XLOC_040146 (gene) - C. hemisphaerica

Overview
NameXLOC_040146
Unique NameXLOC_040146
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_407:61178..72212+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040146 ID=XLOC_040146|Name=XLOC_040146|organism=Clytia hemisphaerica|type=gene|length=11035bp|location=Sequence derived from alignment at scaffold_407:61178..72212+ (Clytia hemisphaerica)
attccgcggaatagctattccggccggaacagctattccggttccggcat tccgGCATTCCGCCGTTCTGCGTTTTGTCTCTACCCGCAGAAAGTTGCAG CAACCAaatttttaaaccaaaatacTAATActactttataaaaacaaatg agAAGATTATTTGCTTATTGCAAGTAAaagctgaaaagaaaaaagtaagt atGTGTGATTTTAGGATGTAGACACAAAGCAATTAGCAATGGTACAAGAA ACAGAAAGGATGTTAAAGAAAGTCCAGAAAGTCTTGCCagaccagacgtc cgcgctcgataggatcgatcatcgaaacggctcgatgacggatcgatatg atgatcgatggattacttaaggatccggataggagatcgatagaggatcg atactcaagattttttaaagcttatgattagttatcatcgatcttttatc gatctttatCGACCCTATCCActctcgatttacgatcgataacaaatcga ttaacgatcgatgacgaatcgatatactcgattgaaatactagctcgata atggatcaacgaaggatcgatactcaagactttttaatggctgaatcttc catcgatctcgcTCCTATCCGGATCATTGTTATTGTTaattaagtaatcc atcgaccacatatcgatccgtcatcgagccgttccgatgatcgatcctat cgagcgcggacgtctgggcCAGAAGCAGCCCAGCCTGCCAGCCAACCAGC CCATTTTCCCGAAATTaaatctgtttcccttttccaggagagagcttttt ttgaaaaatgaggaGACAAATCTGATTTTCTAGGAATAACAAATACAGTA GTGAGTGTTTCTTCGTTCCAGACTACATTGcctgggctattccattttta aaccattcaggggtattgacgaacttttccaggggatctgagccttgatt ttccaaggggtttttgttcatttttaagattttccaagggggatattaaa ggtttccagggggttctctcCTCCTAAAGTGACATTAATAGTTATTTTTc aggccctttttcacaaaatttcactttccactCCAGGGATGTCGACccct aatttccaggggatagtttgttatccaaaatttccaggaggggggtagtg aaaaaagttcgtcaatacccatgtacaatttttttttgtaatagcCCATT Cgcatgtgttccactacagatttttttcataccgggtgtgccacaaataa gttaccctctttgatttgatattgtaggtagtagaaaagagatttttcaa agattatttcggaatcattcagaggaaagcctaacttaaaatttggtgta ttactttttaattttacttcattggttcaaaagaaTTGGTTCTGAAAGAG CataaaattctgagcaaaaaaatgtattacaacaactctctgactgaAAC ACCCAAAGAAATACAGTCGCtcgaagttcaaaaacataccgatgtcagta cgatcaagacaagatttgacgtcaaacagcgtcaaatcacagtagagctg acgcagttagttggtcttaaagcggctgtattttctttgtgtgttttagt cagaaagttgttgtaatacaattttctgctcagaatttcatgctctatca aatggtatcaatcattttcgtttattttgacttttgaaaataagctattt tcctaccccttattttcccttgcagttttgcctatggcgtcactattttg gNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTATCAAtaattttcg tttattttgacttttgaaaataagctattttcctaccccttattttccct tgcagttttgcctatggcgtcactattttggtcctAAAAAGTTTTCCCAG GCCTAATctgcgtcctccctctcaaaaatatcttgtaatctACTGTTCTT tgaaatagactaaaaatggttaggtcgtaaaaaagatgtcacagaacccc aggcttggccccctactagaAACAACTGTTATTAAAATTACCAAGAACAC AGTCaattaaagtaaattttagaaacactcttgaaagctACAAAGGAGGT GAGTATGAAAAGAATCCTTTAATCGtaaaaattttagcgagactaatttt agcgttttagcaagttttccctattttcgctaaaataaatctcgctaaaa cacgccgaatcaccagatcgctaaaatttatccacgttCTGGTTacattg ccttgatacatttttatcaataggaagggtttcagtgcaaagaaatgcta gaaaacgaactcaatcaataatgtaatatgagtattcgctaaaatttatc cacgcaaaattttttgcaaaaaaaatcaagattttcctgactcgctaata tacgctaaaattagtctcgctaaaatttctacgattaaagtaggcAAAGT AAGAGACAAGGGTTTTAAGATTATTCAGGGGGGGTATcaagtcagtgtac tggcccatagctggtggggtggtgtattttttaggttaaattgagttagt acagtgtactaaaagggaggtcctctgagaaaaatacaatgaaaagttag tacagtgtactaaaagggaggtcctctgagaaaaatacaatgaaaagtta gtacagtgtactaaaagggaggtcctctgagaaaaatacaatgaaaaagt tagtacagtgtactaaaagggtggtcctctgagaaaaatacaatgaaaaa gttagtacagtgtactaaaagggtggtcctctgagaaaaatacaatgaaa aagttagtacactgtactaaaaagggtggtgttctgactgttctgaattg atacacactgagaagttagtacattgtactaatttcagtggtaaaaacac acaaacccAGTGAATTCCTATGTATAGTTGCCCTAATTTGCCAGGACCAA GCTGGTCTGAGACCTTCAAGTCAAGGCTGGTTAAGCTATACAAATTGGTA CACTGATTTTCTCTAAAAGTTTCCTGTTTacttgattggatttgtttcag agtcgcagcatgcgcaagtggagaccgacctTAAGTCCAATCTTGTTTAC GTTTTCTTTAAGGCCCTATCTACATTATGGCAACAACAAGAATTTGAATG TGTAAACGTTCGAATCGAAGCTTTTAagttatataaaaacaaatctgctc tattgttttatgttttttagtAACCTTGTTGAATTGatgttaattgaaaa aaatctgtatataaaGTGAAATCACCGGGGGGAGAgggtgaaaacgaccg tacgttaggccaaaaatcaggtctctaaaatcggtcCCTAACATTGCagg aaaattttggctgaaaatcgacccttatagtgtaatgtttcgaaattttt tacccttttcagggcaaaattttttgaaatttctcaaattttacctcaaa atttggtatttcataaaattttacacccttacagtgcactttttcccact tgctcacaaatcaaccctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtatt tgattgactttgctttgtctgtttcattgtttcagtgtTTGTACTATATA AGGATTCAAgtattttaatattcaaatctttccttttatataattttgtg cttttcttagaaaaatgcttcaaaaccttTGTATATGGTGGCAATCTGGC CAAGAAGAAATTAGAACAGTGCACTATTAGGGGTGGTTTGNACCAACGCT TATTCGCAATAACCAACGCTTATTCGCAGCCCTGAATGCCATCCTCAAAA TTGATAGACAAGGCCTCCTAGTAGACCTAAATTTCAAACATTcatccatt tttttcaaaatttacacATTCAAGCGTAAATGGTTGGCACTTTAGATGTA GCATTCTTGATAGAAAATCTTTTGATTGTCAAATGTTGACAGTGTcgtta ttaattttttgttatatctGACAAACTGATGTTGTGAGTGcatgcacttt atagttttcattcaatttgaagagtcatattctggttttccaTGTTCCCT GATGTTCGAAAACAGCTTGGTAAATTTTGAGTGTTTTTATTTAGATGAAA GTAAGCTCTAAATGTGCTCTTAATACACCTTGAGAGCTGACGCTAGGCTA GACTTGTTACTAAAAATGACATGCATGATGTCTGAGAAGGCCCCCCTTGT TCACATAAGTATAATTTGTTATCCTTtgattgttcatttttttcaatttg aattagCACAAGAGATGAACAAATGGAACAGATCACAAAGTCCAAGTGCT ATACCACGTTTATTACAAAAAAGGCCTTTGTTTGGTTCTGCAGATAGTAT TCCACGCACTCCTTCACCCGTTAAAACTAAACCTGGAAGCAAACTGCCCA CTCCTActataagaaaaacaaactcAACACCAAATCTGAAGAGAGGAGAA ATTTTGAGTGATAGTGCTTCATCAAACAAGGAAACATTTCAGATCAAGAG TGTATCTATAGATGATTCAAGGAATAACTCTATTTCCACAGAACCTTTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTG GCAATCTGGCCAAGAAGAAATTAGaacagtgcactataaggggtggtttc taaacttatctgatcgaaaaaacagctagtacagtgtactaaaagagTGG TATCAAAAATCCGGTCATGGAGaagtcagtacagtgtactgaaagggtgg TGATAAAAATCTAGTTGTGGAAAAAANGTAGCATTCTTGATAGAAAATCT TTTGATTGTCAAATGTTGACAGTGTcgttattaattttttgttatatctG ACAAACTGATGTTGTGAGTGcatgcactttatagttttcattcaatttga agagtcatattctggttttccaTGTTCCCTGATGTTCGAAAACAGCTTGG TAAATTTTGAGTGTTTTTATTTAGATGAAAGTAAGCTCTAAATGTGCTCT TAATACACCTTGAGAGCTGACGCTAGGCTAGACTTGTTACTAAAAATGAC ATGCATGATGCCTGAGAAGGCCCCCCTTGTTCACATAAGTATAATTTGTT ATCCTTtgattgttcatttttttcaatttgaatcaGCACAAGAGATGAAC AAATGGAACAGATCACAAAGTCCAAGTGCTATACCACGTTTATTACAAAA AAGGCCTTTGTTTGGTTCTGCAGATAGTATTCCACGCACTCCTTCACCCG TTAAAACTAAACCTGGAAGCAAACTGCCCACTCCTActataagaaaaaca aactcAACACCAAATCTGAAGAGAGGAGAAATTTTGAGTGATAGTGCTTC ATCAAACAAGGAAACATTTCAGATCAAGAGTGTATCTATAGATGATTCAA GGAATAACTCTATTTCCACAGAACCTTTCGAAGAGCTTCTTATGCCTAGC TCTCACAAGTTGATTCATGATTCAGATTCAGATGATGACAAAAGAGAGTC TTTTTTATCTGGTGGACATGGTGAAGACAACTGGTTGCTTTCAGATGGTG GGAATAAGATACAACCTCTTTTGGAAATGGATGTTTTAGTGGAAGAATCA GATTTTGAGGATGATGATTTACCTGAGGATGCTGAAACTGGTGTAAATAG AATTGAAAATGGTGCTTGTTCTTCCAATAGAGACTTTGTAATTCATCAAA ATGTTGCTGGACCATTAAAAAATCATGATGTGGCTACTATAGAAATTCAA CATAATCGTGCCCAAATTGAGTCATGCCTTGATGACCAAGAACCCTGTAA GCAATCTTCACCTTTAGTATCAATAACATGGTAATAATGGCTCTTTTCAG GTCTTTTATTTTGTAATTGTCCGCCTGGTTTCTCAAAGTTTCAGTCAAGT TGGTCCTTACAGACAAGTTGCTTTGGTCCTTAGTTTTCCTGATGTCAAAC AGCTACATTACATATATATATGTAAAAGAGTTAATGTTACAGTACTGACA ACTTTTTCGACCTGTTTTCtaattttatcttttattttacaGTGTCTCGA GAAACTGCTGTCCCTACAGAAAGTGGCTTTCTTCAACAAGCTACAAAAGA AAATGTAATGTACATCACTGAAAATCTCATTAAGCGTATCACAAAAGTCG CTGatttaaattcaatcaaaaaactAAATCTATGTGTTGCAAAACAGTGG AAAAGGAAAATTCaggtatttcttgattttttggtaattattttttaaga aaactaacATTTTAAATcatcttttttcgtttttcatgtAATTAATACAT GAACCATTAGTTTGACTTGAATGGTCATTacttatttaaatttttgaaat tttgtcattttttgattAATAATTTTGTCTTCTACTGCAGTTTATAGAAA ATTTGGAACCATTGAGGAACTTAGAAATGTTGAAATTATCCAATAACTTC AtcactaaaattcaaaaactcaaCACACTGGTCAATTTGCGCTACCTGGA TCTATCAATGAATCAAATCACAAATGTTGAAGGATTGGAAACACTTGTGA ATTTGGAATCTCTGTATCTTGATTATAATCATATTGAATCTTTCCCTAAT TGGTTTGGCAAGAAAATGAGGAGCTTGCAAACTTTTTCAATCTCAAATAA TAGATTCACAAAGGTATATTATCATACAGCATCTGGATTATAAATGAATA GTGCTCTTTTCACAACCTACGTTACCGACCGCTACTACAAACTATGTATT GAACATAAATAATTTCCTTTCTTttctcaaaacaaacaaacaaacaaact tttaaacaatatttctattttccacattttagtTGGATGAATTTGTGAAG CTAGCATCCTTGTCTAACTTGAGTCTTCTTGATATTCGGGACAACCCATG CTGTCGCCTGAACCACTTGGAAAGTTTTGTTGTTTTCCACTTGCGATCAT TGAATACAATAAATGGAAAAGTCATTTGCATTGAAATGAGGAATATGGCT GATCAGCGATTCTCTAAAGGTGAAATAATGGAAAACTTTAGCCAATATTG CTTAATCTTAAAATGAAGTAAACTAGATTCAATAACCTCAAGAATTAATT AATAACATAACATCCTTTCAAGGTTCTGTTCGATTTTTCCTTGGAGATCC TATTTTCATCATACTCTATCTTTTTTGTATCCTTAGATGAAATTGATTGC CGTGAGAAACAAATCAATGAACTTCAAAAGCAAAATACAGCATTactaaa agaaaatagaaagCTAACTGAAAGTCAAAACCAAACCGGTAATATTGAGA AAAAGCTTATTGATAAAGTTAAAACTTTGAAGAAATCTCTGCACACTTGT ACTCAAGACTTGGAGACCAAAAATGGACTGGTACGTGAAAAAGTTTTAAA CTTGCCCAAAATCTCAGGAAATTGCATTGAACTTTTACCCCTTTAATCAc ataaattcaaaaagtcaaaacattgtTTTGTATGGTTTGAATGAAGATAA TTTGAATGGAGGTAATTTGAATGAAGTAGTTACAATCTTTCCTCAAAAGT GCTTTTTCTCAAATCTCAATTTCAGCTGGAAAGTAAAACAACGGAGTTGA ACAAAGCATGTGAAAAGCAATACAAATTGGAACAAGAGCTAGCTTTTTAC AAATTGGACGCAAAATTTGATGAGATGTGGCAAATGCCTCCTAGAGAAGG CAATGAAATGGTAAGTAAAAAGGTCAactctaaaaatgttttttcctggC CCATTGGGTGACAAAAAAAGTCATGCGGGCAGCCGGGATAACTTTATTTC CAGTCCTTTTCATGATCTTTTTAAAAcatgaaagaaaatgaaaacacaaa gGAGAATATTATAAAGAAATACAAGTAAGTttccaaaaaaggaaaaaaca atCGTTAAAATTCCAATTCATGTACTGTaaacatcatttttttaaacaat ttgttaacattttcagattagaaattttcatttcaatgtttttaaactGA TAATGGTGGTCGGATGACACCGAAAcgtttttaataaatttttgtcttta tgaaaataaaatgaagtcgcttctgtgtttgaaatttttattgaaatcat TCAGGAGGAGCAACCAATTTGAAAACATCATTGTAAACGCATTAACATTT TGCAGAAAATATTAAAtgggaaaattggaaaaaaagaaaagttttaaaaa attggacTTGGTGCTTATGAAGAAGGTTTTTACCCAGCAGAAAAGATTTT CACCAGGCTGGTAGAcggaaaaagaaatatttttaggtttcaGCCAATTT ACAAACTTTATAGTTCTTACTACAAATCAATTCAGAGTAttcttttgcca tttttttgtaaaaaaacttttaattccAACTGCTTTATCACCAACAAGCA ATCAAcacaaactttttaatttttttttgcaggaGACTGAAGAGTTCAAC GAACACGCTTACATTGGGAAAGCCAGATACAAGAAAGCCAGCTTACCCAA AGACAACATCATCTTGAATGAAGAGCAAAGCATGAGATTCTCATCTTTTC TTTCTCGTCTCAATCCAACACAATTtcgagaaaatgaaaatatttgcaCA GCTCTAGAGCAAGCCTTGGATATTGATCTCAGTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064022TCONS_00064022Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064022-proteinTCONS_00064022-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:61178..72212 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.87 1.91 0.98 0.65 17.45 12.44 12.27 10.99 6.83 6.49 6.76 5.07 5.04 4.63 3.68 3.94 3.23 3.72 1.9 2.99 3.19 3.66 1.8 2.66 18.92 19.21 1.13 0.49 1.48 1.2