XLOC_040210 (gene) - C. hemisphaerica

Overview
NameXLOC_040210
Unique NameXLOC_040210
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_409:85827..91426+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040210 ID=XLOC_040210|Name=XLOC_040210|organism=Clytia hemisphaerica|type=gene|length=5600bp|location=Sequence derived from alignment at scaffold_409:85827..91426+ (Clytia hemisphaerica)
ttttgcacatagTACCAAAAGTGTTCCGCATCCTTGCGAGACATGTACAC GCAAATTAATCAACCTTTTGTCACGCTGCGCGCCGtcatttaaattcatt ttttagagTAATATAACACAAATTTAAAATGGCTGATGAAATTCAGAATG TTATGGAAATTaccaaagaagaagaagagcaaaaaagcaaaaatgaaagt gatgaaAATAAACCAAAGCTTTCACGTCATGAGAGTTTGAAAGAATTTCT TGTAATGACGGATGAAAAAGGAGATAAAATAACTTTGGAGGATACTGGAA TCGATGatttgatttccaaagaaacAGCTGAACTAACAGATAATGAACGA ATGTTTCTATATGAAAAAGCAATGTCTTTTCGTGGCCTGGGAAGTAACAA TCATGCTTTATTATGCTTTCTTGGTTGCCTGAAAGGCTTGAAACCATCCT CAAAATCGAAATTTACAATGTTACCTCAATGTATGACTCATATTTCCGAG ATTTACGCAACAGCTGGTGACTACCAAAGAGCTGTTGAATTTATGCAAGG AACAAAACTTTATTATGAGACTGCTATTATTGAATCTGGTCTGCAAGTAG ATAAATATAAAGAATTGTCCAGTGAGAATTATTCTCCTTTGGACTTTGAC CCTTGTTTAGATGAAGCAAAGAGAGCAAATGAGTATGAACGTTTAGCAAA CTCATGTTTAGagcaacaaaaatttcaactAGCTTTAGAATATTGTGGTA AAGCGACTAAATTAAGACAGAAGGCTTATGGAGATGAACATCCGTTGACA ATCAAGAGTTTAGATTTGTTTACCTTGATCTATGCTGAAATGGGGAAAAG TCAATATTCCGAAGCAATGAATAAGGTTGGAGATATTGTGAAACAGTATA AGATTGAATCGGAACAAGCTCAAAAGAAAGCTGTCCAGGTATGAAACTTT GTTTGTctataaaattgtattttttatacaatacaccttttcgaccgtag ccgccaattgccgcgcgggaaTTTTTTTGGCCGTTTCACAACCCTAAAAC ACCAccttcgcacctaaagacaatagaaaaaagtgtcaaaaaaggattag gtcaagtttagggtggtaaattaaataataaagtggcaggcacctgaccg cgcgactacggttgGTTGAATAATTGAATCTGCTACATGTTTCAATATCT TACCactttctgtttattttgtttgtGCAAATTATATGGTATCAAAGCAA AAACTACCcaaaaaatctaattcgaaatcATTGTATCTTATTGACTGGTA AATTGTTAtgaagataaatattttttaatttttcacattttctaAACAGG CTGATGCCTCAAGTGAGAAGGATAATAATGAAACAACAAAGAAAACTGAA GACAGGTAAGCCTAGCCTGGTTAAGcaagccagtttttacaaggtCAAGA TACGACTGAAGCAATATAGCATTATCGgcgctttaatgatttttatgatg tacgaaattttaaatttgccctcagtcacaacttaccatcagcaGATTtt accaagtgactgaatcaatctggattagatttctaggctaaggAAGCCCA GGGGTACTGAAGCAAGTATAGTGCACCTGTGAGCGACAAGGGTAGTTTTT AACCTTCTCAAGTCTGAAGTGATATTTCCCACTTTTGAGTTCTTTAAAGG GTATTatacaaaaacaatgaaaattatgaatCTCTTAAATCTTTcggaaa ttttctttcaaatttagtttttgtgtATCTGCAAATTGAGAACATTAACT TAAAAATCCTATTAACTGGTTTCAGTATATTCTTTTCTAGCAACCAAGTT GCTAAGACTCGAGTCCtgaaatttgtcatttttttcattttctcataaag taaaagctttttaaataaTCTAAGACAAACGATAGCCCTTCACCCAATAA AGTATAAATATGGTaataatatcaggggtggtccGAGCAGATTTTTCGGA AAATGAACTAGAGTGCTAAGCAACCCTGACCCGAAAAGTAGAGttgctta aaaaaaaagtgtacataTATCTTGTAAATCTGGAAAGGTCTGTATTGGCT TTTGTTTTAGCTCATCTTGATAATTGTTGTAAATTTCAGGTGTCTATTTT TGACACGATATTTTACGATGTCATAATGCTGTGATTattacgagaataaa ataaagtaataaaatctTAACACACCATCGAATTTCTGAAAGTTGGAGTT TTTAATTTCGGAAATAAATATCGGATTTTGATGAAGGCTTGGGGAcatga gaagtttttttcgcgtttgtgcaatgcaacatgctccgtCCCaacaacct gaaacgctttctcgtttctccaccccatttttcttatcagcgtgtctttt gggtatttccctcactttttgtcccatgaaacaaaaaaagaaaccacttt tttcttgtgtgggtgggatggagcatgctgcattgcaccaacgcgaaaaa gacttctcgtgtccccaagccttaagacAATTCTTCtgaatattttattt tacaattttagtgATGATTCTACTGCTGCTGGGGACATTAATCTAGATGG AACGAAAGGAGATCAAGATAAGGACAATGACGAAAATAACATCGAAACTa atgatcaaaatgaaaaaacagatggcaataaaaaacaacaagtaCATNac ttctcgtgtccccaagcttTAAGACAATTCTTCtgaatattttattttac aattttagtgATGATTCTACTGCTGCTGGGGACATTAATCTAGATGGAAC GAAAGGAGATCAAGATAAGGACAATGACGAAAATAACATCGAAACTaatg atcaaaatgaaaaaacagatggcaataaaaaacaacaagtaCATTTTGAA GAAAACCCAACTAACCAGGACAACACAGAGCAACATACCCCTGAAATTAG TTTGTTAAACGAAATCACAcctaaaatgtttttcataGTTTTCCTCTTTT CATCTTTATCGGCTGTCTTCGCAACAGTGTCATGGTGTATTTATACTGAT TCTACGATATGCCCGACTCGAGGTTACTTTTATGCTAAAGCGAAGTACCT GTATTACTATTACTGGGTGACTACGGACCCTGATGTTAATTTATATTGAT CGTGGTGTAGGACGGTCATAAATACATGTCTTTAGTTTTTGAAACCTTTA GATGTTATTGACTTTTGGGACTATTTTTTGGGAATATTTCCGATTTTCTA TAAAATTGATTGTTTCAGagtccaaaaatgtttttaaaacattttcttgg tattttggccatcgaagtcttatgttcttttatagtttgtttttagtttg ttcttagttttttcttacaagGGAAACTTGTAATGAGATTTCTCCAGGGA GATTTGCATCAGTATCGAGTAACCCGCACCctgtcaatcaaataaataCC CTACCAATCTATTTTTAGTCAGACCAACTTATATCTAAGTAAGAATGTGT TAAAGAACTGTTTACTCTGTAAAAAGGAATACATGAATCTTTTTTTACCT CCGTAAGTCCCAGGTACGgccgcaaaaacaccaaattagaaaaaacagtc tctcgtagggtacctttttggtgGAATTTGAGaaactttgagaaaatttt ggaatttcagtccttTCACGgtcactttttccaaaaaacgaGTCCCCAta gggtccattttttgaaCTTTAGCGGGACACCCTCGTCTGTCAGCAAGGGT AGCCTCCCTCCCACGGCTGTCATTTATACCAGGATCCTGACATTAAACAA GCTAGAGATTTTGAAACGAAGGTCAAGGATATCGAGGTGTTCAAGTGCTT TTAAGCCACATTAAAGGATTAATACGGCCAGGGCCTTATTAAAAGTGCGG GCGGGTTAGCTCATGTACGgggcaaaaaaaattcccaCGAGAATCTCATT CTTATCGTATAGTGTTGAAAGTTAAAGGTGTCGATTTTTACGATTTTATG atttaaatatttattaaaatttaatttattttattcgTAATGATAATTTT TAATATTAATTGATTTTAGCAGTCAGGTATAAATGGGTGTTacttttcaa aatatgtttcaattttcaaacttcaataCATATGCACAAGAGCAGAACGA AGTAATTCACCCCTCGCTGAATATACAGAATTTATTTCTTCTCGTCTCGA TTATTTCgtgcaattttgaaaaaaagcgaaataatatttttttcatcccA TTTAGTTGAGAAATCCTAGCTTACTTTATTTTTGCTGTTGACAATATTTA TTATTAACGTCTGATATACGAGGGTCAGAAATTTGGCTACCTATTTGGGT ACTAGAAAAATGGGGAATCAGCGCGGAAAATATTGTAATTTGCACACACG AgggaattttagatttagaaatccagaaaatatcaataaatatACTCCAG GTACcaaaattgacttaaaataATGGAGTTCTTAAACTGGAATTAACGGG GGATTCACCCTGTTCGCCCTGGGTTGACTCGGATCCATGATGCTTTGCgg ctttgaaaattaaaacaattaaaacgCTGAGTCTGACGAAGAATGTCAAG TTTTCGTGTTTTTCAATATCTTATGCTATTTTATATTGGTGGAAAATATT ATCATATAAATTTAAGGCTTGGgagacacgagaagttttttctgcgttgg tgcaatgcaagatgctccatcccaccaacctgaaacgctttctcgtgtct ttgggtatttccctcactttttgtcccatgaaacaaaaaaaagaaaccat aagaccgcacttttttcttgtgttggtgggatggagcatgttgatttgaa aaaaaaacttctcatgTCACCGAGCCTTTAGACCGCATTCCTCTCTCTCT CTATATCACCTCAGGATCTGTTAATGCACGTTTACCTTGACTTTTTATTT CCCTCTAACGATTTAGCAGCGTAAAGTCAGGCCGTGACAACGATTTTTTC GGCTTTCCATTCCGGTCTGTAAGTTTTTTTAGGTAGCGAATTGGGTAACC AACGTTTTCAACTGACCCGATATACGATGtgtagatttttttaaattgtt ttatttatgGAAATTTGATTTAGGAAACTTTTTATAAGGAAAATCTCTCT TTAAAGCATCTTTGatattttcgaaatatttttactatagtttgattttt ttttcaattaattagCCATTCGATGAgtaatgatattttgaaaattaaat taaacaAGATTTAAACATATTTCTTATGGTATCGCCTCAATTAATTGAGC CCGGAAACTATGTAATGCAACTTTTTTCGCGAGTCTgcgttttaaaatat ttttttgggaaCGAGCATGAAATCAGACGAATACGAGGATATTTCCAAAA CTTCACGTGGATTTATTTTCATGATTCAACAATCTCATGCGATTTTACGA AAAGGGATTGAATTCAATTGCTAAAAAGGCATCTTTTAATCTAATCTTAC ACAAGCGCTCATATTGAAACCAAcactttcttcattttcatttgtttgtg tgtaaaccacgcgggtcacacgttctggatgggaaataaatacccctttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064134TCONS_00064134Clytia hemisphaericatranscript
TCONS_00064135TCONS_00064135Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064135-proteinTCONS_00064135-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_409supercontigscaffold_409:85827..91426 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.83 2.65 0.97 0.95 28.72 21.24 15.79 15.01 6.16 7.02 4.45 4.63 3.15 2.44 1.04 1.99 2.25 2.72 2.89 2.9 3.53 2.14 3.39 5.06 4.13 6.89 0.64 0.68 1.94 1.58