TCONS_00064347 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064347
Unique NameTCONS_00064347
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1252

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064347 ID=TCONS_00064347|Name=TCONS_00064347|organism=Clytia hemisphaerica|type=transcript|length=1252bp
ATTTCAACGTTTCAACACCATACGATCAATGAGCTGCAAAAAAACTAAAG
GATGGCAACTGTGAGGAAGATTGGTTTATTAACACACACATCGAAGAATT
TCCTTAAATGTCTAGAAAGTCAATTACCAAAGAATGGTTACCATCTACAA
GAAATTATGTTTGATCAAGAGAAAATAAACAATTCAAAAGACTGCAAGGA
AGTTGAGGCAGCCTtggaaaagatgaaaaatgatgtGGAATCAATGGATA
TTGTGATAGCTGATGGTCGTTTGATGCCCAAAATATTACATAAAGTGAAC
AAAGTCAAATGGATTCACTTGATTTGGGCTGGTGTTGATCCAGTCGTGGA
TAGTCTAGCTGGAAAGTCTATTCCATCAATGCCAGTAACACGATTTGGAG
GTTACTTCGGTGAACATATGGCTGAATATGCAATCAGTCATATTGTAGGT
TATGAAAGAGGTTCATACACAATATATGAaaaccaaaaacaaaataattg
GCTGAAATTAAGCGAACAACTCGGTGAATATCGTATGATCAAAGATCTGA
AGTTCACCATTCTCGGGTGTGGTGATATTGGACACACAATTGCACGTCAT
CTTAAACAATTTGGTGGTACAGTTTACGGTATGGTCAGACAAACCAGAAA
TTCCAATTCCTCAGACTATGTTGATCAATATTTCACATTTGATGAATTAC
CAGAGTTTCTCAAAAAAAGTGATTATGTATGCAATGTACTGCCATCTACT
CCAGGAACTAGAAACTTGTTGACACCTGAGCTACTTAAGAATTGCCAAAA
CACAGTGTTTATGAATCTTGGTCGTGGAGATGTCATCAAGGAAGATAATA
TTCTCAGAGCTCTAGAAGAGAATCGGTTTAAACAAGCCATTTTAGATGTG
TTTGCGGTAGAACCTTTACCTAAAGAAAGCAAGCTGTGGAGTCATGAGAG
AGTCACAATAACACCACATTGTTCAGGCCAAACACAAATACAAGAGaCTG
TTGCATCTTTCTTGGAACAACTGAAGCTGTTTGAAAACAATGAACCCTTG
GAATTCTTAGTTGATTGGAAGAGTGGTTATTAAGAATATCATTTTTTAGG
ATGTATAatattgtttttcttaaaaattattGGAAACGATGAGTCACAAA
TGGACCATAAGATGTACTGATTGTTATATAATCCATGTTGTGATTATTTA
TATTTATCTACAATACATTGCGTTGCATGTAGATTCTGTCAGCATAAACA
GT
Run BLAST on NCBI

protein sequence of TCONS_00064347-protein

>TCONS_00064347-protein ID=TCONS_00064347-protein|Name=TCONS_00064347-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MATVRKIGLLTHTSKNFLKCLESQLPKNGYHLQEIMFDQEKINNSKDCKE
VEAALEKMKNDVESMDIVIADGRLMPKILHKVNKVKWIHLIWAGVDPVVD
SLAGKSIPSMPVTRFGGYFGEHMAEYAISHIVGYERGSYTIYENQKQNNW
LKLSEQLGEYRMIKDLKFTILGCGDIGHTIARHLKQFGGTVYGMVRQTRN
SNSSDYVDQYFTFDELPEFLKKSDYVCNVLPSTPGTRNLLTPELLKNCQN
TVFMNLGRGDVIKEDNILRALEENRFKQAILDVFAVEPLPKESKLWSHER
VTITPHCSGQTQIQETVASFLEQLKLFENNEPLEFLVDWKSGY
Run BLAST on NCBI

transcript from alignment at scaffold_411:197536..211017-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064347 ID=TCONS_00064347|Name=TCONS_00064347|organism=Clytia hemisphaerica|type=transcript|length=13482bp|location=Sequence derived from alignment at scaffold_411:197536..211017- (Clytia hemisphaerica)
ATTTCAACGTTTCAACACCATACGATCAATGGTAAGACAGGTTTTTTTTA
ATTTTACATTCTTGATGTGAAATATTGTGTACTGTACTTTTTTATTTTCA
AAATATACAACAGCAGTACAACAGCCACAGCCTGATATACAGTTTATATA
TTTTATTTTTTGTCTCTGCGACTCTGGTTGATATGGTTGATATTGTATTG
AGTGCGTTAAACGTGAGCACTACCCCTTTGGAGGAGTCACACTGATAAAA
GCAGGTACTGGCCGGGTACCGTCAACTGCTCTAACTGTCTCAGGACCCTG
CCGACGCACCGGACTTAACGCCCACCGGACACGCGAAAGTCCGGTGTAAA
ATGAGAATTTTTTTTTATTGCGTCCGGTGTAGCGAAAGAATACTTTTTGC
CACCTGACAGCCCGGTGCGTCGTCAGGGTCCTACTGTCTCTAACTTGGGA
CTATCTAAAAAAAACATGCGACGGCAATTCGGCCACCACCATTATGACCC
TCAACATGGCCCGAGAATTCTTGGGCCAAAACTTTTATTGGAATTCGCGT
AAAGCCCGAGTATGGCCCGAGCTGGGCCGTGTTCGGGCCACACGCGGGGC
ACGCACGGGCCACACTCGGGCCAATTTTTGAAAACATGATTTATAAACAG
GCGTGTAATTTTGGGTGCATGTCACTAGTCCGACAGTAAAATAGTCTGAA
TCTATAAAATAAATTTAGAATTTAGAAGTCTTTTTTTTCGATGTCACTTT
TGTCCGAAAACGAAAGATTTTACAGTGTCGAATGTTGAGTAAGGGTTTTT
TTACTGAGATAATATTAATAAAAGTTCATTTTGGCATTTTGACATAATTA
GAAATAAAGGACCAATCAAATTTGCTTAGAAATAATTTATAGCANNNNNN
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NNNNNNNNNNNNNNNTGAACTCATCGTTAATCTATAAGAGAAAAGATTTA
TAGGATTCAGTACTTCGCCCCTACTCCGTACTTAGATTAGACTCAATGGA
CCCAGCCAGACAGGCTGAAAAGCGTTATGAAAAAGGAGGCCCGAACATGG
GCCAAATGACTCGGGTCATGTTCGGACCAAAAGAATTGATAGGGTCTCTC
GGCCCTAACATGGCCCGAAGAGGCCTGAGAATTCTCGGGCCATGTCGAGA
GTTGTCCACCATTTCACCAAACAGTTGGGTGTTTAAGATATAAACTGCAA
TTATTGCTCTTTTCNATTTCACCAAACAGTTGGGTGTTTAAGATATAAAC
CAGTATAAACTGCAATTATTGCTCTTTTTGGCAATTATTGCCGAAAACGG
CAATTTTTTCAATGATGAAATGCTGAATCAGCAGAAAAAAGTTAAAAAGG
GCACGCTATCACATCAGTGAAAGTTATCGTGACATGGAATGACAGAAAGT
ATGATTGATAAACTTGGGTGGAATTATCAAAACAAATTTGTTGTCAAATA
GATTTAACAGTAAGTGAAAATACAGGCCAGATATCAACCAGTCCAGACCA
GTCCCATGTTTCGACCAATCATCCCAAGTTAGAGCAGTTGACAGTACTGA
CATTTGCAACCAACAAGGAAGCTTTGCTCGATTTATCGTATGTTGTCCGA
CCCAAAAATAATAAATCGACACTTAGAGAAAGGAAAAATTAGGGTTTTTG
GGACTCTGAGATCAATTTTCACTTGATTTTTGTCCAAATTTTGGAAAATT
GCGACCCTTTGAGAGAGGAAATTTTGAATTTCGTGATTTTTGGACCCTTA
CAGCCAGACGATCTCAATCGAATGGAATCGACGATCGAATGCAATCGAAT
CTCAATCGAATATTACCGCAATTTTCAAATTCGATTGATATTCAATTGCG
TTCGATTAGGATTTGACTGCATTCGATTGTGTTTGAATGCGTTCGATTGG
GTTCGTATATGTTTGATAGGACTTTTCCTTATTTGGCAACCACCGATGTA
AAAATTTTCTTCCAAACAAAAAATAAATAAAAAATAAGTAAAATACAAAA
TTAAATGTAAACAAAAATGGTAGAGTAGAGCTGCGAGCGGAGCTGCGTAG
TTGTATTTTAATGACCAGCCAGGTCTTTTATTTGAGGGCTATGTATGTTA
GCCTCCACTGATGCAAGTTACCCAATCTCACGGTACTCGTTAAAGCTCTA
GTCTGATTCGTGGACCTATTCAGAACCAAAACACAGGTTCGGTATGGTTC
GTTGTATAGACCTTTTCGCCTTTCCATCTGCCATATTGAATTGTATGCAA
AATTTATGGTGGCCGAATTGATGTGGTGAAATTCCCTTAGAAAGTATGCA
AAACATATGCAAAAAGAAAGTATTANNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTTCAAATTGGGTGA
TTAATTTTACACTTTTTGAACAAAATCTTTTGGTTTTTACATCTGAAAAC
ACAAGTGAGGAAGACATTGTTGTTCATTATGTTTTACATACAACAGGAAA
AGAAAAAACACTTATAAAATAGTGATTTCTCTTCTCTTTTTAAAAATAAA
AGTTTATGTTAAACTTTTAAGTTTTTTTTCTGCCATTTTAGAATGAATAA
TTATGGTGTCAGCCCCTCTAATTATGCGAAGACCTTAGTTATAAATTTAA
AAAAGAGGGAATTCTGATTGGTTTTAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAGTTTCAGTTACATA
ATTTGTGGGTTCCACTGGACTCTCTATTTTTTCCACCATCAGATTATCAA
AGGCAAAAAATAGTTGAGCTCCAGACCCTGGAGCCTTATTCGGCTGACTG
TACTGTAAATTATTCTCCTGGGAATAGAGCCGCCAAATGATCAAATCAAA
ACATTGATAATGCGTGACGTCATAATTACTGCTTTTCAGTTTGCGTGTTT
TGAAAGTTTGATGTGTGTACTCCGTCTTCGTGGAATTTCTTAATGGCATG
AAAACAGAATATGCTATGTCTTTAAGAACAAATTTCTAAAAGGCTTTTGT
TGTTCTGTGAATATTTCTTTTCGGATTGAGAAATTCCATCTTTTATTGTT
ACTAATAATATTTATTTATAACATGCTTTGTTGTCTTTTTAATCTTTGTG
TAAACTTGCATATGTTTTGCATACTTTCCAACTAAATCCAACCACGGCTT
TTTCGTTCCTCTATTTTTGGCATACAATTCAAGATGACGGATGGAAAGGC
GAAAAAGTCTATCTTAAGGAAGACAATTGAATGCACATAAAGACACATAT
ATTTTTCCGATGCAGGATGGGGGAATAGTGTTACGACCTGTAGGCAACCT
AGTAGGGTTGGGTATGGGTGTGGTTTGGGTGTGGTTATGTATCAGATTGG
CTAGGAAATGGGTTATTATTAGTTAGGGTTAAGGTTGGAGCTCAAAACAA
GCACTTTTTTGTGATTTTCTCTTAATAATACAATATAGTTTGTACAATAT
AAATAGCTGTTAGAAATGGTCTTTTGCATGAGTCTGTGGCATAGTGCATT
TAGTGGGTTTGAATCCCACCTGTGACAACCTTTGGTAAATCATTTAAACT
GTTGAAAAGTAAGTAAGTATTTATTTACCATTTTAGCACTACAAAGAAGA
TACAATTAGTGATGATATACACAACAAATATATGGAAGGAGTACAGATTA
CATTTATAACATTATATATTTGTAAATTATTCAAGTTAGTTACCTTGAGG
CAGGTCATACACTCCACCTAAACGCGCAACAAACAGTGTTTAAGTGAATA
TCAATAATTATAAGAATATCTTATTTATGTGCTTAACTTCAGTAAACTTT
GAGTACTTCATTGAAGATAAAGAAGGAGAAATATAAAAAATGCACTGGTC
AATTTTGATAAACATTGTTGAAAGTTTGAGAAAATTCTACTGTAGCAGAA
ATTTTTTACTGCCAATTAAAGGCACAGTCTGCTTATACTTACTATGTTTG
CTATATCCCCTAGGCAAAAAACGGTAAAAAAAAGATACAAGCAACAGTGT
GTGCTAAAATATTTTGGCTTCACCTTCGATTTCAAGCAAAGGTCATAGCA
ATAGAGGGCTTATTAGAAAAATTTAAACATAAAATTCAAAAAGAATACCA
ATCATCATATAGAGCACTAAACAATATCCCAATTCTAGGTTTAGTTTGTT
CTACCTTTCATTATAACAGAAAATATCTTTTAAAATCTTTGTCCGCCATC
ATTGAGTGTTGCATTTGACATGTTCAAATACATCAACGATGCCATTCTGA
TTGATCACTCATCCTGCAAAAATTGTAAAATTGGGGGGAAGTTTTCCAGA
TTAGTGAAAATTTGTTCTAACTTGAATAGTTATGTTAATGGTCCTCTAGC
GGGTTACAAGGAACAATTGAATGATTAACTGCGTGGAAAAGTACTACGGC
AATAGTTGAGAGTGGGTAAAGTGGCGGTAATATAAAGAATCATTCAAACA
AAACAAAATCCGATGTTAACTTTGATGAGCAGAGAGGTCTATATTTCAGT
TGTTTTACCCTTAGCTCAATGTTGTAAAATTTTCACTCAAATTTAAAAGT
TTGAAATTTTAATTGATATACATAGAGCTGCAAAAAAACTAAAGGATGGC
AACTGTGAGGAAGATTGGTTTATTAACACACACATCGAAGAATTTCCTTA
AATGTCTAGAAAGTCAATTACCAAAGAATGGTTACCATCTACAAGAAATT
ATGTTTGATCAAGAGAAAATAAACAATTCAAAAGACTGCAAGGAAGTTGA
GGCAGGTATATAGCTCCAAATTCTGATGTTGTTGTTTTTTTCAACACACC
TTGGTTACCATCTCTATTTGTTCCTTAATATTATTCTGGAATAAATGTCT
ATGTTTTGGGATGTTGAATTTTAAACTCTTTCTATATACAGCCTTGGAAA
AGATGAAAAATGATGTGGAATCAATGGATATTGTGATAGCTGATGGTCGT
TTGATGCCCAAAATATTACATAAAGTGAACAAAGTCAAATGGATTCACTT
GATTTGGGCTGGTAATTTCTGCTTTGTTTATTAATAATCTGTTGGAGAAG
GAAAAATCCAAATTCCAAAATTTCCGATATGGTTTCCTTTTAGGCCGAAA
TAAAAAAGCCTCTTGTTTCTGGAAATCAGCCCGGTGAACTTTTCTTTAAG
AGTCCCCTGGCCATAAAAAAATATGTTTGGATTGATCCAGGATTCTTTGG
AGAAACAGACCAATAGTAAAAAAAATTGTATTTTTCCATAGTAAACTACC
TTATTACACAAATATTACTAGTCATTTTACTAACACGAATTGGAAACTTT
CACGAGTGCTAATAAAAACCCCCTTAATTAAAACCAGCCACTGTTTACTT
GAAAAGCTGAAAAATTTGTGTTGATTTCAAATCGTGCAAATTTCAAGGCC
GTTGAATACTTGCCTAGTAATTTTCATTTAATAAGGTAGTCTTTTGCGAC
CAACTGGGTAAGTTTTTTTTGTCACCTGCATTTCCATTTTTCCCTTTAAA
TATATCAATGATAAGTTTGAAAAAAATGATTGTTTCAGAAGTTTTAAATT
TGTTTAATATATTGTGTTTGCAAAGTAGTTTGCAATGTCATAAATACTTC
CTTCACTTTCAAAACAATAACAGAATAATGCATGATCAGTAAGATTAATA
TCAGGCAAATTATATTCTTAGGTGTTGATCCAGTCGTGGATAGTCTAGCT
GGAAAGTCTATTCCATCAATGCCAGTAACACGATTTGGAGGTTACTTCGG
TGAACATATGGCTGAATATGCAATCAGTCATATTGTAGGTTATGAAAGAG
GTTCATACACAATATATGAAAACCAAAAACAAAATAATTGGTAAGGGAAG
AGCTGAAGCTTTGCTGAGTGTTATCAGCCTTAGTCTTTAATTGAATATAA
TGGATGTACAAAGTGAAAGCAGATTATTATAAAATCAAATCTAGGCTTAT
TGAATTACATAAAATATGCTCATTTCAATTTTTTGTTGGACTTGCCAAGA
TTCTTCCCACAACCTTTTATATCCAAAGTCCTGCGAAAATGAAAAAAATA
GGTTAGCTACCCCTTTTTTACCTTAATTCACTGGAATGATATTAAGAAGG
GTTTTAAAATATGTTGTGTAATTAAAAAAAAAATTATGCTGCATTGGAAC
ATTTATTTATAAATAGGCTGAAATTAAGCGAACAACTCGGTGAATATCGT
ATGATCAAAGATCTGAAGTTCACCATTCTCGGGTGTGGTGATATTGGACA
CACAATTGCACGTCATCTTAAACAATTTGGTGGTACAGTTTACGGTATGG
TCAGACAAACCAGAAATTCCAATTCCTCAGACTATGTTGATCAATATTTC
ACATTTGATGAATTACCAGAGTTTCTCAAAAAAAGTGATTATGTATGCAA
TGTACTGCCATCTACTCCAGGAACTAGAAACTTGTTGACACCTGAGCTAC
TTAAGAATTGCCAAAACACAGTGTTTATGAATCTTGGTCGTGGAGATGTC
ATCAAGGAAGATAATATTCTCAGAGCTCTAGAAGAGAATCGGTTTAAACA
AGCCATTTTAGATGTGTTTGCGGTAGAACCTTTACCTAAAGAAAGCAAGC
TGTGGAGTCATGAGAGAGTCACAATAACACCACATTGTTCAGGCCAAACA
CAAATACAAGAGGTATTATATGGAAATATACTCCCTTTGGTATATGGTAA
TCTTAAAGCAAATTATTTTGGTCCTTTTTGGACCTACCCCGGTGGAGGTC
CTATAAATTAACCTTTGTCCGTTCGTCCGTTCGTCCGTTCGTTCGTTAGT
TATTAGCTTTCCTCATGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTATTAGCTTTCCTCATGATTGGCTCGTTAGTTTTTTCTGATTTT
TTGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGAAT
TTCAAAAAAAAAATTTTTTGGGCAAATTTGGGCAAAAAAACGGCTAAAAA
ACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTAATTTTTTCTGATT
TTTTGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGA
ATTTCAAAAAAAAATTTTTTGGGCAAATTTGGGCAAAAAAACGGCTAAAA
AACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTAATTTTTTCTGAT
TTTTTGTATGAAAGTAGGGTACCATCGTAGGTAAAAGATGGCTTAAGCAG
ATTTTTGCAAAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAA
GAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAAT
TTTTTTTATGAGATAGATGTTTTTTTTGCTCATGAGGGCTTACTTTTAAA
GAATATGTGTGTTTCGATTTGTTTTTTTTCTGAATTTTTGCATGAAAGTA
GGTTAAAGATGGCTCAAGCAGATTTTTGTAAAAAAAAGAATTTTTCAGCT
CAAAAAACGCATATTTATCTATAAGAATCACTATTAATAAGCATACATCA
ATGTTCTGAAAATTACTGAATTTTTTGATGAGATATGTATTTTTGCTCTC
GAAGTCTTGAATATGAAAGAAATTTTGGTTTCTAAACGTGTTTTTTTTTA
TAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTCTTCTAAA
TGATTGTTTAATGGTCACGCTTATGTAGATACCAATTATATATGTGTTAA
ATGCATAACCAGGTAGGTCCATAAAAGTATCACTTTTTGTATTGTAGAAT
TCTTCTGTTGAATATTATCTGGAAGACAAATAATGCCCTTATTCTACCCT
TTTTCTGTCATTTTTCGAACAATTCTACTCCTCCATTTTCAAAACAAGAC
TTGGCTTTGTGTCTGGTTTTTGGACCTACACTGGTGGGTGGAGGTCCTTT
AAATTAACCGATGTTCGTCCGTCCGTTCGTCTGTTACCAGCTTTTCTTGG
GATTGGTTTATTAGTTTTTTTTGATTTTTTGCACAGTCATGCAAAATGGT
GATTCCCAAAAAGTGATAGAGCCTGATTTTTCGGAAAATTCTTTTTGATC
AGATCTGTTCTTATTTGGGGAAATTCCCTTATGTCACTTTTAGGAAAAAA
GAGCATTTCTTGTAATTGGATTGATATTTGTTTCTGATTTTTTGCACTTT
GATGTAAAATGGTAATAATAACCGATTTTCAAAAAATATTTTTTTGGGCA
AATTCGTGGGTCAAAATGTGCCTAAAAATGGGGTTTTCTGGACTTGTGAT
ATTGCTTCATTAGTTTTTTTTTAAAATTTTTGGACAGCTCACTACACTTT
TTTACTCTCGTGCTATTTGTCATATTTTTATCTGATTCTCATCATCAGGT
AGGTCCATTCAGCATGTTACTTGTTGTGTTTGCATTCTACAATTTAGATT
AATTTAATAATTTCTTTCCCTCTATCAAATGAGATGGGATACCATTTTTC
TACCCTGCTGTTTTTATTCATTTTAGACTGTTGCATCTTTCTTGGAACAA
CTGAAGCTGTTTGAAAACAATGAACCCTTGGAATTCTTAGTTGATTGGAA
GAGTGGTTATTAAGAATATCATTTTTTAGGATGTATAATATTGTTTTTCT
TAAAAATTATTGGAAACGATGAGTCACAAATGGACCATAAGATGTACTGA
TTGTTATATAATCCATGTTGTGATTATTTATATTTATCTACAATACATTG
CGTTGCATGTAGATTCTGTCAGCATAAACAGT

Coding sequence (CDS) from alignment at scaffold_411:197536..211017-

>TCONS_00064347 ID=TCONS_00064347|Name=TCONS_00064347|organism=Clytia hemisphaerica|type=CDS|length=5160bp|location=Sequence derived from alignment at scaffold_411:197536..211017- (Clytia hemisphaerica)
ACTGTTGCATCTTTCTTGGAACAACTGAAGCTGTTTGAAAACAATGAACC
CTTGGAATTCTTAGTTGATTGGAAGAGTGGTTATTAAGCTGAAATTAAGC
GAACAACTCGGTGAATATCGTATGATCAAAGATCTGAAGTTCACCATTCT
CGGGTGTGGTGATATTGGACACACAATTGCACGTCATCTTAAACAATTTG
GTGGTACAGTTTACGGTATGGTCAGACAAACCAGAAATTCCAATTCCTCA
GACTATGTTGATCAATATTTCACATTTGATGAATTACCAGAGTTTCTCAA
AAAAAGTGATTATGTATGCAATGTACTGCCATCTACTCCAGGAACTAGAA
ACTTGTTGACACCTGAGCTACTTAAGAATTGCCAAAACACAGTGTTTATG
AATCTTGGTCGTGGAGATGTCATCAAGGAAGATAATATTCTCAGAGCTCT
AGAAGAGAATCGGTTTAAACAAGCCATTTTAGATGTGTTTGCGGTAGAAC
CTTTACCTAAAGAAAGCAAGCTGTGGAGTCATGAGAGAGTCACAATAACA
CCACATTGTTCAGGCCAAACACAAATACAAGAGGTGTTGATCCAGTCGTG
GATAGTCTAGCTGGAAAGTCTATTCCATCAATGCCAGTAACACGATTTGG
AGGTTACTTCGGTGAACATATGGCTGAATATGCAATCAGTCATATTGTAG
GTTATGAAAGAGGTTCATACACAATATATGAAAACCAAAAACAAAATAAT
TGCCTTGGAAAAGATGAAAAATGATGTGGAATCAATGGATATTGTGATAG
CTGATGGTCGTTTGATGCCCAAAATATTACATAAAGTGAACAAAGTCAAA
TGGATTCACTTGATTTGGGCTGATGGCAACTGTGAGGAAGATTGGTTTAT
TAACACACACATCGAAGAATTTCCTTAAATGTCTAGAAAGTCAATTACCA
AAGAATGGTTACCATCTACAAGAAATTATGTTTGATCAAGAGAAAATAAA
CAATTCAAAAGACTGCAAGGAAGTTGAGGCAGACTGTTGCATCTTTCTTG
GAACAACTGAAGCTGTTTGAAAACAATGAACCCTTGGAATTCTTAGTTGA
TTGGAAGAGTGGTTATTAAGCTGAAATTAAGCGAACAACTCGGTGAATAT
CGTATGATCAAAGATCTGAAGTTCACCATTCTCGGGTGTGGTGATATTGG
ACACACAATTGCACGTCATCTTAAACAATTTGGTGGTACAGTTTACGGTA
TGGTCAGACAAACCAGAAATTCCAATTCCTCAGACTATGTTGATCAATAT
TTCACATTTGATGAATTACCAGAGTTTCTCAAAAAAAGTGATTATGTATG
CAATGTACTGCCATCTACTCCAGGAACTAGAAACTTGTTGACACCTGAGC
TACTTAAGAATTGCCAAAACACAGTGTTTATGAATCTTGGTCGTGGAGAT
GTCATCAAGGAAGATAATATTCTCAGAGCTCTAGAAGAGAATCGGTTTAA
ACAAGCCATTTTAGATGTGTTTGCGGTAGAACCTTTACCTAAAGAAAGCA
AGCTGTGGAGTCATGAGAGAGTCACAATAACACCACATTGTTCAGGCCAA
ACACAAATACAAGAGGTGTTGATCCAGTCGTGGATAGTCTAGCTGGAAAG
TCTATTCCATCAATGCCAGTAACACGATTTGGAGGTTACTTCGGTGAACA
TATGGCTGAATATGCAATCAGTCATATTGTAGGTTATGAAAGAGGTTCAT
ACACAATATATGAAAACCAAAAACAAAATAATTGCCTTGGAAAAGATGAA
AAATGATGTGGAATCAATGGATATTGTGATAGCTGATGGTCGTTTGATGC
CCAAAATATTACATAAAGTGAACAAAGTCAAATGGATTCACTTGATTTGG
GCTGATGGCAACTGTGAGGAAGATTGGTTTATTAACACACACATCGAAGA
ATTTCCTTAAATGTCTAGAAAGTCAATTACCAAAGAATGGTTACCATCTA
CAAGAAATTATGTTTGATCAAGAGAAAATAAACAATTCAAAAGACTGCAA
GGAAGTTGAGGCAGACTGTTGCATCTTTCTTGGAACAACTGAAGCTGTTT
GAAAACAATGAACCCTTGGAATTCTTAGTTGATTGGAAGAGTGGTTATTA
AGCTGAAATTAAGCGAACAACTCGGTGAATATCGTATGATCAAAGATCTG
AAGTTCACCATTCTCGGGTGTGGTGATATTGGACACACAATTGCACGTCA
TCTTAAACAATTTGGTGGTACAGTTTACGGTATGGTCAGACAAACCAGAA
ATTCCAATTCCTCAGACTATGTTGATCAATATTTCACATTTGATGAATTA
CCAGAGTTTCTCAAAAAAAGTGATTATGTATGCAATGTACTGCCATCTAC
TCCAGGAACTAGAAACTTGTTGACACCTGAGCTACTTAAGAATTGCCAAA
ACACAGTGTTTATGAATCTTGGTCGTGGAGATGTCATCAAGGAAGATAAT
ATTCTCAGAGCTCTAGAAGAGAATCGGTTTAAACAAGCCATTTTAGATGT
GTTTGCGGTAGAACCTTTACCTAAAGAAAGCAAGCTGTGGAGTCATGAGA
GAGTCACAATAACACCACATTGTTCAGGCCAAACACAAATACAAGAGGTG
TTGATCCAGTCGTGGATAGTCTAGCTGGAAAGTCTATTCCATCAATGCCA
GTAACACGATTTGGAGGTTACTTCGGTGAACATATGGCTGAATATGCAAT
CAGTCATATTGTAGGTTATGAAAGAGGTTCATACACAATATATGAAAACC
AAAAACAAAATAATTGCCTTGGAAAAGATGAAAAATGATGTGGAATCAAT
GGATATTGTGATAGCTGATGGTCGTTTGATGCCCAAAATATTACATAAAG
TGAACAAAGTCAAATGGATTCACTTGATTTGGGCTGATGGCAACTGTGAG
GAAGATTGGTTTATTAACACACACATCGAAGAATTTCCTTAAATGTCTAG
AAAGTCAATTACCAAAGAATGGTTACCATCTACAAGAAATTATGTTTGAT
CAAGAGAAAATAAACAATTCAAAAGACTGCAAGGAAGTTGAGGCAGACTG
TTGCATCTTTCTTGGAACAACTGAAGCTGTTTGAAAACAATGAACCCTTG
GAATTCTTAGTTGATTGGAAGAGTGGTTATTAAGCTGAAATTAAGCGAAC
AACTCGGTGAATATCGTATGATCAAAGATCTGAAGTTCACCATTCTCGGG
TGTGGTGATATTGGACACACAATTGCACGTCATCTTAAACAATTTGGTGG
TACAGTTTACGGTATGGTCAGACAAACCAGAAATTCCAATTCCTCAGACT
ATGTTGATCAATATTTCACATTTGATGAATTACCAGAGTTTCTCAAAAAA
AGTGATTATGTATGCAATGTACTGCCATCTACTCCAGGAACTAGAAACTT
GTTGACACCTGAGCTACTTAAGAATTGCCAAAACACAGTGTTTATGAATC
TTGGTCGTGGAGATGTCATCAAGGAAGATAATATTCTCAGAGCTCTAGAA
GAGAATCGGTTTAAACAAGCCATTTTAGATGTGTTTGCGGTAGAACCTTT
ACCTAAAGAAAGCAAGCTGTGGAGTCATGAGAGAGTCACAATAACACCAC
ATTGTTCAGGCCAAACACAAATACAAGAGGTGTTGATCCAGTCGTGGATA
GTCTAGCTGGAAAGTCTATTCCATCAATGCCAGTAACACGATTTGGAGGT
TACTTCGGTGAACATATGGCTGAATATGCAATCAGTCATATTGTAGGTTA
TGAAAGAGGTTCATACACAATATATGAAAACCAAAAACAAAATAATTGCC
TTGGAAAAGATGAAAAATGATGTGGAATCAATGGATATTGTGATAGCTGA
TGGTCGTTTGATGCCCAAAATATTACATAAAGTGAACAAAGTCAAATGGA
TTCACTTGATTTGGGCTGATGGCAACTGTGAGGAAGATTGGTTTATTAAC
ACACACATCGAAGAATTTCCTTAAATGTCTAGAAAGTCAATTACCAAAGA
ATGGTTACCATCTACAAGAAATTATGTTTGATCAAGAGAAAATAAACAAT
TCAAAAGACTGCAAGGAAGTTGAGGCAGACTGTTGCATCTTTCTTGGAAC
AACTGAAGCTGTTTGAAAACAATGAACCCTTGGAATTCTTAGTTGATTGG
AAGAGTGGTTATTAAGCTGAAATTAAGCGAACAACTCGGTGAATATCGTA
TGATCAAAGATCTGAAGTTCACCATTCTCGGGTGTGGTGATATTGGACAC
ACAATTGCACGTCATCTTAAACAATTTGGTGGTACAGTTTACGGTATGGT
CAGACAAACCAGAAATTCCAATTCCTCAGACTATGTTGATCAATATTTCA
CATTTGATGAATTACCAGAGTTTCTCAAAAAAAGTGATTATGTATGCAAT
GTACTGCCATCTACTCCAGGAACTAGAAACTTGTTGACACCTGAGCTACT
TAAGAATTGCCAAAACACAGTGTTTATGAATCTTGGTCGTGGAGATGTCA
TCAAGGAAGATAATATTCTCAGAGCTCTAGAAGAGAATCGGTTTAAACAA
GCCATTTTAGATGTGTTTGCGGTAGAACCTTTACCTAAAGAAAGCAAGCT
GTGGAGTCATGAGAGAGTCACAATAACACCACATTGTTCAGGCCAAACAC
AAATACAAGAGGTGTTGATCCAGTCGTGGATAGTCTAGCTGGAAAGTCTA
TTCCATCAATGCCAGTAACACGATTTGGAGGTTACTTCGGTGAACATATG
GCTGAATATGCAATCAGTCATATTGTAGGTTATGAAAGAGGTTCATACAC
AATATATGAAAACCAAAAACAAAATAATTGCCTTGGAAAAGATGAAAAAT
GATGTGGAATCAATGGATATTGTGATAGCTGATGGTCGTTTGATGCCCAA
AATATTACATAAAGTGAACAAAGTCAAATGGATTCACTTGATTTGGGCTG
ATGGCAACTGTGAGGAAGATTGGTTTATTAACACACACATCGAAGAATTT
CCTTAAATGTCTAGAAAGTCAATTACCAAAGAATGGTTACCATCTACAAG
AAATTATGTTTGATCAAGAGAAAATAAACAATTCAAAAGACTGCAAGGAA
GTTGAGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040346XLOC_040346Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064347-exon-scaffold_411-1575043694:210987..211017TCONS_00064347-exon-scaffold_411-1575043694:210987..211017Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1575043694:201563..201742TCONS_00064347-exon-scaffold_411-1575043694:201563..201742Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1575043694:201307..201426TCONS_00064347-exon-scaffold_411-1575043694:201307..201426Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1575043694:200478..200646TCONS_00064347-exon-scaffold_411-1575043694:200478..200646Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1575043694:199656..200151TCONS_00064347-exon-scaffold_411-1575043694:199656..200151Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1575043694:197536..197791TCONS_00064347-exon-scaffold_411-1575043694:197536..197791Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1510915933:210987..211017TCONS_00064347-exon-scaffold_411-1510915933:210987..211017Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1510915933:201563..201742TCONS_00064347-exon-scaffold_411-1510915933:201563..201742Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1510915933:201307..201426TCONS_00064347-exon-scaffold_411-1510915933:201307..201426Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1510915933:200478..200646TCONS_00064347-exon-scaffold_411-1510915933:200478..200646Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1510915933:199656..200151TCONS_00064347-exon-scaffold_411-1510915933:199656..200151Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1510915933:197536..197791TCONS_00064347-exon-scaffold_411-1510915933:197536..197791Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1491911889:210987..211017TCONS_00064347-exon-scaffold_411-1491911889:210987..211017Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1491911889:201563..201742TCONS_00064347-exon-scaffold_411-1491911889:201563..201742Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1491911889:201307..201426TCONS_00064347-exon-scaffold_411-1491911889:201307..201426Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1491911889:200478..200646TCONS_00064347-exon-scaffold_411-1491911889:200478..200646Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1491911889:199656..200151TCONS_00064347-exon-scaffold_411-1491911889:199656..200151Clytia hemisphaericaexon
TCONS_00064347-exon-scaffold_411-1491911889:197536..197791TCONS_00064347-exon-scaffold_411-1491911889:197536..197791Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064347-proteinTCONS_00064347-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_411supercontigscaffold_411:197536..211017 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.6348	19.4248	11.4445	11.819	27.5539	20.3586	15.4123	16.7486	7.15557	6.87792	5.17101	4.99084	2.98989	3.66388	4.23874	6.12993	7.77533	7.364	1.25712	1.01242	3.65113	0.822337	13.8445	9.79086	6.33901	5.33813	4.97974	3.49562	9.40309	7.21337
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006140D-isomer_DH_NAD-bd
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0051287 NAD binding
Blast
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BLAST of TCONS_00064347 vs. Swiss-Prot (Human)
Match: GRHPR (Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens GN=GRHPR PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.697e-18
Identity = 62/215 (28.84%), Postives = 94/215 (43.72%), Query Frame = 1 
Query:  421 AEYAISHIVGYERGSYTIYENQKQNNWLKLSEQ-LGEYRMIKDLKFTILGCGDIGHTIARHLKQFGGTVYGMV-RQTRNSNSSDYVDQYFTFDELPEFLKKSDYVCNVLPSTPGTRNLLTPELLKNCQNT-VFMNLGRGDVIKEDNILRALEENRFKQAILDVFAVEPLPKESKLWSHERVTITPHCSGQTQIQETVASFLEQLKLFEN--NEPL 1050
            AE A+S ++   R      E  K   W       L  Y + +     I+G G IG  IAR LK FG   +    RQ R   ++++  ++ +    PE   +SD++      TP T  L   +  +  + T VF+N+ RGDV+ +D++ +AL   +   A LDV + EPLP    L + +   I PH    T       S L    L      EP+
Sbjct:  112 AELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQS-TVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVS---TPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM 322
The following BLAST results are available for this feature:
BLAST of TCONS_00064347 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRHPR2.697e-1828.84Glyoxylate reductase/hydroxypyruvate reductase OS=... [more]
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