XLOC_040068 (gene) - C. hemisphaerica

Overview
NameXLOC_040068
Unique NameXLOC_040068
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_404:171933..177442-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040068 ID=XLOC_040068|Name=XLOC_040068|organism=Clytia hemisphaerica|type=gene|length=5510bp|location=Sequence derived from alignment at scaffold_404:171933..177442- (Clytia hemisphaerica)
AACAGGACCAGACGGTAGATTGTTCAAGCAAACTGAAAAATAATCACATA TTATATTCAATTAAGACAAAGGTTAATTAAGGGAAAATTAAATAATAATA AAGGTTACATTCTGTTTTACCATAAAATATATTCAATTAAGATTAAAATA CCATACCTCTTGAACATTGATAAAAGGCATATCCTTGGTGCCAGGGTTTG ACATATTTAACTACTTTTTTTTTGGACTGAAATTTGAATGAAAGATAAAT AATGAACAAACGCGAGAAGAAAAAAATAACGGTTCAGATCTCATTGTATT GACAAGGGACTATAAATTGAACAGAATGTAGTAATTGGGTTTGGGAGCAA GGCAAAAACAAGAAATTGTAAACAGAGCATCAAAGAACACAATATCTCAA CTGTGTTGTAGCATTGTAAGTTAAAATATAAACAAAAACAAACTGTAATA TAAACGTTTTTTGTAATAAGATTAAGGGCCAAAATTAAAAAAATTAACAT AAAACAAAGAAAATTATTCTTTTACAAGATATAAAGAGAGTTATTTACAT AAATTCTTTTATGAAAAAACAAAAACAGTCGAAAAGTGTACAAAAGAAAT TAATCTAAGAAATATTATCATATGTAGATTGGACAAATTATTAGAAGCAA TTGAACAAAGAAACTAGTCCAGAAATATCCGGCAATAACATCTTAAATTT CTAGCAATTAAAAAAAAACAATGAACAGTTTTAGCAAATTAGCCAATAGG AAGAAATGAATATCTCTCATATATGAGGTGAAAAAATTGAGAAATATTTC AGCTTAAAAGTATAACAGCTTTCGAATGTTTCTCGTCGAATGAAGTATGA TGATGCAAAATTATTAACAAAGATTTGTCAAGATGTGGAGATACTGTAAA TCGAAAACTACTGAGATTCTCGAAATATTCACCATCCAAAAAGTTCAACT TGAAAAATCCAAAGGCCATTACATATTATAACCTTGTGCACTTTTTTTAT ATAACAAATCTAAATTTTACTCCGAGCCTGGAGTTTCTTATTTTTCCAGA GAATTTCAGCCAGAAAGTTCCTTATCGAGTTCCTTATATAATTAGCTGTT AAAATTTCATTTGCTAAGTATGTAACTTATGAATAAGTATGATAATGGAC TAAAGTACAAAAAAAAAAACGTTTATTGAATGTTGTTTCGTAAATATTTT GTCATCTTTTTGTTTAGGCTTTTTTAATTGTGTGCAAGTTCAAGTTGAGA TATCTGTTCTTTAACTTGTTTTCTTATTTTCAGCTTGAGCAGTTCCTTAA CAATTCCTTATTTTTCAGACCATTTTCAGCCTCAAATTCCTTATAAACGT GTTCCTTGTAAAAAAAAACGTGTAGTGTACAGATGACTGATTGATAGAGC AAAAATTAGAAAAATGGAACAAATAAAACAAATATTTTAGAACATAAAAT AACAAAAGTTTGAATAAAAATGGAAAAGAAATAAAAATCTACAATTTATT TACATATTGTTATTAAATTAACTCCACGATACCTTAAGGAAAGACATTTT CAAATTGAACTTACTTTTGGAGTGAATTTTATCTGAATTTGGCAATTAAT TCCTTTGAGGTAATAGTCTCAATGAAAAGTCATAGTCACTTTAGAAGTAA ACCCTTGAGAAAGTAGAAAAAATCACACAAATAAACAAAACTTGCAAATA GGTGAGAGAATAATTCAGTTAAAAGCAAAATCAATTTTAAAAAGTGTAAA AAATCTAAGTTAATTCGTCTGCATTAATTACTTACAAAATACATTGCAGG AAGAAATTTTGGCGGGAATTTAATTTGGCGAATGGCCGAAAAAGTTTTTT CAGAGGGAATTTAGTTTGGCGGTTAACTAGAAAAATTAATTTTAGCGAGA ATTTGATTTGGCGGATGAAGGACATTTTTAGGACATTTTTACATAAATAG AGTAATTGACCAAATCCGCCAAATTTTCTACCCGCCAAAATTTCTTCCTT TAAGGTATTAATAAAGCACCAGTTAAAGAATGACAATAAATAAGGGAGCC AGATATGAGATTGAATTTTTAAAATAAAAACAAGTCCAAGGGGCTCAATC TTTGACGAAAAATGGATGATTCATTGTTACAAATTACCAAAAAGATTGAA AAAGTGTTTCACAAGACAAGACCCTAGAGAATAGAATCGAGTAGGTCTGA TCAAATAAAATCAATATTCATGAGCAAGAGGGTTGTTAATTAACTATCCT TAATTACCAAGTATGTATCTAAGGTAAATTTAATTGTAGTATCTAAACTA TTAAAATATAATTCCTTCTTAAAAATAACCACACTTTCTGAATAAAAAAA TTAGACCAACAAATATAATCTGCTTAAAAATATTGAGGAGAATTATACAA TTGACTGTATAACTCATTTCAAGGTTTTTGTCGGTGTTTTGTTTCCTGTT AGCTGTTTATCTCTAGTATCCCTTGCTCGATTCAGTGCATCGGTTGCTTT ACCGTCAATCAGAGTGTAATCACTTTTGTTAGGTTTTTCTATGGGAGATC TAGCTGAACCCCTGATAGGTGAAGTCGATACTGATTTTGAATAAGAAGTC ATTTTTCCAGTCAAAACTGCGTAGTCCATAGATGGCTTTGAAGAATTAAT TGACCCACCACTTTTAGTGGCATTAGCTGGTGACATTAAATTCAAGTAAT CACTATTATGGTTACTGCTTGGTGTGCTACTTTTGCCAGCCATGTTTTCA TATGAGCCACCTGGTCTGCGACTTATTATAGAAGATGCACTGCTACTTCC ATCTGCAGAATCCAACCCACCAAAGGGGTGATAAATATTCGAATCATCAT CATCATACTTTTCAAATTCATTCTTATAAGTTTTTGTTTGCTTATTACCT AAATTCAGAGGTGCTGGCTTATGTTTCCTTCTGTTCCTTAAATTNGTAGT ATCTAAACTATTAAAATATAATTCCTTCTTAAAAATAACCACACTTTCTG AATAAAAAAATTAGACCAACAAATATAATCTGCTTAAAAATATTGAGGAG AATTATACAATTGACTGTATAACTCATTTCAAGGTTTTTGTCGGTGTTTT GTTTCCTGTTAGCTGTTTATCTCTAGTATCCCTTGCTCGATTCAGTGCAT CGGTTGCTTTACCGTCAATCAGAGTGTAATCACTTTTGTTAGGTTTTTCT ATGGGAGATCTAGCTGAACCCCTGATAGGTGAAGTCGATACTGATTTTGA ATAAGAAGTCATTTTTCCAGTCAAAACTGCGTAGTCCATAGATGGCTTTG AAGAATTAATTGACCCACCACTTTTAGTGGCATTAGCTGGTGACATTAAA TTCAAGTAATCACTATTATGGTTACTGCTTGGTGTGCTACTTTTGCCAGC CATGTTTTCATATGAGCCACCTGGTCTGCGACTTATTATAGAAGATGCAC TGCTACTTCCATCTGCAGAATCCAACCCCCCAAAGGGGTGATAAATATTC GAATCATCATCATCATACTTTTCAAATTCATTCTTATAAGTTTTTGTTTG CTTATTACCTAAATTTAGAGGTGCTGGCTTATGTTTCCTTCTGTTCCTTA AATTGCCACCAATTTCAGGTTTCCCAGATTCTGACGTACTAACGTTTACA TAGGAACCATGGTGTGAATCCTGCTTTTGAATTGTATTGTTTTTAACATT AATATAATCTAGATTGTCTAGCGCATCGAAATTTTGTAGACTTTGAGCTT GTCCTTCTCCAGTGGCTTTCTTCCATTCATCATAACAAAGTGGATCTGAA GAATGTTTTGAAGTTCCTTTCCAACGTCTTGCATTGTGTGCATTAACAAT TTGTGATGAAGAACTGTCATCTGACGAGTCCTTTCTTATTTGACTGATAT TACCATATGCTGGTTCATCTGAATAATCAATATTACTATAATCAAAATGT AGTGGTGAAGGTTCAGAGCTGGCAAACGCATCATCGGATCCTTCTGAATG ATAAGTCCTCCTTTTAGTACTTGAATCTTGAGTCTTATTTACTTTGTCTT TGCCATCTGTGATATCATTATTGGGTTCCGTTGGTGGAAAATCAAACATG GTTTGTGGTGTTAGTCCGAGGCTAGCTGGTGATCTTGGTGGTGGTGTTGG AGTCTTTTTATTACCTTTCTTTTTAGCTATTACATAATGCGCTGGATTCG TTGGTTGCCTATTATAGTTATTGTTTGTGACACTGTCAGTACTTCTCCGA GGATTATTTTTACTTGACATTTCACTTTTGTCAGTTGGAGACATAGTCAT TCGAAATTTTTTAGCCTCTTCTGCTGTTAGAATATATTCTGGTTTGTCTT TCATTCTTGGTTCTAGACCTAACGGTATTTTCTCCTCAGATTTGGTTGTT TGGTCTTTAGATGTTGATGCAAGTTCCTTAGGTACAGGAATATCACCTAT CGTCATACTTCTTGGTTTAAGTAATGTCCTTTCATTAGTATTTCGTGAAT CTACTTTCCCTTCTATATGGACAGGTTGTGAACTACTTGAGGAGCTTGGT GATTTCTTTTTTGGTTGTAGAATGGGTGCTGATTCGTCAACACTTATTTG TTTACTGAACGCTTTCTTTATTGGACTACCTGAAGGAGATGATGTACTCC GAATTAGATTAATTGTCTTATCTCGACTTTCATTGTTTATTTGTATACCC AGGTCAGGGCTTTTTCTTCTATCGAGACTACAATATTTTGCCTCGTCACT CATTGAATTTGTAGCAGCTCTAGGCGATCTGAAGTTTTTTCTTGTCATTG GCGTACTGCGTGTCCTGTCTCTGTGTTTTCGCCGTAATCGATCACTGGCC CGCAAAATTGCTCTTCGTATGAAATTACCATCAGCTCCTCCTCTTTTGGC TTGCTCAAGGTCAATGAGGACAGATGAGCCTGTGAAATCTCGTTGAGTCA AAACTAGAAGAACAATTAAGATTTTTTTTAATCAAAAGATAATGCATAAT TTACAGTAGAAACAAATGGATTTAATGATATTTTCATCCATAGAAAACTA AACAAATGTTTTTCAAACAAGAATTTTTTGGCTTAAAATCATTTCAATAA AACGTGTCACAGAACTCGAATCTTATACCCCTTATGTTATAAGTAGTAAA TAATGAATTGAAAACGAGTCAGTGTTGTCCAGGGACAGGAGTCCGAGTTA TATTTTAGGAAAATGTGATACCTGGCTCATCCTGGTCAGCTTTGATTTCT TCAAAAGCTCCGAGAAGTTCATTGGCATTTGGAGTCACAATATTTACAAG GAGTCCTTTAGTCTTATGTTCAGGACAGATTTCGAACATGAACTGCGAGT CCTCCCCTCTAGAGAAGCTTTTTATGTCCTTGGTATACCATCTGTTTATA CATTTAAGATTTTTATTTGTAATTGAAAAGAAGTTTCTGTAAATCCTTAT TGTTGATTCTGCATTCTTTTTCTTCTGTTTGTCTGGTATGTTTATGTTGA AAGCAGTAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063928TCONS_00063928Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:171933..177442 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.2 0.31 0.23 1.24 0.78 1.02 1.12 0.58 0.87 0.57 0.47 0.48 0.5 0.34 0.49 0.44 0.59 0.59 0.5 0.85 0.76 0.38 0.24 0.17 0.74 0.98 1.29 1.65 1.88