttttatggtGCAG TGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNGTGACAACTTCcattgtcaatttaatttgacttttaac aaactccctcgttagacgtaattttgctcataaacgcaaatctcttgata attcacgcattcataatcaaagtaaaagaaaagactcttgatttaaaagt actagaacgtcagaatgtcagtgctttaagaaaattgagtgcctcgaaat gccttccagattattttgaaaaaatcttactggtattagtaaataaatat tcaagctgcattctgtgaaaatttcatttaaaaaacaaCAGTATTAAGGT GACAGCAAGCATTCaaagtttaacatttgaaaattagttcttttaataaa atgtgtgttatttggtcctaaatttatttggaatttacaaaaatatactt caaataaggtgataagagaggacagtgagaaaaatttgagacttgaaaag taattgttcttcaattgaatattatgaacacttttaaggttaaggatttt gttagcttcgacttagttcttataaatcacggagacacagatagaacatc cattAACGACAAGAACAATAGCgtcatcattccagccgcggctttcttat actatggtatTACCATCAATAACAACTATAATTGCCAGGAAAGCTTTTGT TAAAGCCTTGGAGCTATCACGAAAGAATACGGTTAGGTTCTAGCGCTTTC GTCCTAAGATAAGCCTAAAGTAAGTTTTAATCTTttggtacacgttttta tatAGGAACAAACAAGTCTTCGATGACCAAAAAAATAAGGtcattttaag aacttttttagtcttgaaagatttttgatgttcttataacaaTGACGTAC ATTTTTCTTGACATTGAGCTTGTCCTTGCTTTTCTTTTCATGCAGGTTGA AGAAGGATTTACCAATCAGCTCGAACACAATCAAGTTGAATTCCCAATAC TTCACATTCAGTCAAGAATCGCAACAAAGTGAAGCCTCCATGGCTGCAAT GAAGTCATTCGTCAGTGGAGAAACCAAATTCTTAGGTGACACCATTGGTG GGAAAGTCTCTGCCGCTGTTCAACATCAAATGACCAAACAAAGAGAGCTA CATGAAATCAGTGGTACTTTGGTCGTCACAGCAACCTGTACTCACGCTAA TGCTGCCATATTTGCTCCATTCGTAATAGATGCAGACAAGGCAGTCCATG CTTGGAACGATACGTTCTCAAATAAGATAAGTATGCTGACagaagaagaa atgaaaaagCTGGCCAAAGAAACTGGTGAATCTGACAAACTTCATTTGGT GTCAGGTGCTACTTATGGATCTTGTTTCGTTGGTATGGTTCACACCAAGA AAACTGAATCTAACGAGGATACCCAACGCATGTTGTCCACTGCTCAATCC ATGTCTGCCAATTTCGATATTGGAGCCTTCTTTGCCAGCTACTCTGGTGG GTTTGGTGTAGACTCCAGCTTCTCTAATGATCTGAAAGCTCTTTTGAGTA GCCAGATGGTGTCTTCACATGTCAGCTTGGTTTGTGAAGGTTGTATCCCT ACCATCACCAGTAATAAAGTGGAACTTGGTGTCAAAGCGTTTGCTGACTT TGATCCAGCTCAGACCATGGAGAAACTGGCAACTCTCAATACTCAAACCA ACAAAGCCAATGAAACAGTGAGCAGTGCTGCAGACAAGGCTCGCAAAGGA AAAGAAGTCACCGAGTTGCGTGGCAACGAGATCAAAAACACAATGGCATC ATTAAGCAAGATTGATGAAGGCAAGGATAGCGTGCTGAATGTCAACTCGC TGATGTCTGGATTGGAAGATTACGTCACCCAAGCCAAGGAAGCCAAGACC GGTGTACCAATCAATTTCTTCATCAAAAGTTTGACCAGAGCTGACATTGC CAAATTATGGCTTGACAAATATGCCAGCAAAGTGCCTGAAAAAAAAGCCG CGTCCAAACCAAATCCATCAGGAGAGAAACCAAAGCCAGAGAAAGAGGCA GCTGACCCAATGGCTGGACGAGTAGAAGAAAATCTTGAAAGTGTGGGTCA ATTCTCAAAAAGTTGGGACTTTCAGTGACACTATTGACGTATTGTGCAAT TCTTAACGTCCATTGCATTGACAGTATCTGTACCGGAGTCTAAAAAAACA ATGTACGGGGAAAAGGAATAGtgaaaaatacatttatttataGATTTGTC AACGGTATTTTATGTTTTGAGAAGTAGTATACCTTATAGTAAACAAATTa ctttaatttttgaatttgaaaattggctttaaccttctgaaaaaaaagtt ttggtccttattttcctttcaaaacctttttttgttttaagtaAGTGAAA TATACGGACGACTAGCATAGTTTTGAAGCAGCCTTTAAACTACACTCCTA agtgatatttttatttgaaaacaaaaggtCATAGCTTAACAAAAAGGTCA AATCTTATATcaattttgtaagtattttctAATGAGGAAATACCTACCTA TGACTAATTTATCAAAAGTTCTGCTGATACAATATCAATATTTTGCGGTT TTAATATTTCTATGCTGTATGTAAGGATAGAcatttacaaaaatgatttg GA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063347TCONS_00063347Clytia hemisphaericatranscript
TCONS_00063348TCONS_00063348Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063348-proteinTCONS_00063348-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_386supercontigscaffold_386:58963..64014 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
306.75 309.81 341.39 306.67 58.89 58.02 700.55 756.03 263.48 344.39 514.16 164.8 0.11 0.02 0.03 0.07 49.26 59.2 0.61 0.02 440.93 434.02 314.53 761.7 897.48 355.18 3.98 5.46 15.78 20.88