XLOC_040346 (gene) - C. hemisphaerica

Overview
NameXLOC_040346
Unique NameXLOC_040346
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_411:197536..211017-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040346 ID=XLOC_040346|Name=XLOC_040346|organism=Clytia hemisphaerica|type=gene|length=13482bp|location=Sequence derived from alignment at scaffold_411:197536..211017- (Clytia hemisphaerica)
ATTTCAACGTTTCAACACCATACGATCAATGGTAAGACAGGTTTTTTTTA ATTTTACATTCTTGATGTGAAATATTGTGTACTGTACTTTTTTATTTTCA AAATATACAACAGCAGTACAACAGCCACAGCCTGATATACAGTTTATATA TTTTATTTTTTGTCTCTGCGACTCTGGTTGATATGGTTGATATTGTATTG AGTGCGTTAAACGTGAGCACTACCCCTTTGGAGGAGTCACACTGATAAAA GCAGGTACTGGCCGGGTACCGTCAACTGCTCTAACTGTCTCAGGACCCTG CCGACGCACCGGACTTAACGCCCACCGGACACGCGAAAGTCCGGTGTAAA ATGAGAATTTTTTTTTATTGCGTCCGGTGTAGCGAAAGAATACTTTTTGC CACCTGACAGCCCGGTGCGTCGTCAGGGTCCTACTGTCTCTAACTTGGGA CTATCTAAAAAAAACATGCGACGGCAATTCGGCCACCACCATTATGACCC TCAACATGGCCCGAGAATTCTTGGGCCAAAACTTTTATTGGAATTCGCGT AAAGCCCGAGTATGGCCCGAGCTGGGCCGTGTTCGGGCCACACGCGGGGC ACGCACGGGCCACACTCGGGCCAATTTTTGAAAACATGATTTATAAACAG GCGTGTAATTTTGGGTGCATGTCACTAGTCCGACAGTAAAATAGTCTGAA TCTATAAAATAAATTTAGAATTTAGAAGTCTTTTTTTTCGATGTCACTTT TGTCCGAAAACGAAAGATTTTACAGTGTCGAATGTTGAGTAAGGGTTTTT TTACTGAGATAATATTAATAAAAGTTCATTTTGGCATTTTGACATAATTA GAAATAAAGGACCAATCAAATTTGCTTAGAAATAATTTATAGCANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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GATTTAACAGTAAGTGAAAATACAGGCCAGATATCAACCAGTCCAGACCA GTCCCATGTTTCGACCAATCATCCCAAGTTAGAGCAGTTGACAGTACTGA CATTTGCAACCAACAAGGAAGCTTTGCTCGATTTATCGTATGTTGTCCGA CCCAAAAATAATAAATCGACACTTAGAGAAAGGAAAAATTAGGGTTTTTG GGACTCTGAGATCAATTTTCACTTGATTTTTGTCCAAATTTTGGAAAATT GCGACCCTTTGAGAGAGGAAATTTTGAATTTCGTGATTTTTGGACCCTTA CAGCCAGACGATCTCAATCGAATGGAATCGACGATCGAATGCAATCGAAT CTCAATCGAATATTACCGCAATTTTCAAATTCGATTGATATTCAATTGCG TTCGATTAGGATTTGACTGCATTCGATTGTGTTTGAATGCGTTCGATTGG GTTCGTATATGTTTGATAGGACTTTTCCTTATTTGGCAACCACCGATGTA AAAATTTTCTTCCAAACAAAAAATAAATAAAAAATAAGTAAAATACAAAA TTAAATGTAAACAAAAATGGTAGAGTAGAGCTGCGAGCGGAGCTGCGTAG TTGTATTTTAATGACCAGCCAGGTCTTTTATTTGAGGGCTATGTATGTTA GCCTCCACTGATGCAAGTTACCCAATCTCACGGTACTCGTTAAAGCTCTA GTCTGATTCGTGGACCTATTCAGAACCAAAACACAGGTTCGGTATGGTTC GTTGTATAGACCTTTTCGCCTTTCCATCTGCCATATTGAATTGTATGCAA AATTTATGGTGGCCGAATTGATGTGGTGAAATTCCCTTAGAAAGTATGCA AAACATATGCAAAAAGAAAGTATTANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TGAAAGTTTGATGTGTGTACTCCGTCTTCGTGGAATTTCTTAATGGCATG AAAACAGAATATGCTATGTCTTTAAGAACAAATTTCTAAAAGGCTTTTGT TGTTCTGTGAATATTTCTTTTCGGATTGAGAAATTCCATCTTTTATTGTT ACTAATAATATTTATTTATAACATGCTTTGTTGTCTTTTTAATCTTTGTG TAAACTTGCATATGTTTTGCATACTTTCCAACTAAATCCAACCACGGCTT TTTCGTTCCTCTATTTTTGGCATACAATTCAAGATGACGGATGGAAAGGC GAAAAAGTCTATCTTAAGGAAGACAATTGAATGCACATAAAGACACATAT ATTTTTCCGATGCAGGATGGGGGAATAGTGTTACGACCTGTAGGCAACCT AGTAGGGTTGGGTATGGGTGTGGTTTGGGTGTGGTTATGTATCAGATTGG CTAGGAAATGGGTTATTATTAGTTAGGGTTAAGGTTGGAGCTCAAAACAA GCACTTTTTTGTGATTTTCTCTTAATAATACAATATAGTTTGTACAATAT AAATAGCTGTTAGAAATGGTCTTTTGCATGAGTCTGTGGCATAGTGCATT TAGTGGGTTTGAATCCCACCTGTGACAACCTTTGGTAAATCATTTAAACT GTTGAAAAGTAAGTAAGTATTTATTTACCATTTTAGCACTACAAAGAAGA TACAATTAGTGATGATATACACAACAAATATATGGAAGGAGTACAGATTA CATTTATAACATTATATATTTGTAAATTATTCAAGTTAGTTACCTTGAGG CAGGTCATACACTCCACCTAAACGCGCAACAAACAGTGTTTAAGTGAATA TCAATAATTATAAGAATATCTTATTTATGTGCTTAACTTCAGTAAACTTT GAGTACTTCATTGAAGATAAAGAAGGAGAAATATAAAAAATGCACTGGTC AATTTTGATAAACATTGTTGAAAGTTTGAGAAAATTCTACTGTAGCAGAA ATTTTTTACTGCCAATTAAAGGCACAGTCTGCTTATACTTACTATGTTTG CTATATCCCCTAGGCAAAAAACGGTAAAAAAAAGATACAAGCAACAGTGT GTGCTAAAATATTTTGGCTTCACCTTCGATTTCAAGCAAAGGTCATAGCA ATAGAGGGCTTATTAGAAAAATTTAAACATAAAATTCAAAAAGAATACCA ATCATCATATAGAGCACTAAACAATATCCCAATTCTAGGTTTAGTTTGTT CTACCTTTCATTATAACAGAAAATATCTTTTAAAATCTTTGTCCGCCATC ATTGAGTGTTGCATTTGACATGTTCAAATACATCAACGATGCCATTCTGA TTGATCACTCATCCTGCAAAAATTGTAAAATTGGGGGGAAGTTTTCCAGA TTAGTGAAAATTTGTTCTAACTTGAATAGTTATGTTAATGGTCCTCTAGC GGGTTACAAGGAACAATTGAATGATTAACTGCGTGGAAAAGTACTACGGC AATAGTTGAGAGTGGGTAAAGTGGCGGTAATATAAAGAATCATTCAAACA AAACAAAATCCGATGTTAACTTTGATGAGCAGAGAGGTCTATATTTCAGT TGTTTTACCCTTAGCTCAATGTTGTAAAATTTTCACTCAAATTTAAAAGT TTGAAATTTTAATTGATATACATAGAGCTGCAAAAAAACTAAAGGATGGC AACTGTGAGGAAGATTGGTTTATTAACACACACATCGAAGAATTTCCTTA AATGTCTAGAAAGTCAATTACCAAAGAATGGTTACCATCTACAAGAAATT ATGTTTGATCAAGAGAAAATAAACAATTCAAAAGACTGCAAGGAAGTTGA GGCAGGTATATAGCTCCAAATTCTGATGTTGTTGTTTTTTTCAACACACC TTGGTTACCATCTCTATTTGTTCCTTAATATTATTCTGGAATAAATGTCT ATGTTTTGGGATGTTGAATTTTAAACTCTTTCTATATACAGCCTTGGAAA AGATGAAAAATGATGTGGAATCAATGGATATTGTGATAGCTGATGGTCGT TTGATGCCCAAAATATTACATAAAGTGAACAAAGTCAAATGGATTCACTT GATTTGGGCTGGTAATTTCTGCTTTGTTTATTAATAATCTGTTGGAGAAG GAAAAATCCAAATTCCAAAATTTCCGATATGGTTTCCTTTTAGGCCGAAA TAAAAAAGCCTCTTGTTTCTGGAAATCAGCCCGGTGAACTTTTCTTTAAG AGTCCCCTGGCCATAAAAAAATATGTTTGGATTGATCCAGGATTCTTTGG AGAAACAGACCAATAGTAAAAAAAATTGTATTTTTCCATAGTAAACTACC TTATTACACAAATATTACTAGTCATTTTACTAACACGAATTGGAAACTTT CACGAGTGCTAATAAAAACCCCCTTAATTAAAACCAGCCACTGTTTACTT GAAAAGCTGAAAAATTTGTGTTGATTTCAAATCGTGCAAATTTCAAGGCC GTTGAATACTTGCCTAGTAATTTTCATTTAATAAGGTAGTCTTTTGCGAC CAACTGGGTAAGTTTTTTTTGTCACCTGCATTTCCATTTTTCCCTTTAAA TATATCAATGATAAGTTTGAAAAAAATGATTGTTTCAGAAGTTTTAAATT TGTTTAATATATTGTGTTTGCAAAGTAGTTTGCAATGTCATAAATACTTC CTTCACTTTCAAAACAATAACAGAATAATGCATGATCAGTAAGATTAATA TCAGGCAAATTATATTCTTAGGTGTTGATCCAGTCGTGGATAGTCTAGCT GGAAAGTCTATTCCATCAATGCCAGTAACACGATTTGGAGGTTACTTCGG TGAACATATGGCTGAATATGCAATCAGTCATATTGTAGGTTATGAAAGAG GTTCATACACAATATATGAAAACCAAAAACAAAATAATTGGTAAGGGAAG AGCTGAAGCTTTGCTGAGTGTTATCAGCCTTAGTCTTTAATTGAATATAA TGGATGTACAAAGTGAAAGCAGATTATTATAAAATCAAATCTAGGCTTAT TGAATTACATAAAATATGCTCATTTCAATTTTTTGTTGGACTTGCCAAGA TTCTTCCCACAACCTTTTATATCCAAAGTCCTGCGAAAATGAAAAAAATA GGTTAGCTACCCCTTTTTTACCTTAATTCACTGGAATGATATTAAGAAGG GTTTTAAAATATGTTGTGTAATTAAAAAAAAAATTATGCTGCATTGGAAC ATTTATTTATAAATAGGCTGAAATTAAGCGAACAACTCGGTGAATATCGT ATGATCAAAGATCTGAAGTTCACCATTCTCGGGTGTGGTGATATTGGACA CACAATTGCACGTCATCTTAAACAATTTGGTGGTACAGTTTACGGTATGG TCAGACAAACCAGAAATTCCAATTCCTCAGACTATGTTGATCAATATTTC ACATTTGATGAATTACCAGAGTTTCTCAAAAAAAGTGATTATGTATGCAA TGTACTGCCATCTACTCCAGGAACTAGAAACTTGTTGACACCTGAGCTAC TTAAGAATTGCCAAAACACAGTGTTTATGAATCTTGGTCGTGGAGATGTC ATCAAGGAAGATAATATTCTCAGAGCTCTAGAAGAGAATCGGTTTAAACA AGCCATTTTAGATGTGTTTGCGGTAGAACCTTTACCTAAAGAAAGCAAGC TGTGGAGTCATGAGAGAGTCACAATAACACCACATTGTTCAGGCCAAACA CAAATACAAGAGGTATTATATGGAAATATACTCCCTTTGGTATATGGTAA TCTTAAAGCAAATTATTTTGGTCCTTTTTGGACCTACCCCGGTGGAGGTC CTATAAATTAACCTTTGTCCGTTCGTCCGTTCGTCCGTTCGTTCGTTAGT TATTAGCTTTCCTCATGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNTTATTAGCTTTCCTCATGATTGGCTCGTTAGTTTTTTCTGATTTT TTGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGAAT TTCAAAAAAAAAATTTTTTGGGCAAATTTGGGCAAAAAAACGGCTAAAAA ACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTAATTTTTTCTGATT TTTTGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGA ATTTCAAAAAAAAATTTTTTGGGCAAATTTGGGCAAAAAAACGGCTAAAA AACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTAATTTTTTCTGAT TTTTTGTATGAAAGTAGGGTACCATCGTAGGTAAAAGATGGCTTAAGCAG ATTTTTGCAAAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAA GAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAAT TTTTTTTATGAGATAGATGTTTTTTTTGCTCATGAGGGCTTACTTTTAAA GAATATGTGTGTTTCGATTTGTTTTTTTTCTGAATTTTTGCATGAAAGTA GGTTAAAGATGGCTCAAGCAGATTTTTGTAAAAAAAAGAATTTTTCAGCT CAAAAAACGCATATTTATCTATAAGAATCACTATTAATAAGCATACATCA ATGTTCTGAAAATTACTGAATTTTTTGATGAGATATGTATTTTTGCTCTC GAAGTCTTGAATATGAAAGAAATTTTGGTTTCTAAACGTGTTTTTTTTTA TAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTCTTCTAAA TGATTGTTTAATGGTCACGCTTATGTAGATACCAATTATATATGTGTTAA ATGCATAACCAGGTAGGTCCATAAAAGTATCACTTTTTGTATTGTAGAAT TCTTCTGTTGAATATTATCTGGAAGACAAATAATGCCCTTATTCTACCCT TTTTCTGTCATTTTTCGAACAATTCTACTCCTCCATTTTCAAAACAAGAC TTGGCTTTGTGTCTGGTTTTTGGACCTACACTGGTGGGTGGAGGTCCTTT AAATTAACCGATGTTCGTCCGTCCGTTCGTCTGTTACCAGCTTTTCTTGG GATTGGTTTATTAGTTTTTTTTGATTTTTTGCACAGTCATGCAAAATGGT GATTCCCAAAAAGTGATAGAGCCTGATTTTTCGGAAAATTCTTTTTGATC AGATCTGTTCTTATTTGGGGAAATTCCCTTATGTCACTTTTAGGAAAAAA GAGCATTTCTTGTAATTGGATTGATATTTGTTTCTGATTTTTTGCACTTT GATGTAAAATGGTAATAATAACCGATTTTCAAAAAATATTTTTTTGGGCA AATTCGTGGGTCAAAATGTGCCTAAAAATGGGGTTTTCTGGACTTGTGAT ATTGCTTCATTAGTTTTTTTTTAAAATTTTTGGACAGCTCACTACACTTT TTTACTCTCGTGCTATTTGTCATATTTTTATCTGATTCTCATCATCAGGT AGGTCCATTCAGCATGTTACTTGTTGTGTTTGCATTCTACAATTTAGATT AATTTAATAATTTCTTTCCCTCTATCAAATGAGATGGGATACCATTTTTC TACCCTGCTGTTTTTATTCATTTTAGACTGTTGCATCTTTCTTGGAACAA CTGAAGCTGTTTGAAAACAATGAACCCTTGGAATTCTTAGTTGATTGGAA GAGTGGTTATTAAGAATATCATTTTTTAGGATGTATAATATTGTTTTTCT TAAAAATTATTGGAAACGATGAGTCACAAATGGACCATAAGATGTACTGA TTGTTATATAATCCATGTTGTGATTATTTATATTTATCTACAATACATTG CGTTGCATGTAGATTCTGTCAGCATAAACAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064347TCONS_00064347Clytia hemisphaericatranscript
TCONS_00064346TCONS_00064346Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064347-proteinTCONS_00064347-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_411supercontigscaffold_411:197536..211017 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44 40.17 24.76 23.66 28.99 20.86 16.25 17.76 9.56 10.21 6.3 6.17 4.92 3.67 9.68 9.98 13.52 9.21 2.35 2.66 8.05 5.67 26.9 22.78 6.66 8.37 6.86 5.84 14.61 14.76