XLOC_039825 (gene) - C. hemisphaerica

Overview


Name	XLOC_039825
Unique Name	XLOC_039825
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_392:63481..75848-

gene from alignment at scaffold_392:63481..75848-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_039825 ID=XLOC_039825|Name=XLOC_039825|organism=Clytia hemisphaerica|type=gene|length=12368bp|location=Sequence derived from alignment at scaffold_392:63481..75848- (Clytia hemisphaerica)
TCACTTGATTTCAGGACATGTTGATTCCATATTTCTGTATCACAACTGAC
ATTTCAAGTTCTAAAATGAAAATCCATCAAACAGGTATTCTTGACCTCCT
GTGAAGTTTTTTTTCATAAATTGTTCGTTTTTGGATAAACTGTAAAATAT
CATTTTAACATTGGTATAGCATACTTAACCTTTATAGCTTTTTGGACCTA
CCCCGGTGGGGTGGAGGTCCTATAAATTAACCCGTGTTCGTTAGTTAGTT
AGTTCGTTCGTTCGTTCGTTAGTTACCAACTTTTNNNNNNNNNNNNNNNN
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AATGGAATAATTTGCCTGTTAATATTAAGTCTCTCCATCTTTACTTTTAC
GCGTACCCGTGTCCCATTTTGCCTGAGTATATATTTCTATTTTTCATAAG
TCTTATTTTTTTCCCTAATTGACTTATGTGGTTATTTTTTACTGTAATCG
CCAGATAGGTCTAATCAGCATTCCAGCTTTTGTTGAATGGTCAAGTTTTA
GCTAGTTTTTCTTTACAGGATGTCTTTGGAGATATGTCCGGGCAAGCATG
TCATTATCAGGTTATCTACCACCCATTTGCGATCCAGAAGATGGCCATTT
ATTGCTAGATGGTGGATATGTCAACAATTTACCAGGTCATTATTTTAACT
TTAAGTGACACCATTTTACAGTTGATAATGTGAAAAGCGATTCTCGTACA
TAGGGTCTATTTTCTCGTAATGGGAATGGGAATGTGCTTTTTAGACTGTT
TATATATATTTTTTGCCACTTAGTTTTTGCGCAAAATGAATAACTCTTGG
CTCAAACATGGCTCGATGGAGTAATCATAGACGACTTTTTTAAGTTAAAC
TTTTATTTCAGCTGACATCATGTTATCGATGGGAGCGAAAACCATAATTG
CGGTTGATGTTGGGTCACGTGATGAAACTGATCTGACCAATTACGGAGAT
TCTTTAAGTGGCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTC
ACACGTTCGAGTAAGTTAAATTTATCTTTGACTGAGGTTTTTATGTTGGA
TCGTTTTACCAAATATTACCCCCAACACACCTCCTTTACACCTGGCCCGG
TCAGATCAGCCCCGGTGAGTAGCCCAGTGAAGGAAATACCCAAAAACAGG
CCAAATTTTGGCAACCCCGGTCAAAAAATAACTAAAAATTTAAACCCGCT
CAAAAAAGGAAATGCTTATTGCCCTGCCCCGAAAAGTTGAAAATTTGAAC
CAAGATGTTTATTGGAGTTATTTTTTTATCAACCTATTTCAAGGCTTCCA
GTGACTCCACATTCTAAATTCAATGTCAATCTGATTAGAAGTTCAAGATT
TATGGCTTGTTTTCTGTTTTATTAGTTCATGGGAAATTAAGACAGTTTTG
CCGGTTGCAAATGCCCATAATTATATGAAAATGTTGAAATCAACAAACTG
AAAATGTATTTTTCCAAGAAATAATATGAAAAACAAAAGTAAATATCTTT
ACTAGCGCCTCTTAATGGCGATTTAGGCTATTTAAGCTGTATCATTATAT
CAACAGTTTTCAGTGATATTGCATGAAACCGAATCAATCAAAAGATTAGT
ACATTGAATCTGCAAAAAATATTCTTATTGATGTAATCTTAAATTTTTTC
CTAAGGGTGGATTAGAAGATCTTAAAATTCCAACACAAATCCCCAATCAT
TTGTCAGTTTCATTTCTTTTTCACTTTATTAGTTTTCTTCTTATTTCTTT
AGAAGCATCTTTTAAACTTTCCTATACACTTTGAACATTAAATAAAAAGG
AGTCTGCTAAATTGCGTGGGATGCGTGGGTGCGTGGGTCAATATTTTTGC
GTGGGTCATTGTTTTGCCTGGGTGCGTGGGTCAAAATTTTTTTTACGTGG
CTCAAAAATTTTGCGTGGGTCAAATGTTTTGCGTGGGTCATATTTTTGGT
GTGGGTCATTATTTTTTGCGTGGGTCATTATTTTTTGCGTGGGTCATTAT
TTTTTGCGTGGGTCAAAGTTTTTGCGTGGGTCACTATTTTTTGGTGATTT
TTTAGCAAACTTGAATTTTTTTACCAAATTAAAACTTTCGAGTTAGCTAA
CTCGTTTTTTTTTGTCAAATTAAAATTTTCAAGTTATCTTATACAAAAAT
GTGTTGTGTATCTACGAAAACTAAACAAAAGCACACTGTTTTTATGTAAC
GCGTTGTGGTTTATTTTGCATATCTGCACTTATTTACTATAATGGTATAA
TATTATACAGAATCAACACACACCACATACTTCAGGCAGCTTCAGGATCA
CACTTTTGAATTTTAGCATGCTATATTTCAGGATTCCAGTGTCATGGAAA
TAAACCCTATAACTTTAAGCAAAAAAAATGAGATATGACTGTTCATTGCT
TCTTTCCTTTCTATTGAATTTTTTCCTCCCTTTTTCTCTTGCTTTGAAAA
AAGGTACAGCGTCTTTATTTCGTCCAATTTTTTAAATTGGCCTTCTTTAT
GTACTTAAATCAAAGAAATCACAGGTGGGGTGGACGAAATAATTGACAAC
GATTAAATTGTTTAGTAATCGGTCGCCTAATGAATATAACTTTTGTGGAA
AAATTTTCAGATTTTGTCGCCATTTGAACACTCAAAGGAAACCCAAAAGA
TTAAAGCGCGCTATAAGAAGCTATAAAAGCTGACATGTTCAGTCAGTGGA
ATTAAAAAATATAAAGCCGCTTGATTGTGTACATTTTTTTGGCCATTCTT
AGGTATATACAAAACTTATTAATTTTGGACGAAATCTCCCAAAAGGGAAA
ATTCCACTTATAAAAAGACACTCCCCGCCCTGTTGGAAACAGTCTTTCCA
ACCTCGTTTATTGGAACAAATTCACCATATTCAGAAAGTACGGAACTGTA
CAGCTATGTAAAATAAACAAAATAAACCAAAACGTGTTATGTAAAATACA
TTCAACATTTTGGATGTGACCAGTTCGAATTTCAAGGTAAGGCATTTTTT
CGAATTACAGAGAGAATTTTGATCACGCAAAAGTTTTGACCCACGCAAAA
AAATAATGACCCACGCAAAAAATTAGACCCACGCAAAAAATATGACCCAC
GCAAAAAAATTGACCCACGCAAAAAATTTGACCCACGCACCCACGCAAAA
AAATGACCCATGCAAAAATATTGACCCACGCACCCACGCAACCACGCAAC
CCACGCAATTTAGCAGACTCAATAAAAAGAAAGCTAATAAAGTGAAAAAG
AAATAGAAGTGACAAATAATTATGAATTTGTGTCAAAAAAACTTTGAATT
TTCTTTTTAACCTAAAGTGCTTTCCATCATAACCCTAGGAACAAATTCAA
GATTTACTTCAATAGAAATATTTTTACAGATTCAACGCAGTTATTCTTTT
TGATTTTGGGTTACATGCAATTTAACTGAAAACTGATGAAAAATTGAATC
ATACCAGGCATACAGCTTGACCACCAAATCACCAAAAAGCGCTAGGAAAG
GTATTTTCTTTTGTTTTTTTCCGTGCTAAAAGGGGTATGTTTTTCCTCTA
TCATTTTCTCGGAAAAAGCATAATTATTTTGTTAATTTCCACTTTTTATT
TCATTTGATATACTGATGGCGAAATTAAAAGTATACACGAGATTTAAAGA
CGCCGTCGGGCACTTTTCTAAGTTTCAGGGGCCGCGGCATTTTTCAAAGC
AACAAAACTTACTAATCATCAAGCCAAATTCGGCTTAATAACCTTGAAAC
AGACCTGTTTTAGGCGATCTAGAAGGGCTAAAATTAAAAAGTTTTTGCCC
GTTGTCACCAACCATAGTGGCGCCTCCGCAAATTTTTTTTCCGTAGACAG
GCGGAAATATCTTTAATGGTCGGAAATATCATAGCGTAATGGTCGGAAAT
ATCATTTGATGGTCGGAAATATCTTTTGATGGTCGGAAATATCCAAAACT
CTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGGCGCCTCCT
TAGTCAGTACATCATGACCCTATCACTTTCAAAGTGAACGCGTCCTGTGT
TGGGAATCAAATTTAAAGTATAAATTGGTTCAGTACAAAGATTTTATTAT
GGGAAGAATTTTTTTGCGTATTCACAATCTTATGAGGCTAAACAATACCA
TAAAAAACAACATTTTATAACAGTTTTGATCCCAGAATGACTGAATCTTA
AGCCAAATTGAGGTTTAGTAGTAAAAGCAGGGGGTATAAACCTGAAATGC
CTCAACATCACCATCAGCCTCTAGAACAGCTTTTGAACTATTTGAGGCTT
GAAGTGCCATAAAAACAGCCGAGCGTCAACAAAAATTTACTGAATCTCAT
AACAAAATAGTGTACCCCGGTGAAAATTTTCCTCCAGGTAAAATATTTTC
TCGGGGTAAAATATTTTCACTTTTTATTTTGCCATGTTTTCCAAAGTTTA
ATTATCGCGTATTTCATTATTAAGATTCCAGACATGGCAGGGATTCAGAG
TCGTTTAGCGTACGTTTCATGCGTACGTCAACTGGAAGAAGTCAAACATG
CCGATTATGTCACCTACATTCGACCGCCTATCGACAGGTTGCTTGCATTT
CTTTCACTATTGAAATGAGAATCCATGATATTCTACAGCTTCACGATTTA
AATTTTCAAAATCGGTTTTAACTAATTTTGAAATCGAAATCAGTAAATAT
AAGATATAGCACATTCTAAGGATTGACCTTCTTTTAGAAAAGACTTAAAA
TACTACCTCCCAACTCTGGTTTAGTGTCTGTATGATGGCCACCAATGGAG
CATTTGTTGCAAAATCCTTTTGATTCTCTTTCAGGTTCAAAACGCTTCAA
TTTGGAAGTTTTGACGAAATTCTCGTAAGTTTTATTCACCTTTTGATTCC
GTGTAACAAATTCCAAAAAAGGAAAAAATTAAAAATCGGTTTAGACCTAG
CGCTCCGGTATGGTATTTTTTACGGATAGGAAGTGTTCATACAGATTTTA
AATACTGATGTTTCGGAGCAACGAAACGGAGCAGTTCCGTTACAATGAAA
ATAGTGGACCGAAACCGTTTCGGTCTGTTTTGCTTTGTAACGGCTTCTAT
ACGGACGTTCCGATTTTTACGTTTACACAATGTTTCGGAACCGTTTCGTT
TCGGAGCGATACAAAACCTTAAGTCTGAACATGGTCTTTGTCGAAATATG
TTGATCCTTTGAAACGTTGTTCGCTGCTTCGCTTTTCTTTTAACAGGAAG
TGGGATACACACATGGCCAAACAGTGTTCAACACCTATTTTACCGAAAGA
CTTTTTCCATCAACCAATAATGAAGAATCTCTCTCAAAGCAAAAACAACA
AATTACCATTGTACGTGTGTTACTTTCTCCTAAATCTATTAGCAAGCGTA
AAACCTTAGGTTCCTAAAGCAAAGTGAATTCATCATATAAAATTCTGTTG
CACATAGCAATTGATAACAGGAAAATTTTGAAGGTAATAAATTTTAATAG
ATTTTAAGAGAAACGATATTTCTTCATTCATTGGTGATTGCCGTGAAAGA
CAGTATGAAAGTATGTGTTTGAATATGAAAACGGAATACAAGCAGAAACT
TTTGCTATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATGCCTTTA
AAAATTCTTGGAAGTGTCATTCACGAAAGTTTATGCTCGCGAAAAATTCT
TGACATAGAAAATCTGTAAAATTTAAAACTTTGAATAAAATGTAACATTT
GTTTCACTTTTTAGCCTGTTAAAAGATTAATAAGTCAAAAGACAATCGAA
GAAGTATTTATCCCTCTAATCGCACGATGAACTATTTTTTTCCTATTTGG
CGCTCCTTCAAAGAGAGCAATTAATCGTTAATTGCATCCTTTAGAGAGCA
ATTAATTGTTAATCACTTCAATGCGGCGCTAGTCTAGCAAGCTAGACGAC
TAATTTATACATAGTAGAAATAAAGCAAAAAGTAATGAATGGAATAATTT
TAGTCGTCTAGAAACCTTTGTGCACTTACTCCAAACAAAAGAAAAGTGTC
AATATTGCAATTATAATTTTTTCCTGTTCAAAATANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTATCTATAAGGCTG
GAACACCGGATTCTTCCAGTCGTTTATACAAACTAAATCCCGTATTATTA
TTATTAGTATTGATATTATTAGTATTACACGCACTATAAACGACTCCAGT
CTAATGCGGCGCCAATTTTACAATATTGATTTTAATGTTTTTTTTATAGT
TTTTTTTCATCGAACGTTTTAATTGCATTCGAAATTAGTTTTGTGAAAAA
GAAAAACATTTAAAGAGAAGAGAAAAATATAAAACTTTCAGTGTAATTTA
CTTTCCTGACGGGAAAAAGTAGTGAAACAAATTGTGCGATTAGCTCGTAA
TCACATAATAACTCGTACAATTCGAAAATTGCACTCGTGATTTTTTTGTT
TCTAATTTTCCTCGTCCTTTCCGACCGAAAATTATTAACAAAAAATCACT
CGTGCAATTATTCTCGAATTGCACTCGTTATCATGTGATTACATATATAC
TAAGCCATTTTTTCATGTGAAAATTTTAATTTCTACGTCTTGATTCGCGA
AAGTTTATGCTCGCGAAAGTTTATGCTCGCGAAAAAGCTTTTTCCGTCAA
ATTCGCGAAATTAAATGTCGTAAATTTTGTGATTTTTCGACCTCGTGAAA
GTTTCTGCCCACGAAAGTTTGTACACCTAAAGTAGTTCTCTTGTTAAAAA
AGGTAAAAGTGCGTTATGAATGCATTGGAGGGTACATTCCATACCGAGTA
TACATTGCGTTTATCTCCTTCCTTTATCTGCCTATGGTTCTCCTTGAAGG
ATTTTCTGTAGAGAAGTGTTTTTGTGGCTGCTATTCGGTTGAAGGAGTGT
ATATTTTGCACGCATATTCTGGTGTCAAACAAATGGAATTATAAACCCTT
AAATATTTATGTTGTTTAAATACTAGGATCGTAAAACAGCGCCATCGTTT
ACCGACCTGACGCAACTAGTGGCTGTTGTAAAGACACCCAACGTGCCGCA
ATCGGTGTTGGAAAAGCGCGCGCAATTATTCGAGTACAGATCGGCAGACG
AGGAGAGCGATCACAACGATGACCAGGTAGATTACTACGCACGACAACGA
GGTGGTTCGCTCACCGAACAGGACATGGGTCGGGAGAATGAAAGTCAAGA
TGAAGGTGGTTATGAGGTAAGGATGGTGGGGTAATTTTCTCCATAGGATT
ATGTGATTTTTGAAGAATGATTATGATTTTGTTACCTACTTTCAACTTGT
CGGCTCTTTTCACGCCTGACCTTATTAGTGCTGTTTTCGGGCCAATGGTG
GATTAAGAGCCAGTGAAAGAAGGACCTAGTTTTTGTCGGCGTAAAAGGAT
ATTGTGTGCTTTAGCGCCGATAATCTAGAACTTTAACAGGATAAGGACGC
AAATGAGAAAGGGGCTGACAAAAAGGTCAATAATCAATGTACTTAGGCAT
CTCGACTAAAAATTGGTAATTTGAAAAGTGTCCTTCTTCCACTAGTTTGT
TTATTCCCTCTTTTACAGTCAGAAGATACCACCAAGGTGCGGCATTCATA
CCATCGACAATTCAGTGCCACGTAAACTCCATGTATAACCGATAGCTTTT
GAATTCTTGAAAGAGAAGTCGTGCACGAAAAAAAAAGAAAACTTTACTAA
CGTGGTAACGGCAACCTGGAGAAGGTATACGTGTTCATTGTTTGATCATA
AACGTTTTTGAAAGCAGGATGCCTTCATTTTGATTATGAATTGCACATTT
ATTACTTCATCTTACATGGAAACAGATCTCTTGATGATGACGAGCTCAAC
ATAAGTTAGATTTTGATGGTGAGTCTATAGCTTTATAATGAATCTTGTAC
GAAAACAATTTTATANTTTGATGGTGCAGTATATAGCTTTATAATGAATC
TTGTACGAAAACAGTTTTATAGCGAAAATTCAAAATTATCAATTTAATTT
AATTTAATTTCAAAATTTCCCATTAGGAGGATAACATTTTTTGTGTGCAC
GCACAATAATAAGCAAATATTCAAGTATTTTCGATATCCGATTATTTCAG
GTTGAATATGTTTTATCGTTCCCTCTTTAGCAAAATATGCATGTTCCTCC
TTTCCACTTTCAAAAAACTTCGATGTCATATTCGAACGTTTCACTTTCTC
AACTAAACATGTCGATTTCATTTCATTGTTTTCTCTTTAATTACCAGAAC
ATTCGAATTCATTTCTCTTTGATATTTTATCCTTTTTCGTTAATTTAAAA
AGAGAAAACTTCGATCATTTATTTGGCTTTTGTTTTTTTATTGAGAAGAA
AACTTCTTTTGTATTCACAAAAGGGATATTCACTGTCGGTTATCTAAAAA
AATATCCGACAGTGTCTTTTGCTAAGAGGTTGACGATAATTTAATTCATG
CATCGGTTCGAAGATAAACAAAGAGTAGACATAAACAAGTTGTATTGACT
TGAGAAAATATCACAATGTTTAGAGTTATCTAACCGCTGGCCTTTCAACG
ACTTGGTGTTATTTCAATTTTACAATCAGGGTGGTTTCACACTGTTGCTT
GAAACTTTTGGTAACAAAGTAGTGCACGATCCTATCTTTTGTTTTCTATT
ATATAAAATTGGCACGATCGCTTGAAAATTTCAAGCAAACTTCAAGCAAA
AACGATTAAGCTAATGAGTAATTCATTTCGCTTTGTAAACTCAAGTTTAT
TTGCGAGAACCAACATTTATAAGGATAGGTTTGTTTCTTATGCGTGATTA
TATAAAAAAAACTGTTAA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00063530	TCONS_00063530	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00063530-protein	TCONS_00063530-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_392	supercontig	scaffold_392:63481..75848 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.31	5.65	4.49	3.95	15.12	11.23	14.85	15.12	9.47	11.14	12.03	9.13	8.98	10.07	7.46	11.48	10.47	10.28	6.72	10.35	11.15	10.9	8.98	11.01	20.89	21.53	14.25	11.95	12.59	10.63

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XLOC_039825 (gene) - C. hemisphaerica