XLOC_039864 (gene) - C. hemisphaerica

Overview
NameXLOC_039864
Unique NameXLOC_039864
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_394:156372..159752-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039864 ID=XLOC_039864|Name=XLOC_039864|organism=Clytia hemisphaerica|type=gene|length=3381bp|location=Sequence derived from alignment at scaffold_394:156372..159752- (Clytia hemisphaerica)
TGTTCAAATGGACTAACGTACTAAGATTAAATTTGAAGCCTGGTATATAA
ATATAAAAGCGTGACGGAACAAGTGAAGGCATTTGAGATGATGCAAGGGG
GTTGAAAAGAGCATAAAAAGAGATGTGTAAAGAGGTTCTTGACAATTATT
GAGAAACTCTAAGGAAGAATTGCATTTTTGACTTTAGTCGAGGTATGTCT
ATTGTGTTGTTGCTTCTTGTGGTATAGCATGGTTTTAGTAGCAGGACAAT
TAAGCTCACTGGGTTGTTGTTTAGATTTCAAATATCCATCTTGTAATATG
TGAAGAAAAGTAAATCAATCAAAGTTTGATCGAATGCTTTAAAGACGGCC
TTATTAGGGTAAGGGGAATGAAAATGGTCTTTTATATTTAACAGATTCGT
ATTTTTCAAGGAATTGAATGAATAAGTTATAGTGTTCAGCATTTTTCATA
CTTTACTTTTGGCATTGTGATGAGGAAGAAGTGAAATTCCATCAAAATTT
TCTGAAGATGATGTCAATATACGAAAAAGAAGAAGAAGGGTTTTTCAATA
AATGACTTCTTGAAGTCATCATTGATGAGATTGTAAGAAACATTAAGGAT
GTCATAAAACTTGAACTGTTTGCACGAATTATTACATAGCGTGGTAGTTG
TCGTTAGTGAACTCCTAGGTAGAAAATTAAACGAAAAACAAAGGAACCAG
TGCCCTAGGAATTTAAAAAGTAACAAATTTTGATTGGATGACGAACTCAC
TATTTTTGTTGTTAGAAACGATGGGAAAATGCCTTCCACAAGGTCAAGTA
CTTATCAATCATGTGATACAACAACTGATTTTTAACACAGGCAGATAAAA
ATTACAAATCAAAACAACAGTGTAACTCTTAGAAACATGTCCTGTTTGAA
AAAAGGTTAAGTGCTTGTCTACTAAGTTGGACTATAAAGTATTCTGAGAG
TTAGGGCAATTTTGGTAATACTGTATTTTATCATGTATTGTTAACCGGTT
ACTTTTCCAAAGCGGGCTACATGGCTTTTTGAGCAATGCAATTGGGTTGA
CTGTTTTTTTTTCGGGCTGTACTGTGAAATATTGCCCTCGGTCAACACAA
CGGCCTCGCAAGCTCAGTGGTTACTTGACCTCGTCAATATTTCTCAGTAC
AGCCCTCACTAACCTGTCATTATTGTATTAAAAGAAAAAGTTTTTCTTTA
TACCATTATAAAATAAGCGATAAGACAGACGAAAATCTTTTCACTTGGCC
CCAGTCTGATGATTTTAACCGGTGCTCTAAATCCTAAATCTCGGTGGCGG
TGTAGCTTAGTGTGCTTGAGGAGCATGTTCTGAAAGCGCAACTGAGAAAA
AAATCAAAATAAGAGAGGCATTTCAATGTAATTAATTGTCAAAAGTTGTC
GTAATTAAAAATGATTAACAATGCATTTATGTAATTTGAGTAGGATTTTG
TAAGGACGTCAAGAAGACATTCTTCATAGAACGGTAATCAGATATTACTA
TAAAGGAATGCGCTTGATTGTCACAAATAATCATTTTGTGTTTGTAAGTC
GGAGAGGCATCATCTTGAGGGTGGTGAAGCATTTTGAGATTTTTTTCAAA
TATGTTTTGAGAAACGTCTTCAAAGACTTTTCTATGAGTTTGGTTATTTT
AAAAGCGGTTTTTGGTTTGGTTTGTAGAAATTTCTGAGATTCCTATGTTT
TTTTTTTGTTACTTATTATTTTCAAGTACATAACCACCCTCGGTATTATT
TCGGAGTTTTATAATTTTTCTATTCTCTATATTTTCAGACACAAATAAAA
TACAAAGAAAAATTTAAAGAATCAAAATGACTTACAGCTGTGGAGAACTG
ATTGATGATGATGTCGAAACATTGGAATATTGTCCGCGATCATTCATTGA
AGAAAATCCGGACGAAATGAATAAACCCGAAAAGATCACACCAAAACGAG
GCTCCTTTACTGAATTACGTAATACCATTCTAACTAAAGTTTCAACACCG
CGCGGTAATCGGCGTTCAAAAACACTGATTCAAAGATGTGAAAGTGCGGG
TAAAGGATTGAAAGATAAACTAGGCCGAACATCTAGTGTAGATGTGTTGG
GAAACCCGCTTCGTAAACCACAACAAAAACATCACAAGAGCTTGGAAGAA
GACTTCATGTTTACTGGATTCAGTCAATTAGCTGATAAAACCCTAGTTAC
ACGATCAAAAGTAGCAGAAGTGCGACGAACCAGCGCTGATAACGCAACAT
ATGAAGAGGAGAAAAGACGAGAACTTTTAAATCGAATGAAAGATCGATCA
ATGAGTTGTCCGTCTTACCCAACAATCAAAGAGGAAGAAATCAAAGTCGT
CAAATCATCAAGTTACGATAGCAGTAACTATAAACAAACAGACTCTGATA
AACTAAACATCGAGTACCCGACTATTAAAATCGAACTTTGCAAAAATGAA
AGTTTGGGTCCAAAAAGTGCACCACTTCAACGTAAAAATTCTAAATGGAG
TGACAAAAGCGCTAGTATGTCTAGCCTGAGTTCAACAAAAACAAACGGGA
GTAATGGATACCTTTCTAGTGACAATTCATCTGTTTTTAACAGTGAAACT
TCTATAAATGGAGGACGGGACGAAATGCCCATGCACCGAAGACCGGTCAG
TTTTATTGATATCTTCAAAAGAGACAATATTGATGAATTTTCAGCCCCAT
CACATAACCATACATACACTTTACCGCGAGGCTTACCACGAAACACCACA
GACTGCAATTGTAATACTTTACAGAAAAATGGGGAGCTGTCCAGCAGCGA
AACAGACTTGGATCACGCGCGCACCGTACGCGGTCGCGCATCCAGTATGA
TTGAAATCGGGGCGAATAAGAATACCTCGATGTCACAACCCAAAACACAA
CGTCGACATGAACAATTGAAAAAGACAACCAGTAATATTTATGGTCTCGC
TTCACCAGCTGCTCTTAAGAAACTGTTTAAAAAGAAAAGGCGTTCGATGC
CCTCAGACACCCGTAAAGCGCCCGCAACGCCTGTGTTGGCTGAGGGCCAA
AGGCGGTGCATTCATATAGAGTCATTTGTATAAAAAGAAGCATGAATTCT
AATGACCCTTGGAATCTCGTGAATAACTTGAAATGACAAGATAGTTAGGT
TTTGACTCGAATGTATGTCTGCAATAACTTTTGTATAGATTTCTTTGTAT
TCGACATTTTATATATCATGGATTATTTTTTATAATTTTAAATATTTTTG
TACATATAAATATCATGGAAAATTTATTATGGAAATTTTAAATCTTAAAA
ACGAAATTTATGTATCAGTAAACGAATGGAATAACATTTATAAGATATGA
CTATTGGTCTTACTAAAGATCACAAAGAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063604TCONS_00063604Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063604-proteinTCONS_00063604-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_394supercontigscaffold_394:156372..159752 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0.07	0.13	0.04	0.5	0.37	5.88	6.91	3.5	9.48	13.35	5.8	13.82	13.26	27.54	20.06	12.29	11.58	2.69	2.05	4.51	4.54	7.25	5.12	11.67	8.23	61.71	33.36	52.67	33.63