XLOC_039771 (gene) - C. hemisphaerica

Overview
NameXLOC_039771
Unique NameXLOC_039771
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_39:300045..308843+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039771 ID=XLOC_039771|Name=XLOC_039771|organism=Clytia hemisphaerica|type=gene|length=8799bp|location=Sequence derived from alignment at scaffold_39:300045..308843+ (Clytia hemisphaerica)
TATAAAACTTTTAAGAACataaaggagagaaaaaaaacaacgtcgaaaat ttgatttgttttttcaaTCGCGTCAAACGATGTAGTTGACTTAAGATTTT TATTTGATCAAAAAGCTAAGACAAACGTTTGACTGTATATATGGATAAGG GCTTAAGTCGAAACAGAATTGATATACAGTTGGTTGGTAGCTGGCGAGGA ACAGAACTTCGTGCTGTTTATAAGCCAAAAGAATAATTGAACAAGTTAGA AGACCGGATAAACTGGGATACGACAAAAGCAATTTAATTGAATTCAAAAC ATCCTGGAAAGTGTTAATTTTGCGACAAGTTTGTGTAAGCATTAAATCCA AAATAATATTGAGCAGCTGATCTTGTGAAAGACAACGTGAAAATTTTTCA AGATGGCATCCCATGAGAACGGAAAGTTGATGATGGAAGATGGTGTCCAA TACTCAGGTAAGAAAATCAAATATCCATTGGTTAATTACAGTATTTATTT CCTTAGGGGGTAGTCAGAAAGTATCTATTATGGGGGTTAGGGATCCTAGG GAGGTGGGGGAGAGGCGTCAAGATTGTTTCCCACccttaggggggggggt ccaaaaaaatttcatgtcattttAAGTGGCCTATATTTGGATGGGGatgt caaaaatatattgacTGGTTAGAGGGaggattaaaaaattttttgaagat atcAAGTGGAGGTacaaattttttggaatttttgaaaatatcctccAACC TACCCTACTACATACTTTCTGACGACTTCCTTAGCTGGCACAAAAGGTAA cgttaacgttgaaacaatgttttgtATTTGCTGGATTATTTGTGGGTCAT atcgttgaaaaaatgaaacacAACTTAGATACTAAATCAGGGGTGGTAAC AATGAGTGTTAATTCACATTTGGATGatcttattccttaattaccttttt ttcaagtttaagTTTAGCAAAATAATCCCTCAAGTTGTTACAAGAATCGA TAATTTACCTGGAAATCCCAGTAAAATATAGGAATTTCTCAGGCATCATC GAGTCTTTCGATTATTTCCACATAGTCCACTACAGTCACCGGCACGACTA TACTAAGAACTTAATTCATATAAACGGAACATTGCAAGATTCATTAGTAT TGTATAATATACGTATTTTGATACTTTAACGAGGTAAAATTTTGTGGACC TCGCGGATTTGgttgtcatccgcgaaattaagtcgcaatggaaatttgga aaggccttatccgcaaaatatttttaaacaaaactcaaagaaaggcaaaa ataaactactttttgaatggttactgGTATCTCGGTCAAATATAAACatc ctcttctcacagacccactgggaacccttccaactgaaaaaattagcaaa aatattgtccccagtggaaaattatattctaatttatgtccccgctgaaa ataatcaaataggctaatccccactgcaaaatattgtgctagtTTTTCCA TCCCTACTTAATTTCTTGCTAAATACCCCCAGCCATAAATCACATGGGAA TATCAAGCCCTATGGAGTtatggtccgttatttttaaccccactggctga aaaaaagtCCACCTactgggtttgtgagaaggggtgtatatAAGGATCCT AACAATTTGCTAACTTTCGTTTCCCCTATCCAGTTGAAAGGCGGCttaaa ctaggtcacagtgtggatgtaaaccacactgaaacgaccgccttccatca cgcatcacgctcgcgaaagagcgcgcgcacattattaacgcttaCNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggtagacaaag taatgagccaaggcaaaacgagattagcgtaccactatgaaagaaaccgc ctccggcggtcgataagtATTTTCTGAGCCATTAAATCTATTGTTGGCAT TGTaccgtgttcttataaaattgttctagtAAAAAAAACGTTGTAGCTAA GATTTGTTTATTCTAGTGACAATTTTTCATTACTTTTCTATAGTAACTCC TAGCGAGAACCACCGTTAGTTTTCTGTTCAAATAAACGTGATCAAATCCA ATTTGTTTTGAGATTCATTGTGTACATTGGACTAAAGTCTTGTTTATATA ATTTGGGTTACAAATCTATTTTCTTCTATCTGCCGAGAGTGCTCAATAAT ATCAGAGAttgttcaaattaaaagaaagagactttgATTTATTGTTTAGA ATTTTAAGTTTCATGCCGCCCGTATGGACGACAATCAGCTGAATTAATTT GGTTTAAAACCATTCCAATATAGTAATAAAACAGCACTTAACAGAGATTT GAACTTCCAATTTTAAAGTCATTATTAAAGATTAAATCTGTCTGAATATT AGTctatagtctagcaagctagacgactaattcatacatagtagaaataa agcaaaaagtaattttATACAAAACTAAAttccgtaacaataatcgtatt atcatgtAACGCCTATACtaattacacgcattataaacgactccagtcta tctgaagttgtaaaaataatcaaGTAGAAAAACCCCGTTAAAGTTGTTTG CATTTTgtcctttgaaaaatctttattcACTGGGTCTGTCAGCAAGAGCC TCTATCACAAAAAAGGTGCTAGTCAAGCATAACAGACCTATGGCTATGAT GAAACAGATCTCAGGCTATGATGATGGCCATGTTATATGTATCTCACAAG AGaaacaaacaatcaaacaaacaatCAAGCCTCATAATCCGAGCTAAGCT GATTGTCACATGAAAACGAGACTCGATGctaaacttttaattcaaaGAGA CAAACAGTATGTAGACAGATCAATTTGCTATTTTAATGACGAGAGCAAAT TAAAATGTTTAAGAGGTCAATTATCTCCTGCATGTCAATCAGATATTATC AGCATGTTACACATCTCTTTGGTGGAGATAAATCACACTGATCATTAAAT TGGTGTCAAAAGAACGGGCAAAGAAGCCATGATATTACATATTTCAACAC TTCGACTACCTTTTTTTACTAGGGCATCCGGAGGGTGGGGGGTCAAGATT GACAAGTGCAATTacattgaaattttgaccagtgataGATATGGATAATT GAAGGTgatttataatttcttttttcaacgtGGAATGACTCGGTTATCTG TCTGGTTGATAGAAAGTAAAGTTGACTGAAGTTGGCTCCTGAAGGCAGAT TTGTCATATGAAAGAAACTagtaatataaaaaaaattcgttcCCATGAGT AATTGGTACCTTGCAGAACCTGAAAAATCATctttaaatattcttacagt attcttaggttatgAAGCAAACCCAGCCTAAAAATCTAGCATGTATTATA TACATCCAAGCAAGAATTGGGAATTTTGGTAAAACTTATAAGCATTGCCC TCCTGCGTATAATATCatcagagatttggaaaaagaggataagaaatgcg ctattcatctatttgaagctaggctgtagaatcttttgtttctattgaaa tgtctgctgccgatcgattgttttcgttctgaaccaatcagagcgcttga ttcgttatgcgcacaagactagaagtacaaacaaaaNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TAACCAAAGTGTTTCGTTCAAACAAACGTGAGTCATGTGTTTGGATTATT TTCATTCTAACTGGTGTTTTGTTCGCATCTGTGGTCATTGGTCGGCTACT TAGCAAATATTACAAATTCGCCACCTATACTGATGTCCAAAGAATCATAA CCGACCATAACACATTACCTAGTCTCACTGTATGCGATTTTAAAGCCATG CAGATTGAATATTTTTCGTATTGCGGCCAACAATTTACGAATTGGAATAA CGGTGATACCATTTGTGATTATACGAAAATGATGAATTTACCGAACCCGG ATGATTTGCCTTACCAGAATACGTCGGTGTGGAGAAACGCATTGTTCGAG GTTATCCATTGTAAAACCTGGAGCACCGAAACTCCGTGTACAAAAACACC GAATATAACCTCTCGAATGAATGGTGCATGTTTTACATGGAACTATAATG GTGATTTCCATGACGATTACGGACATTTAGAGTTAAAGTTCAAGCTACGG AACAACGACAGTATAGAGCAACGGGATATCGTGGTTTTACCTCACGATTC AGACAACGTTGAAATCGACTTAATGAAACGGATCGCGATTGAGTCGGCGG TCAAATATCAAATCACGATTGGGAAAACGCTGCTGTTACGGAAACCGGAG CCATATTCAGGTTGTCAGGATAGAGCGGGTTCGGACGATTTGGACATCTT TCCAGGTGCTTATAGTCGACACACGTGCATTGAAACGTACAAACAaatga acattttcaaaaaatgtggcGGAGTTTTTGATCACATTAGAAAATACTTG CCTGAATCGTCCATCTCTAGATATGAAGATAAAAACAAGACTCTGAACGA AATCAAATCGTGTATTGGCAAAGAAATCGAAGCAAAGGGGCCACCTAAGG AGTTATGTCCCTTCCCTTGTAAGGAGTTAGAGCTACGTTTAAGTCCACAC AGCTATAAAAGTTCAGAATCGAAAAAGAATGTATATGATGTGGAGTTACA ACTGGAGAGCGTAGATTCTTACACCTTGATGGAAGAACAACCTATTTACT CCTTGGAACAAATGAGTGCGGAGATTGGTGGATTTTTAGGCTTAGTCATG GGTGCATCCCTATTGTCTTTTATTGAACTTTTTGTATGTGGTATGTTATT TACTTTCAGGAAGGTGCATGGATAGATAAGACATTAATGGAATACCAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063458TCONS_00063458Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063458-proteinTCONS_00063458-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_39supercontigscaffold_39:300045..308843 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0 0.11 0.1 0.06 0 0.06 0.06 0.08 0.02 0 0.12 22.73 21.68 0.61 0.52 12.57 21.23 39.59 60.24 24.65 22.88 15.74 4.29 21.68 6.78 1.37 0.82 0 0.03