XLOC_039977 (gene) - C. hemisphaerica

Overview
NameXLOC_039977
Unique NameXLOC_039977
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_40:53967..60630-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039977 ID=XLOC_039977|Name=XLOC_039977|organism=Clytia hemisphaerica|type=gene|length=6664bp|location=Sequence derived from alignment at scaffold_40:53967..60630- (Clytia hemisphaerica)
ATTTTATAAAAGCAAGAAGGGCAAGTAAAAGGGTCAGTGTCCAGGTCTTT AATAACTTAAACACAATTTCCCTACTAAAAACGTTGTTAATGATAATGTA CAGTATGTAAGTTTTCTCAAAACATATTTTTTAATTTTTGACAACATTAA AGTTTGAAAAGAGCAATTTTATTTTTATTTTTTTTCCATCCTCCGGTCCA AAAGTTCATCTCCAAATGTCCGTAAACCAGAAAATAAAAAAGTAATTGCC TTAGGATTAAATAAACATTTTAAACTCAGGGAACTTTTATTAGAATGCAA TATTATATAGCTATTTACAAGAACAAAGGAAATTTTTGGTTTTTGCTCAA TTTTGCATGATGAGTGACGTCATCAAAAATTTTTTTGTCAAAATTTAGCT GTTACCTTACATGACAAAGATCTTGTGTGCCAAATTTCAACCAAAAAGAC CAACTAGATCAAAAGTTAAGGGGTTATACAGGAAGCACTCCCCCTAGTTC TGAACTGCCCCTAAAAGCCTATAGTTTGAATAGGGTTAAACTTAATCAAA AGAGTAATGAATGCAGAGCTTTTGGTATTGAAATTAGCTATTATAATCTT TTAAAACATTTGATTCATAGAAAAAGCATTCCAGAGTGAAAATCCTCGAT TCAGATGAAGAAGAAGAGCCGGAAGATGCGCATGATCAAATTGCTCAAGA TATCTTTGCTGATGAAGATGATGACGACGATGTCCGTTCAACACGGTCTG CGCGGCCTGCTTCACGACAATCAGAAAAATACACAGCTATCACAGATATT GGTGATGAATCCGAAGAGGAAGAAGAAGGCGTTGATGATTTTATTGTTGA TGATTTTATCGTGGATGATCATAACCAACCCATCAAAACAAAGAAGCCAA GGAAAAGGAGTCAGTATACTGACAGGTAAGTTTAAAGGCTTTAGATTCTC TCATTCATTTGATCAGCATAAGAAAATGGTCTTCTTTGTCCTTTCATGAA AAATGTCACATAATATAAAATTAATATGAATACAACCATTATGTGCTTCC CTTGAGGGTGCTTGTTCGGGAAAAATCATAATCTTTTTTCTGTTCCCCTA AGGGCTGGCTTTTTAAAAATTAGGGACACGAGTCTGTTAATAAACGTCCG GAAATTCCCAATTTTCTAGCTCTTGTTGTAATGGCAGATTTCTGTAAAAC CTGAATGGCTAGATGTTGTGCTTTAGCTGAAAAGTGTGCTGATTCTCAGT GGGAATTGTCCTACCTAGGTTGCGTGACATTACAATAGAAATTCAAGGCT TAACCAATCAGAAGCTTTGGGATTTTCAAAAACAATAGTAACTATATTTC TTGCGCTATTCAATTATTTTTTGCTTGGAAAAGCTTAAAGCCCAACATCT AGCCCTTTGAGCTTTATTAATCAGTGGTTGTAATTATGTAATTAGTGTAA TTATGTACTTTAAACACTAATAAATGATATGTTACTTTTACTGGTACCCA TATTGTTTATTTCTTTTAGTGCTTTGCAAGAAGCTCAAGATATCTTTGGT CTTGAGTTTGATTTGAGTGAATTCGATGCAGATGGTGGTTTTGATGACAT GACAGAGGAGGATGATGAGGATCTCACTCCTGAAGAAATCGCTGCAAAGA AAGCAAAACAAGCCAAGAAGAAAGGCTCAAGGAAGTCAATTTATCAGGTA GGAAGGTTTACTGACGTTACTTTTTCGTTGGAATCACAAAGAATTGTAGT AAATTGCAATAACAAGTCACTTAAGAATATCAGTCATTAGTAGAAAAAGT AATTTTTAACAAAATTAACACTGTGTTCAAAGTTCCACCGTCTCGGTGTG TAAAGATACTCTTCTGCCTCAAAACACAGTAAAATTCTGCAAAATTTTGA AAAACCGGCTAATTTGTTGTGTAAATTTCAAGTTCCCTTTGACACAAAAA AATTTGACCACTGTTAATAGAATTACGGAAAAATCTGTTGCATTCATTTT TTCAAAAAAAATATGCGGCTGTCATAACTGCAGTGCAAGCATTTAACATG ACATGTTCACTTCACACATTGTTTTTTTTATAGGTTTATAAATGTGATGT TGGTATTGCAGGGTATTGAGGCGTTACTCTTTTTTTAGAGAGTCTTTGCC AATTGTGGATTCATTTTGATATTTTTTTTATAGGTTTATGAACCATCTGA ATTAGAAAAGGGTCATTTGACTATGGAAGATAGTAAGATCCGTATGGCAG ATGTCCCTGAAAGATTCCAACTTCGACCTGTTCCAGTCAAGCCAGCCGTT GATTCTGAACTCGATGAAGAGGCAGAATGGATTTACAAACAGGCTTTCAT GATACCGCCAATCTCTCAACAAAATTTCCAGGTATTTTTCATATGTGAAA ATGCATTTTTTGGTCACCCCATCTAACCCTGGCATATTTAAATTTCCTCT GTCAAGTTAAAATTATTACATGTCTTTATAAAAGGAAAAATATCTTTTTG AATAATGATAATTTCAAAAATATGGCTCATTATAGGCATAAAAAATGCTA AATTATGTTTTCTTGCCCAGTTAACCCTTTATTTCTGATTAAGAACCAAT TATTTCTACTGGTTGTTTTTTCTTTAGGATCCAGTCGACACCAATAAAGT TCATAATGGTTTTGAAGCTAAACAAGTGACAGCTATTCCGAGGATTCGCG CTGCACTCAGTTTCATGAAGAAAGATATGTTTGAGGTTTGTAAGGGTTCC ATTGTAAAATTTTTCTTGTACTTTATAGTTTGCTTAATATGTAATCGGGG GATACAAGCGGGCACTTTGGAAGGGGTTTAGCTTGCCATGATAAATTTCC GAGCAGATCCTAATAGACGATATCGCGTTTAGATAAATGCAATGCATTCT GGTTTCTCGGGGACCCTCAAGGGAATTATAATCTATTCCAGATCATTATA TAATCGACATTATAATTCCTTTGAGAGTCCCCGAGAAACCAGAATGCATT GCATTTATCTAAACGCGATATCGTCTATTACGGTACGTACTTACTCTCGG CTGAGGTGAAACAATCCCACCAAAAAATAATTCAAAAATCGATCATAAAC ATAAACATAAACTTTGGAAACCAGTTGCGGACTTCAATATTTTGGCTGAT GAACATTTTCAGATCTTCATATTCCAAGCATGTCTTTAGAGCAGAGCACA CTCCACACAGACAGACATGATCTCAATGAAATTCGGCCATTATTAACGAC TTATTTCAAATTTTAATGATAGCTTTGAAGAATGTTTTTTTTGAAAGTTT CTTTACTTTAAGTTAGGTCCCCCCCCCCCAATTAAATTGGTTTAAAAATT TCAAGAGTTTGTAATGACAAAGACATCATTTGTATCGTGGTAAAGAGGTT TGGCCATAGTATGAATGTTTTTAGACTAATAAGAATCTCTTACTCAATTC TAGGTTCCATTCATTGCGACATACCGTAAAGAATACATCGAACCCGAATT GAAACGAGATGATTTGTGGAAAGTATATGAATGGGATGAAAAAGTAACTT TTATACTTACTTACATCACAATCGTGAAAGCCATTNATATGAATGGGACG AAAAAGTAACTTTTATACTTACTTACATCACAATCGTGAAAGCCATTGGA AAGCTTCAGTTTGTAACATAGAAAACATTTACGTTCTTTAAAGACTGATA GCACAATATTTGTGTTAATAATCACGGATTTTGAGGGGAAGAATATGGGA TATTTTCATCGGCTCAATGAAACTTTTATGGAGTGGGATAGGTAAAGAAA TCGGGGTATATTCAGTCAGCACGTTGCTCTATAGTCTTAAGTTATTCCGT CTCAACGAAGTATATAACCCTATGGGCACACAACGTCTTATGGACATTCA ATGGACGGCTTTAAGACCTTTGGACGTCCTAGAAACGTACATTAGACGTC CAAAAGACGCTAGTGCCCATTGGGAAAGAGGCTTTTCCGTCTCAAAATAA TGCATAATTCACCAAAAGTTTTTAGAATACGTTCATATATGAAAATTTGC TGTGAAATGACAATTTTCCGTCTAAAACTTAAAAACCTTGCCCTGACCAC TATTTCATTCCAGTACACGCAATTTACGATGCGTCGTGAGAACATGCGTA AGATGTTTCAAGAGATGCAGAAATACCAATTCGAACTGGCCCGAAACGAC GNGTTTTGAAGCTAAACAAGTGACAGCTATTCCGAGGATTCGCGCTGCAC TCAGTTTCATGAAGAAAGATATGTTTGAGGTTTGTAAGGGTTCTCATTGT AAAATTTTTCTTGTACTTTATAGTTTGCTTAATATGTAATTGGGGGATAC AAGCGGGCACTTTGGAAGGGGCTTAGTTCGCCATGATAAATTTACGAGCA GATCCTAATTACGGTACGTACTTACTCTCGGCTGAGGTGAAACAATCTCA CCAAAAAATAATTCAAAATCGATCATAAACATAAACATAAACTTTGGAAA CAAGTTGCGGACTTCAATATTTTGGCGGATGAACATTTTCAGATCTTCAT ATTCCAAGCATGTCTTTAGAGCAGAGCACACTCCGCACTGACAGACATGA TCTTAATGAAATTCGGCCATTATTAACGACTTATTTCAAATTTTAATGAT AGCTTTGAAGAATGTTTTTAGTTGAAAGTTTCTTTACTTTAAGTTAGNAT TTCAAATTTTAATGATAGCTTTGAAGAATGTTTTTAGTTGAAAGTTTCTT TACTTTAAGTTAGCCCCCCCCCAATTAAATTGGTTTAAAAATTTCAAGAG TTTGTAATGACAAAGACATCATTTGTATCGTGGTAAAGAGGTTTGGCCAT AGTATGAATGTTTTTAGACTAATAAGAATCTCTTACTCAATTCTAGGTTC CATTCATTGCGACATACCGTAAAGAATACATCGAACCCGAATTGAAACGA GATGATTTGTGGAAAGTTTATGAATGGGATGAAAAAGTAACTTTTATACT TACTTACATCACAATCGTGAAAACCATTGGAAAGCCTCAGTTTTTAACAT AGAAAAACATTTACGTTCTTTAAAGACTGATAGCACAATATTTGTGTTAA TAATCACGGTTTTTGAGGGGAAGAATATGGGATATTTTCATCGGCTCAAT GAAACTTTTATGGAGTGGGATAGGTAAAGAAATCGGGGTATATTCAGTCA GCACGTTGTTCTATGGTCTTAAGTTATTCCGTCTCAACGAAGTATATAAC CCTATGGGCACACAACTNAAATTCGCTTAAATAGAGCTTTTTAAGCGTTT TCCCTATGGGCACACAACGTCTTATGGACATTCAATGGACGGCTTTAAGA CCTTTGGACGTCCTAGAAACGTACATTAGACGTCCAAAAGACGCTAGTGC CCATTGGGAAAGAGGCTTTTCCGTTTCAAAATAATGCATAATTCACAAAA GTTTTTAGAATACGTTCATATATGAAAATTTGCTGTGAAATGACAATTTT CCGTCTAAAACTTAAAAACCTTGCTCTGACCACTATTTTATCACTACAGT ACACGCAATTTACGATGCGTCGTGAGAACATGCGTAAGATGTTTCAAGAG ATGCAGAAATACCAATTCGAACTGGCCCGAAACGACGAAGAAGCTGCTTC AAAACCTGGCTTCAAAGTCATCGAGCAAGAAGACCTTGACAGGTATAATA TAATAGCAAGCATTGAAAAAAATTATCGGTCTATCATATAACACCCATAT TACACGGACTATAAACTCTGGCTACATTGCAACCCATTTTCTAAGCTACT GCACAGGAGCAAAGCATCCAGATCTATTCCATACTACACATGTGATTTTT TAACTTACTTTTATTTCTTATACGGTCTTTATACGTTTGCAAGATGATAA GACAACAAGATTTTCAGATTTTGCTTCAATACCATATGAATATGAATATC ATTTATCATAGGCGCTGTGGTATAGTGGTCATTGACCTGGGTTGCTGCAC AGGCGACTAAGGTTCGATTCCCACTCGCAGCGGTTCACTTGGCAAGTGAA TGAACCTTCGCCCGGGTCAATCCATGTCATGTGCAAGGTGCTGACGGGGC GCTCATTGGAAGCGTTTATAGTTGCGAAAATAGGCCTCAAAGCCTCCTGT AAAAATACAAATACACAAATCATGGTTTATTTCATTTGATGGATTTCCTT CTCTTGGAAGTCAACGAATACTATTCACATCAATTCCCTAATTCATTCGA AAACTATGATACACGGGTTCTTTCAAAAAGTCAACAAAGCTTCGAGAACT CTTTTGATCAAACTGAGATCAGAATTAATAATTTACTCGAAGTTTAACAA TGCAAAGAAACCGGTTATTTTTCTACATTATCAATCTATTTTTTATGATT TTTACAGACTTGACACAGCCGCCAACCTACAAGAATTGATGGACATTTAC GTTCATTTCCAAGTGTACCATGGCAATGAAATGGTAGACATGAAAGAATG GAAAGCCAAAAATAAACCGGCACCCGAGAAGAAGATGAAAAAGAAGACTA TCCGTATCAAGAAACCGAAAACGAAGAAAGCCAAGGAACTGGAAATCGAT CCGGAAACGGGCGAACCGGTCGAAAAAGAGGAAGGAGAAGAACCGGAACA AGAAGATGATGATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063763TCONS_00063763Clytia hemisphaericatranscript
TCONS_00063762TCONS_00063762Clytia hemisphaericatranscript
TCONS_00063761TCONS_00063761Clytia hemisphaericatranscript
TCONS_00063760TCONS_00063760Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063762-proteinTCONS_00063762-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_40supercontigscaffold_40:53967..60630 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.12 20.02 28.03 23.16 86.73 67.44 46.49 51.8 26.7 36.65 30.88 23.11 30.51 36.51 22.28 30.62 29.66 29.05 14.44 18.91 25.46 24.6 27.37 30.59 50.37 48.87 20.14 16.61 31.17 35.39