XLOC_040409 (gene) - C. hemisphaerica

Overview
NameXLOC_040409
Unique NameXLOC_040409
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_415:10331..23800-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040409 ID=XLOC_040409|Name=XLOC_040409|organism=Clytia hemisphaerica|type=gene|length=13470bp|location=Sequence derived from alignment at scaffold_415:10331..23800- (Clytia hemisphaerica)
CACGCGCGTTACATAAGAACGATGAACAACGGATGGAAACGATTCAAACC TGCCGATATTAGTTCATTCTAGCTAAAATGATCCAAGCTTGGGCGGACTA GGCGGTAGTGGCCATTTTGTGGGAGAGGATTGCTCAAAACAGTAACAAAA CTGAAACTGAAATCTACTTTACACTTTTTTGGAATTTCTTGGCAGTATGG TAAGACTATTTATTCTGATCTTTTACCACTAAAAATGTTTTCGTCAATCT CCTCCGGTACCTCAAAATTTATGTTGTTTGTGTTGTTTTTTTTATATTTA CATTTCAACATTTTTTTTGAAAAGCTGTCATTAACAGTTGTGTTTAACTG TAATATACTAAGACTTTAAGGTATATCTTTAGTATAGTAAGACAACACAG TGTTTTAGCATTCAAATTCATTTACATAACCTTATAAAGGAGTCCCTCGC GTTAGGAAATTTTCAGTATTTTATGTCCGTCTATCCCGTCCACCCCCATC CCATGACATGTATGATCGATATGATGGACATATAAAAAATATTGAAGGGC ATTTTTATGATTCTGCCAACTCTTTAGACTTTCCTGTATTTTTGTCTCAT GCTAAAAAGTATTCAGTCTAGGAAATCCTTTTATTGCGCGCTTAAACTTC CGAGATTTAAATGTGCAATTACATGGTCAAAACTATCAAAACTATTACAT ACTATCAAAATTGCAGAGTTTTTTAAGGGTGCCACGCATACCATGAGCAT ATATGTCAGCCTGAAATAATTTTCAAGTTGTCGTTTATTATCTGTTTAAA AAGGTTTGGTAGAGGTCAAGTAAAAAAAGACGTTCCACGGCTTGCTAATT CCACTACTTCCAAAATCTGAACAATTTTTACAAAATTTCTGAAATTTCAC TAAGAACTTGGCTGGAGGTGAATTATAAGCAGTGGCATGGTGGGAAAATT TCTCTGGGGTGGCCAAGGCAATTTATATGGCGCCCTTTTTAAAGATTTTT TGTTTTTGGCGCCTCTCTTTATACGCTCATTATGAACACAAAAAAGGGAG TGTGCGAGCGAAGCGAGCCAGAAAATTTTGAGTTTTTGAGGTGATGAGGG GCGCCATTTTTGTTTTTTCATTTGTCAATCTTTCGATATGGGCGCCTGAA AAATCCTTCTTGGCGTTGCTTATTTTTGGGCGCCCCTTCTAAAAAGGGCT CCGCTGGGGGGGCCTGGGCCCCCCTGCCACCACGCCACTGATTATAAGCA TGATTCATAAGCATATAATAAGCATAAACTATGCCTGGATGCTTTCAGAA TTTTTAAGCATACACAAGCCTGACCAAGGGGCATACACTTGCTTATAAAA AAAACATGTAGTGGCAAAACAATGCAGGGTGTTCAACGTCACTCGCGCGA CAAGTTACACATTCGTTCTTTGTTAATCGTATCGGGCGATAGGTGGTTAG GCGGCAGGTGGTTAGGCGGCAGGTGCCTGGTATTTTACCCAAACCTGTTC GGGATAGTAATAAATACCAACCAATACATGGACATGTAATTGCGTACCAG GACTCATTTATCCCAGCATCTATTAACTGGTGGAATAAATTGCCAGCTAA CATTTTGAATATGGAAGATAGGAATGACTCCACGTATCTTGGCATTCTCA GAACATTTTGTTTAGCCTTATGCTCGTTACTCTTAATCTCGATAACCTAG GCTTTGTCCTCAACCAAACATACTTTAGGTTGTTTTTTTTTAGAATTTTT AACATATTTATTATTGTTATTGAATAAACATACAAACATTTTTTATTATT AAACCAATTTCATTTATCTTATTTTTGTTAATGCTTTTATATGTAGGGAA AACAAACATTTATGTTGTTAACTACTGAAATACATAGATAGATAGGTGTT CTCTAATTCTCCAATCGGTGTCCGGTCATTTTGAATGAAAAAAAAAAAGT TAAAAAGGGCAAGCTATCATTGAAAGTTATCGTGACATGTTTTATGACAG AAAGTATGATTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTT AACAGTAAGTGAAAATACAGGCCAGATTGTCTCATCTCAAGATATTAACC CTTGAAAACCGTGTTTTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTTG CGCTTTTTGAAGCTCAATATCTCGAGTTAGGTACTGAAATCACCTATACT TGCAATTTATCTCTAATCCTAATTTTTTGAGAGCTTTCCAAAAATATACA ACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATCTTTAACCCTAT GATTTTTGGCTGAGACCGTCATATTTGCCCGAAAATCACACCAAAGTGTC CGGAAAAAAAATTGGAAACATCGTAATTTCGATTCCCCTACCCCTTAGCT TTCCAAAAATGTATAGCAAGGGCTTATAACAAAACAATCGAGCGATTTAA AAAAATCGAACAAAATTTCCCCTACTATGGGTTTCATCGCTATTTAAGTG GTCAAAGAAAAGTTTCAGAGATTCTTCACCGTGCTGCCAGAGAAAGAAGA TGTCATCGATATATCTCCACCAGACTAAAGGTTTGAGATTGTGTGGAATC TTTTCTTCAAGATCACTCATAAAGAGAATGGCATAGTTTGGTGCCATTTT AGTACCAATTGCTGTACCTTGCTTTTGTTTAAAAACCTCGCTGTTGTGTT CAAAGATGTTATTTTCTAGAACACATTTCGAAAGCTCCAAAAGACTGCTG GTAGAGATTGTTTTTTCATCCCTACTATCAAAAGCATGCCGCAGAGATTC TAGACCATCCTCATGGGGGGTACTAGGATAGAGACCAACTACGTCTGCGG TGCGGGCGATTTGCGCTAAATCTGTACCGTGTCCCGTCCGAAATCATGAA AAATAAAGTTCATTTTTTAAACATAACTCTACTTTTCTATGACAGTCTAT AGCCTATATTTCATGGAAATGTACCTTGACACCACCTTTTAAGGCCTAAT AATAAAGATATAGGGGCTCGTGGAGCTGTTAGAGCGTATGAAAATGGTAA ATTTGTTGTAAAAAAAATCAAAACTAACTTGCACTTTNGGAAAATCAAAA TTCCAGGTCAAATACCTTCCTGGAAAGAAAGTGCTACAATAAAACTGAAG CACTTTTTTGCTAAAAATTGCCAAAACGAGAAAAAATTGACACAAAATTT ATGATTGCATACTAATGATAGACAGTTAAAACATGAAATTTTGCAGAAAG TGTACCATTACCAAGCTGTATCTGATGAAAAAAGAAAAAAATCATTAACA CTTTTAAAACCTTAATGAGATATATGCAAAAAATGATTTCGGACGGGACG GTACAGATTTAGTGCAAATCGGCCAGTGCATAAAATGGTATCAGATGGTA AATTAGGAAGAGAGGAAAGCTTTTTCAAAAAATCATTTGTGTCTTTAACA AATGATTTGACCTGTTTAGCNAGTAAGGAAGCTGTAGAACAGCCTGAAAT TGTTTGTATAAAGGCCTTCCTCAAATTAGAATACATCTTAAAAATCTGTA TCACCTTTTTCATTTTTTTTCAGGGTGATTTGCACTAAATCTTTCCTGTC CCGTCCGAAATCATTTTCATAAAAATCTGTTTATTTCAAGTTTTGCTAAA CTTTTTCTTTCTACATATTATCAGTANACCTGTTTAGGTAGAGGCTTTAG ATGAAAATCAAGAAATGCCGAAATATTCTCCGTATAATACGAAGAATTTG AAATAACAGGTCTCCCGGGAACCCTGTAAAGTTGTTTGTGGATTTTTGGT AATAAATAAAAACGACCAATCTTAGGGTTTTCAACCAGAAAATAATCCAA AGTATCTCTAGGAATGTCACCTCTTTTATCAACAGAGTCAATGCAAGACT CGACAAACTCAATGAGCGGACTAACAGCATCCCCACTGAGCTTCTCATAC ACACTCTCATCTGCGACTCAGCTTCCCTAAGATAATCCTCCCAATCCCAA ACCACAATACACGAGCCCTTGTCAGCCCCCTTGATGATAATTGAAGTGTC ATTCCGTAGAGAATCAATAGCTATCCTTTCCTCCTTAGAAATATTGTGTT CCCTTATTCTAGTGTTAAGATTAAGAATTTCTTCTTCCAAACAACTAAGA TACATCTCAATAGCTGCATCTTGGTTTCTTGGGTTAAAATTCTTAGACCG GTTCGATTTCTTTTTAAACTGATCCGGCACAAAATCACGTTCGTCGTTTT GAAAAAACCACTTCAACCAAAGCTTCCTCCCAAAGCGCTCAAGATCGTTT TTAAGAGCAGCTTTGTCAACAAAACGACTTTCATAAGATGTTATCTAGTA TTAGTTTAGCCTTTTTCAGTTTAGCCCATCTGACATTCTTTTGTCATAAA AGTTTTATGAGCTTAGATCTGTATGATCGCTTTAAAAGAAATGTCTTTTG AAAATCTAGAAGTACCAGTAGATACCCCTTAGAACCTACAAAGTTGCACT TTGGCTCTCTTACAGTAGCCACCAAACTTAATTTAATATTGTTTAGTTTA CTTTTTTAAAACCTCTTATAAATGTACTTGTACATAAAATACCGTGAGAT CGGGTAACTTGCATCAGTAGTTAGGAGACCCGTCTACTCTATCGTTGTGT GATTTCAAAGTATATCATTTAGTTAAAACAAATAATAATATAGAAATAGT AGTCGGGTATTTTTGTAGATGCCAAATCTGGTCGCAGAATTCTATTGGCT GTTAAACAATTGTTGAAATCACATGATATATTGTTTTGATTGGAAGTGCG TGAACCTGCTTGGCTAACCTTATCAACAGCTTTTTTGGCACAAAATTCAA ACCAAATGTAAACAAATTCAAACTGGGTCAAAAATACCATATTCTCAATG AGTAGCTTATGATGGGATTTTTGCTTATGTGGTGTAAGTTTGAATAGAAA GTATGGATCTCCAGACTACATCAGGGGAGGGAAACTTTCATAGCCATCAA ATGCCTGACCAATCACAGCAGCAAAATTTCAAAACGAATGAACTACTCAG CTTCGCTTGCAGATCTTCTCTACCATTTTTGCTTTGGTAATAATTCAGCT TTTATAGCTGGAAAAAAGTACAGATTTTTGGGTGAAGGCTGGAAAAATGT ACATTTTCCAGCTGAAAATACCTGGTTTTGACCAAAAAAGCTGGATTTTT CATCTAAAACAAGCATGGCTACCCTGTTGAATGGGTGCTAAGCATGCAAT AATTGCTGCTTAACTAGTCTTAACTACTTTAATCGTAGAAATTTTAGCAA GACTAATTTTAGCGTATATTAGCGAGTCAAGAAAATCTTGATTTTTTTGG ATTTATTTTAGCGAATCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TCAGTTGCTCCTTGTTCTTAAACCAGTTTCAGGGTGTATATCAAACATAA CTTGAAAAACTCACATGAAAACTACCAATCAAAACTGATGGCTAAAGATA AAATTATTTATAGATTGTTTTTACACTTTATGCACAATACATTGTTTTTC ACGATTTAGGGTGACAAACAATTGGACTGTGCGTTGGATTTGATGAGAAG ATTACCCCCACAACAAATTGAAAAGAATTTAAGTGATTTAATTGACCTCG TAAGTATATGCTTTTAATTTCCAAGTTAAGTTCTAATTTGTTCTTGTTTT AGCCGAAATTGAGTGGTTTATTTTCTTAAATGGATTATCAGATTATTTTT TTATATTTGGCTTTTAGAGATACCTCTTTATGGTCCAAAGAAACACCTTA GTCTTTGACCTAATTATTTTCTAAAGCTGAGATATTCATAAGCGTTTTTA AGCTATTTTAGTGAAAATTTGTCGGTTCTAAGCTAAATATCAAAAAACTA TCTAGCGCTGTGATCTCTATCTTAGGATAGTGCCTATTCCCTGTGCTAAG GGAAGGTTTATCTCTCTTCTCTCTCTAATATCAAAAATCGTCTGATAATC TATTTAAAAATTTCTTACAAAAAGGATATTTCATTTTTGTGAATTTTTTA TGCTATGATACAATTTTATAATTCCTTCAGCGACCAGAATTATGTGAAGA CTTACTATCATCAGTTGATCAACCACTAAAAATTGCTCGTGACAAAGAAA CGGGGAAAGATTATTTGTTATGCGATTACAACAGAGATGGTGATTCATAC CGGTCACCATGGAGCAACACATACGACCCACCACTCGACGATGGTGCCCT GCCTTCAGATAGACTTCGTAAATTAGAGATAGATGCCAACGCTGCTTTTG ATCAATATAGAGAAATGTGAGTGATTTCTTTTTCGCACCAAGTGTTTTCG GAATCATCAATCAACAACTTTTTCACATGCTGTGGAGTTTGTAGACCTGG TGGTTTTAAAGTCTGTGAAAGCTATTTTTCTTGGGGCTCTTTAAGATTAC TTGGTATTTGCATTTTGAAGTAAAGCAAGATGTATATTTGATAATTTCGT TCCTCAGTCCAAAAGATATATCATATTTTGTATGAATTGAATTTTTTAAA GGTATTTTGAGGGTGGAGTATCATCTGTTTATTTATGGGATTTGGATCAT GGGTTTGCTGGCGTCATCTTGATCAAGAAAGGTATTGTCATGTTTATTTT TGATACAGTCTCTTACAATAACCTGAGAATGTCAGAAAGCAATATTGGTA GCTTTTCTGTTCAATAAGACTTGTTAACTACTTAATTAACTAATTGGTTT TAAATCAATTTGTGTTTGGTTTGGAAAAATCCAGGAAAATTTAAAAGAAC ACATCAATGACGGGGATTTTTAAGATGAATTGGAAAACACCTTTATAGAC TCTTCTCTAAAATTCTACACTTTCCATTTCATTTCCAGCTGGGGATGGAT CAAAGAAAATTCGTGGATGTTGGGATTCTATTCATGTGGTCGAGGTACAA GAGAAGAGTGGTGGAAGCAAGGCACACTATAAATTAACCTCCACTGCCAT GTTATGGCTCCAGGTACTGAGTTTATAGAAAATCGCACGATGGGTTAGTT TTTCTAACTTGGCGCCCCTTCAAAGAGAGCAATTAATCGTTGATTGTATT CTGTAGAGAGCAATTAATCGTTAATCACACTCTTCATTGAGGCGACTATG TTTACAAAATAGAGTTTAATATTTTTTTTTCGCTTTTTTTATCGAATGTT TTAATTTCATTCGAAATAGATATTCGAAAATTGCACTCTTTATTATGCAA TAACATATACTTAATGCACGATTTGTATGTACTGTAGAGGGGGGCGTACA GGGGTCGTGAAGAAAGAAATACCGACGCAATTCTTTTGAATCACCCTCAA CACTGGCAGCAAAAATTCGTTAAAAACAGCTAACACCTCCTTACTGTAGT CTTGTAATATAATTGTAATATAATGGTAAAACTGAACTGAAAAATTAAAT TTTTAAGTTTATCTTTTTTATAGACAAACAAAGCATCATCAGGGACGATG AACCTTGGTGGTAGTTTAACGAGACAGGTGTGAACATAATTACTTTATTC ATTTACTTTATCTTCACTGTAAGTGCACTCATTCCCAATTTTCTCTGTCT AAAACTATAGCACTTCTTGTAAATAAGCTTATTATAGTTACAAACTCGTC TCCAGTAGGAATAGTAAAAGCCATAATTATATGCATGTAAGGCAAAGTTT TTAATTTCTTCACACTTGAACATTACATCTAAGAGTAGACTGGGTGATTT TCTCTAAGCCTGATTTCCGATTTTGATCCAATGAGATAAGAGAACTGAAG AGCTGAAACTGTAACTTGCTCCACACACGGATCTATATGTGAAAACAAGA AGGCTGTTATTTTTAAAATAATAGCAGGATAGTGGTCACACAATCGTAAA TAAACTGCTATACTATAAAAACTACACAATTTGCTAGAAATGACTTTTTT TTGAAGTTTTTACTTTTTTAAATATCAACACAGCAGAACTTTTAAGTATA TCCGTGAGATGCATCTAGTGTAGTGAAGCTTTTAAAAAATGTCTTTTTTT ATACGTTTATCACTTTTACAGACTGAAATGGACAATGCAGTTAGCGACAG TAATCCTCATATTATCAACATTGGCCGTATGATTGAGGTTTGTCCATTTA ATTATCATAAATGGAACTTTTTATTCTCGCTTGTCCTTATAGATAGACTG GATGGCTTGATTCTGCTTAATTAATTACTTTAACGAACTCAGTGTCATAA AAATTATCAAAACGCAAAGTTTAGCCAGAAGTGGACTGTAGTCTTAACTT GTCCTAACATTTGATTTTCCTTTTGGCTTTAACACGATTAGCTCATAAAC TTGTTGATATACATCTTGACATACAACTTCATTTCTGTTTTGAAAATGTC ATTTTTATTTTCATTTATACCATGCTAGCTTTGACTAACTTCAACTCGTT TTCATTTAGGATATGGAAAATAAAATTCGTAACACTTTGAACGAAATTTA TTTTGGTAAGACAAGAGATATCGTCAACAGCGTTCGGTGAGTTTAGAAAA ACATTAAGTTATCCAAGATAGTAAATTTGAACTGGTTTCCATAATTGTTT CAAATATTATTGTTGTTCTTAGTATCTATCATCTGCTTCATGAGAAGCAT AGGAAATAAACAAAGAAAAGTTTACCTTAATAAGGATTTAAACTCTAGAG AAATCTTCCAAGTATAAATCTTCAAAAGGACAGAAACTCTAGAGCGCAAT CTTCTTGCAAGTAAATACATCTTCAAATTTATAAGAATACGAAATCTTAA TTTCTCGAAAAAATGTTTTTCTAGGTCCATCAACAATTTGGAGGACAAGA AGAAACAAAACAACCTCCAAGCTGAACTCTTCAAAAATCTGAAGGCTCGT CAAGAAAAATAGATTAATATCATCATCATCAACCATCTTCTATTTTTATA CAATGCCGAAAGAAGAAAAATGAGTTGTGAGCTAGTCTAGTTTCGTATGT TTTAAATTATAAAGAAAGGACCTTTGGTGTTTGGATAGCTTGGAATTAAA CTTTCTTTTTTCCTAATTTTCTCAAACATTTACATGGTTGTATTATTGTA TTGGTAAGAATATACAATAAATTAAAAAATCGACACGCAAAAAATATTTT GACATTTCAAATTGTAATTTTTTTAATTGTTTATTATCATTTGGTGAAAA CTGATTAATTTAAGAAGAATTTTTTTGATTATTTTTTTTTCCTTTGTAAT TTCTTCTTTTTTTTGTTTTTGTTTCTTTATATTGATTGCTGTAACATGTG ACTAGTTAAATTTTAAAATCTTACTTCAAAAATTTTGTCCATTTTGAATA GAGCTTAGAGCGAAAATTGATTTCATATTCTCAATCGAACTATCTAGACT TATTATGTCAAATCTACGCTAGTCTAAATATTTCCTATTGATAGAAAGGA CTTGAATTTTTGTTTGAATGTCATATTCAGGCAGTAGTACTATATTAGTA GCTTTATTATTGTTATAAAAATTTCAAATAAAAATTAAAACAGTTCAAAT TCATTCACTTATATATTTTAATGTTTTCACTTCTTTGCTTCGATGAGCAC AAAATATCTTTAATTTCAATCCAGCTAAATAGTTTTAGCACTTCCATTTA TATTAGGATAAACTTTCATTGTTTCATGGGATGCAAAAAAGTTGGCAAAT ATCTAAGAGTAATAAAAGTTAAGATCATTTGGCCTGTCTGACATATCTGT TGGAAAATTGGAAAAGTTAACAATCATGGAAACAGTCTTCTCATCTTCAG ATCATTACATTCTGGTCAGTCGCCATCTAGAAGTGCCTCTAATTTTTAAT GTAATTGTCATTATTATATTTTAGCATAAAATCTTTAAAAAATCTCGTAT ATATACATTTTCAAAGTGATCAATGATATGAAATATTCTTTTATTGTTTT ATACGCCAGCTGCCGTTACTTGGAAATGTCTTCCCTGCTTAGCATAAGCT TTTTGTACCATTTTTTCCATCTTGTTTATATCGGCTGACTTGTTTGTGTT TTAGAAAAGTTAAGAATGACATTTTCAAATTAGTGCAGTTGACGTTAATT ATTTTCAATACTTTGAGGTCAATTTAATTTACATACCGATCCCGAAAAGT TCAACTTTCTCTCAATGATAATCATAAAAATCTTCTATTTACAGTGTCAG TTAAACAAATAAACTAATGGGCCAATCAAATGACTGGAATTTATAATAAG AATGTGCACCTTACCTGCTAAGGTAAGTCAAGGAAGAATCCAACATTAAT TAGTTCCCTTTTATTTTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064440TCONS_00064440Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
F-actin capping protein subunit betaTCONS_00064440-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_415supercontigscaffold_415:10331..23800 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CAPZBPREDICTED: F-actin-capping protein subunit beta isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
150.71 158.75 195.64 209.74 156.56 123.72 139.39 146.18 120.13 120.19 92.96 84.34 76.41 72.44 97.18 98.82 108.85 99.96 72.75 81.92 88.16 89.21 81.47 81.28 67.1 73.59 106.08 82.17 118.08 97.02