XLOC_040171 (gene) - C. hemisphaerica

Overview
NameXLOC_040171
Unique NameXLOC_040171
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_407:301959..307821-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040171 ID=XLOC_040171|Name=XLOC_040171|organism=Clytia hemisphaerica|type=gene|length=5863bp|location=Sequence derived from alignment at scaffold_407:301959..307821- (Clytia hemisphaerica)
GCTACTTTATGTATCATCGGTAAAGAAGTTCCATATTCGAGTTTTTTTTC TTGTGGTGAATTATTTGTTTTTACTTGGGATCAGTAATGAAGAAATCAAC GCTGCATTTATGCTTAACAGGTTTGTTAGTTCTATTCTTTTTGGAATGAA ACAGAATTCCCAATTAAAATTTCCTTCTTTTTCGAAATGTTCAGATGAAT ATTTGATCACATTTTTTTGGGTGGGGCCACAAGTAGTTCTTGTTTTTAGC TATATAAATCAGTATTTCTTATCAGCGTTAATCGCGTGTTATCATTATTT TGCGATGATTGGTCAATAAAATGCCCTGGTATCAGTGGGGACAAAATTGG AGTATAGTTTTACACTGGGCACGATTTTTTGGCTAATTTTTCCAATGGGA AGGGGTCCTAGTGGGTCTGTGAGAAGGGGGTGTCTAAGATTCATTCATCA CCATTCGTGTAATTCCTTGAAGATAAGATATTAGCATTAGGACTACGTCC CAACAGCTTTACATTACATTTAATTCTGCATTTGTCATAATAAGGAAAAG GAAATGGCGAGAAGAAATCTTCGAAATCGGTCAAAACCTTGTCACTCCTA AGGTCATTGCTCTATCAAAACCGACCACTTCCCGAAACAAGGATTTTTAT GATCTCTGATTATTTTTCCTTTTTTACATAACATAACATGCACTTTCATT TCCTCGATTTTCATTTTCGATGATTTGGTTTTGATGTTTCTCAGTCAGCA TTGATTAATTAGTCAATTAAATACATGCTTTCGTGTTTCGTGAATCGAAC TACACCCAATCGACCGATTAATAATAACAAAGGTTTTCAAAAATTTCTGA ATGACAAGAGCAATGGTTTTTTGGAATTCTCGAAAAAGTAAAAAAAAATC TGGATTTAAGAGAGCATATAAAATATTTGCACCCTTTGGATGTTCTTAGA TTCTTAGCTTTTTGAGTCTTAAGCCTAAAATTGTTCTTAAAAAACTGTTC TCAACTCCCTCTTAATTTCACTATTTTGCGAGTATTTGCGAAGCAATTTT CTAAGAAATTGGGTGTTTTAGAGTACGCAAAGTCTTGAAATGTTCTTAAA ATGTTCTTAAGATTTTGGCTGTCGAAGCCCTATGTTCTAATATAGTTTGT TCGTGAAAAAAACGTGTAGCGAAGAGCAAACTCACAAATGAATTAAAGCC TTCTGTTTACGTCTTCATTTTTCAAATCCAAAAAATGAGAAAATTATAAG ACAACCCTGACATCAAACACAGATTCCAGAATCACCGAAAAAGCCTCCAT TCTTTGAGATCGGAATCCTCATGATTCTTAATTTGTTGTTTTAGGGATCG TCATCGCACTATTAACCTGCGTGTGTACTATAATTGTTCTCATTACACTG GAGGGAATAGAACTCCAAATTGACGACCTGGCGACCAAATACAACACAAA GCTAGACAAACAAGTTGAAACACCGCAACTTGAATACTTAAGTCAACCCG ATAAACAACAATCAATCTCAGCCAACTCAGTATGTCAAAGTGAGCAAACA AAATTTCTGGAATTCGCAGCTCGGATTGTGATGTTACAAGAACATCAAAG AATTGAGGACTCGACAGAAGGAATCGCTAGAAAGTTAGCATGTCATTATG TAAGTAAAGAATGTGTTTGAGATATTTTGATGCATGTGGAGGTCATAAGG TCAATCGAATTAAATCAATTATCAAACCCTCTCTACAACGGACTGGCCAT TGTATACAACAACATTCCGAGATAATTAATTGGCACACCTACATACTGTG ATTTGCTTTTTTATTTTTCGCAGCGTAATACTTTGTTTATAAGGATATGC ATAAATTATAAATAATTTACATAAGCGAAATTCTAGGAAATTGCAACATC ACGATTTTTATAAGAACCAGTAAATTTTCAAGGCTGACCACCTCTTATTT TCAAGCATTTTAAGGCTAAAATTGTTCTTGTCTTGTTCATGTTTCTGGGA AAAATTTGAGTAGGTTAGTAGGGTATTTTTACTAATTCAACCCTTGATTT GCTTAGAGTTCAGTCATTTCAGGCATTGTACTTTAATCGTTCTCTTTANG GCTTGAGTAGGTTAGTAGGGTATTTTTACTAATTCAACCCTTGATTTGCT TAGAGTTCAGTCATTTCAGGCATTGTACTTTAATCGTTCTTTTTAATGTT CATTTGTCTTGACATTTTTCTTATAAAAATGAGTGCAGCTCTCTCGTTAT TTTGTCTTTGGGGAAACTGTGAAATGATATTAAGTCCGAGTTAAGAGTCT GATTAACTCCGGATAAACTTTGGAAGTATTTCATTGCTGTGATTTAATCA ATTCCAACTATTTCATGCAGTCCTAACAAAGAGGGGAATTAAATCATCAT TCTTTACTGGATGGAGACTATGGTTCCAAAAAAAGAGCAATTAAATAATC AGCCAGCAGTTGCTTATTGGTGATATTGTATTATTTTATTGTTTATAGGG GCGAAAAGCATTAAGCTCTGGACTTGGTTTGACAACGTACAAATTGGAAA TACCGTGTGATAATAGTGTAGATGTTAATTTCAATATCAGAAATGAAATC AAAAGTCTGCGGATAAAAGATCTGAAAGAATACATCATGAATTCAAGAGG GGTAAGCGTCCAAAAAAACGTCTACAAAACGTCCTAAAACGTTCATCTAA CGTCCAAATGTCGTCCAAATGTCGCTGTATATAGCAAATGAGACAGTAGT AATTCAACCCTATAGTACCTTGGACCTTCGACACCCTATAGTATGTGTTA CATAAGGGACATATATAAGAGCTGATTTGAAAAAAAAAACTAAATTAAAC TAAATTTGACGATTTTCTTTCAATTTTTGATTACATTCTTATACCCTTTA AGGCTTAAAATCAGCCTTTTGATCTAATTTGGTCCACTTTTGCTAAAGAT TTTAGCTCAAAGGCTTAATTACTTCTTATGAGACCTCAAATGAAAAACAA ACCACAAACTTTGAATGTCCACATACGTAAACGCCGAGTATTATAGGGTT TAAACCATAAAAGTATATTTCAGAACCTTGAAAAGCCGCGTGAAGAAATT TGACTGTTAAATCAAAGTTTTTCTCACGATCCTTTGTTCGATTCCTAGTA CCTCCTCTGAGAGCACTACTGTCTGAGAATTGATCTGATTTAGGAATAAT TGTGCTAAAAAGGCCTGAAGTGTTTTAAGTATGAATATTTGCATATATTG TAAACTTCAAAGGCTATGATGTACCTTAACCATTTTTCTATCCTTTATTT CCTAGGATTCAAGTGTTATAGAAATCCATATTCAAATTTTCGTTCAATTT TTGAACGAGTTTAACACGATATCATTTCAAGAAACGAATAAAACATTAAA GAAAGATCTGGTTCACATTCGGAATATCTTATTGATGGATATGCAGTTCT TGGAAAATTATAAAAAGGTTAGTACAAAGTGAATTCGAAATTATACTAAA GAACCAATACTCAGTCCCTGCTAATCCTTATCTAAAATACTTTTTTAATT GAAATTTCTCCGTTATTCGAACAAATTTAGCATCCCGTTCGAGTTAGCAA GATATATTTAAGTTTTTAGATCGAACTCTAATAATCTGCAATCAATTGTT ATGATACACGTTTTTTTATAAGAACAAAGTAAACTATACAAGAACACAAT GATTGGATGTTAAGCACAAGTTAAGAACATTTTAAGGCTTTATGGACACT GAAACACCCCTACTTCTTAGGAAAATGGACAAAAATGTTCACAAAATAAT GAAAATAAGAGCATGTCAAGAACATTTTTAGGCTTAAAACTCAAAAAGTA AAGAACATCAAAAAGCTTCAAAATTTTTGAATGGTCTTATACAAAAAAGG TGTAGCGTTGATTTCTTGGGTGCAAAGTGTCTTATGAAGTGAATTTTATA TCAAACGATTTCCTAGGAGCATGATTACCCAAAAAAAAACTAAAAACAAA ACAATAATACCACAGTTATGTTGACACCTCTGCAAAGCCATTGACCAAAA TTTGAAACTTCCCACTTTCTAAAAGTGGTTTGACATATTTTCGAAAGAAA CAGTTTACACCAAAGTTGACACATAGTTTAGCATTTTCTGTTCAGTAAAC AAGCTAAATCACAAAAACCAAAGTTGGAAGGTATACAAGGAGACCCACGC TTTAAAGGATCATTATCCATCAAATTAGGGAAATGAAAATGAGGTTTCTA TTTAATTGGATGGTATTTTTCTTTACTAGACAGTATCCATCACTAATCCC CAATTGAAGCAATTGATACTTTCAGCGGGACTTTGAGTTATACCCAGCTG GCACNGCTAATCCCCAATTGAAGCGATTGATACTTTCAGCGGGACTTTGA GTTATACCCAGCTGGCACACAACGTTGTTTCAACGTTTATTTAACGTTCA CAACGTCCACATAACGCTAGATGAACGTTGAAACAACGTTGTGTGCCAGC TGGGTATACAACAGGGTCTTCGTGATGTCATGATAGTGTTGGTAGAAATC TTCAAATATTAGGGTCATTTTTGAAGACACCTTTTAGAATATTTTTCAAA AATTATTTCTGCAAATTCATTGCATTTTAAAATGGCGAGGAAGAAACTAG TTGTTGAATAGAGGTGAAAAGGTCAAAGTTCTTTTTCTTCCTACAAGAAA TAATTTTTACAAGGAGACATAAAAAGATTTCTTACTTTAAATGTAACGAT CGATAGAAAGTTTTTTTATGACTGTGACGCATTTTGGACCACAAAAAGCT ATAGAAATAGAGTCGTTACACTAGTTTCATTTCTCTCCTCGTAGGCGTCC GAAGTTTCCTTTTCAAGTATACCACAAATTAAAACATACAACAAAATGCC CATGTCTATTTTCCTAAACAAACTTATCTACAAAAACAAAAATATTATTC GAACTCATAAATTTATCCCTTCTTAGTTCCTAATATGCGGCAAAGTACGT CAACGCGAAGCCATGGGTCCAAATAATACTTGACCATGGACGTTGAAAAG ACGATCTGTGACATATCTTTAATATCTTTAATCAGAACTCAATGTAGAAA ATATAAATTAGACAAAAATAGAGAAGTAGGTCTTTGGTACAGATATGGTT TCATGGCCAGAATTATCATTCTATTTCTCCAAATAAAATTGTATTTTGAG TGCATTTTCAGGCCATCTTCAAAATCCCCCTACCCCATGGGCAAAACATT AGTTTCAAGTTCATATCGAAATGCTTCCTACGGCACTGGAGTTAATGCAT TGACTTCAGACATTTTACTCTATTACTAAGTTTACTCAAGCTTTAAGGGC TGAAAAAGTATATTTTAATCAGCATCCAATTTTTCCTGATTTAGAAACTT GTCTACTGTCATCATGTCAACATTTCATCCCTCGATCTCAAGAAAGAACG TTTGATACATCGATTCCACGACGACACATTCTTCAACTCTATGAAACCAA CCTCCACTAATATACATGATACATCTTTCAAAATCTATGGCATTTTACAA CAGTTTCTGAACTATCACAAATGGCTCAGAGTTGATTTATTCCATCGTGT TGTATGCATGCCCATACCTAGTGCCCAGTGCCCAGACATTCTTTTAAATA TGAGGAATAAAAGCAAGAACAAACACCAAGGCACTACAGACCCGAAAGTC AAAAACCAAATTATACTTCAGTAACATTACGAGAGCACAAACATCACATA GCAGCACACTATTTGAGATTATTATCTAAGTTCATTTTGACAAGGGACTA TTAGACCCTTTGACAGGTCAATTTGCTAGTTCAATGCATGTTTTTGAGTC TTTTAGCCAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064078TCONS_00064078Clytia hemisphaericatranscript
TCONS_00064077TCONS_00064077Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064078-proteinTCONS_00064078-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:301959..307821 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0 0.12 0.12 0.2 0.08 0 0.09 0 0.26 0 0.02 0.97 0.27 0.63 0.18 0.03 0.22 0.2 0.43 1.37 0.6 2.4 3.51 0.88 0.84 0.05 0 0.12 0