TCONS_00064440 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064440
Unique NameTCONS_00064440
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2423

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064440 ID=TCONS_00064440|Name=TCONS_00064440|organism=Clytia hemisphaerica|type=transcript|length=2423bp
CACGCGCGTTACATAAGAACGATGAACAACGGATGGAAACGATTCAAACC
TGCCGATATTAGTTCATTCTAGCTAAAATGATCCAAGCTTGGGCGGACTA
GGCGGTAGTGGCCATTTTGTGGGAGAGGATTGCTCAAAACAGTAacaaaa
ctgaaactgaaatctactttacacttttttggaatttcttGGCAGTATGG
GTGACAAACAATTGGACTGTGCGTTGGATTTGATGAGAAGATTACCCCCA
CAACAAATTGAAAAGAATTTAAGTGATTTAATTGACCTCCGACCAGAATT
ATGTGAAGACTTACTATCATCAGTTGATCAACCACTAAAAATTGCTCGTG
ACAAAGAAACGGGGAAAGATTATTTGTTATGCGATTACAACAGAGATGGT
GATTCATACCGGTCACCATGGAGCAACACATACGACCCACCACTCGACGA
TGGTGCCCTGCCTTCAGATAGACTTCGTAAATTAGAGATAGATGCCAACG
CTGCTTTTGATCAATATAGAGAAATgtattttgAGGGTGGAGTATCATCT
GTTTATTTATGGGATTTGGATCATGGGTTTGCTGGCGTCATCTTGATCAA
GAAAGCTGGGGATGGATCAAAGAAAATTCGTGGATGTTGGGATTCTATTC
ATGTGGTCGAGGTACAAGAGAAGAGTGGTGGAAGCAAGGCACACTATAAA
TTAACCTCCACTGCCATGTTATGGCTCCAGACAAACAAAGCATCATCAGG
GACGATGAACCTTGGTGGTAGTTTAACGAGACAGACTGAAATGGACAATG
CAGTTAGCGACAGTAATCCTCATATTATCAACATTGGCCGTATGATTGAG
GATATGGAAAATAAAATTCGTAACACTTTGAacgaaatttattttggtaa
GACAAGAGATATCGTCAACAGCGTTCGgTCCATCAACAATTTGGAGGAca
agaagaaacaaaacaacCTCCAAGCTGAACTCTTCAAAAATCTGAAGGCT
CGTCAAGAAAAATAGAttaatatcatcatcatcaaccatCTTCTATTTTT
ATACAATGccgaaagaagaaaaatgagttGTGAGCTAGTCTAGTTTCGTA
TGTTTTAAATTATAAAGAAAGGACCTTTGGTGTTTGGATAGCTTGGAatt
aaactttcttttttcctaattttctcAAACATTTACATGGTTGTATTATT
GTATTGGTAAGAATAtacaataaattaaaaaatcgacacgcaaaaaatat
tttgacatttcaaattgtaatttttttaattgtttattATCATTTGGTGA
AAACTGATTAATttaagaagaatttttttgattatttttttttcctttgt
aatttcttcttttttttgtttttgtttctttatatTGATTGCTGTAACAT
GTGACtagttaaattttaaaatcttacttcaaaaattttgtccattttga
aTAGAGCTTAGAGCGAAAATTGATTTCATATTCTCAATCGAACTATCTAG
ACTTATTATGTCAAATCTACGCTAGTCTAAATATTTCCTATTGATAGAAA
GGActtgaatttttgtttgaatGTCATATTCAGGCAGTAGTACTATATTA
GTAGCTTTATTATtgttataaaaatttcaaataaaaattaaaacagttCA
AATTCATTCACTTAtatattttaatgttttcacTTCTTTGCTTCGATGAG
CACAAAATATCTTTAATTTCAATCCAGCTAAATAGTTTTAGCACTTCCAT
TTATATTAGGATAAACTTTCATTGTTTCATGGGATGCAAAAAAGTTGGCA
AATATCTAAGAGTAATAAAAGTTAAGATCATTTGGCCTGTCTGACATATC
tgttggaaaattggaaaagttAACAATCATGGAAACAGTCTTCTCATCTT
CAGATCATTACATTCTGGTCAGTCGCCATCTAGAAGTGCCTCTAATTTTT
AATGTAATTGTCATtattatattttagcataaaatctttaaaaaatctcG
TATATATACATTTTCAAAGTGATCAATGAtatgaaatattcttttattgt
tttatacGCCAGCTGCCGTTACTTGGAAATGTCTTCCCTGCTTAGCATAA
GCTTTTTGTACCATTTTTTCCATCTTGTTTATATCGGCTGACTTGTTTGT
GTTTTAGAAAAGTTAAGAATGACATTTTCAAATTAGTGCAGTTGACGtta
attattttcaatactttGAGGTCAATTTAATTTACATACCGATCCCGAAA
AGTTCAACTTTCTCTCAATGATAATCATAAAAATCTTCTATTTACAGTGT
CAGTTAAACAAATAAACTAATGGGCCAATCAAATGACTGGAATTTATAAT
AAGAATGTGCACCTTACCTGCTAAGGTAAGTCAAGGAAGAATCCAACATT
AATTAGTTCccttttattttaag
Run BLAST on NCBI

protein sequence of F-actin capping protein subunit beta

>TCONS_00064440-protein ID=TCONS_00064440-protein|Name=F-actin capping protein subunit beta|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
MGDKQLDCALDLMRRLPPQQIEKNLSDLIDLRPELCEDLLSSVDQPLKIA
RDKETGKDYLLCDYNRDGDSYRSPWSNTYDPPLDDGALPSDRLRKLEIDA
NAAFDQYREMYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIRGCWDS
IHVVEVQEKSGGSKAHYKLTSTAMLWLQTNKASSGTMNLGGSLTRQTEMD
NAVSDSNPHIINIGRMIEDMENKIRNTLNEIYFGKTRDIVNSVRSINNLE
DKKKQNNLQAELFKNLKARQEK
Run BLAST on NCBI

transcript from alignment at scaffold_415:10331..23800-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064440 ID=TCONS_00064440|Name=TCONS_00064440|organism=Clytia hemisphaerica|type=transcript|length=13470bp|location=Sequence derived from alignment at scaffold_415:10331..23800- (Clytia hemisphaerica)
CACGCGCGTTACATAAGAACGATGAACAACGGATGGAAACGATTCAAACC TGCCGATATTAGTTCATTCTAGCTAAAATGATCCAAGCTTGGGCGGACTA GGCGGTAGTGGCCATTTTGTGGGAGAGGATTGCTCAAAACAGTAACAAAA CTGAAACTGAAATCTACTTTACACTTTTTTGGAATTTCTTGGCAGTATGG TAAGACTATTTATTCTGATCTTTTACCACTAAAAATGTTTTCGTCAATCT CCTCCGGTACCTCAAAATTTATGTTGTTTGTGTTGTTTTTTTTATATTTA CATTTCAACATTTTTTTTGAAAAGCTGTCATTAACAGTTGTGTTTAACTG TAATATACTAAGACTTTAAGGTATATCTTTAGTATAGTAAGACAACACAG TGTTTTAGCATTCAAATTCATTTACATAACCTTATAAAGGAGTCCCTCGC GTTAGGAAATTTTCAGTATTTTATGTCCGTCTATCCCGTCCACCCCCATC CCATGACATGTATGATCGATATGATGGACATATAAAAAATATTGAAGGGC ATTTTTATGATTCTGCCAACTCTTTAGACTTTCCTGTATTTTTGTCTCAT GCTAAAAAGTATTCAGTCTAGGAAATCCTTTTATTGCGCGCTTAAACTTC CGAGATTTAAATGTGCAATTACATGGTCAAAACTATCAAAACTATTACAT ACTATCAAAATTGCAGAGTTTTTTAAGGGTGCCACGCATACCATGAGCAT ATATGTCAGCCTGAAATAATTTTCAAGTTGTCGTTTATTATCTGTTTAAA AAGGTTTGGTAGAGGTCAAGTAAAAAAAGACGTTCCACGGCTTGCTAATT CCACTACTTCCAAAATCTGAACAATTTTTACAAAATTTCTGAAATTTCAC TAAGAACTTGGCTGGAGGTGAATTATAAGCAGTGGCATGGTGGGAAAATT TCTCTGGGGTGGCCAAGGCAATTTATATGGCGCCCTTTTTAAAGATTTTT TGTTTTTGGCGCCTCTCTTTATACGCTCATTATGAACACAAAAAAGGGAG TGTGCGAGCGAAGCGAGCCAGAAAATTTTGAGTTTTTGAGGTGATGAGGG GCGCCATTTTTGTTTTTTCATTTGTCAATCTTTCGATATGGGCGCCTGAA AAATCCTTCTTGGCGTTGCTTATTTTTGGGCGCCCCTTCTAAAAAGGGCT CCGCTGGGGGGGCCTGGGCCCCCCTGCCACCACGCCACTGATTATAAGCA TGATTCATAAGCATATAATAAGCATAAACTATGCCTGGATGCTTTCAGAA TTTTTAAGCATACACAAGCCTGACCAAGGGGCATACACTTGCTTATAAAA AAAACATGTAGTGGCAAAACAATGCAGGGTGTTCAACGTCACTCGCGCGA CAAGTTACACATTCGTTCTTTGTTAATCGTATCGGGCGATAGGTGGTTAG GCGGCAGGTGGTTAGGCGGCAGGTGCCTGGTATTTTACCCAAACCTGTTC GGGATAGTAATAAATACCAACCAATACATGGACATGTAATTGCGTACCAG GACTCATTTATCCCAGCATCTATTAACTGGTGGAATAAATTGCCAGCTAA CATTTTGAATATGGAAGATAGGAATGACTCCACGTATCTTGGCATTCTCA GAACATTTTGTTTAGCCTTATGCTCGTTACTCTTAATCTCGATAACCTAG GCTTTGTCCTCAACCAAACATACTTTAGGTTGTTTTTTTTTAGAATTTTT AACATATTTATTATTGTTATTGAATAAACATACAAACATTTTTTATTATT AAACCAATTTCATTTATCTTATTTTTGTTAATGCTTTTATATGTAGGGAA AACAAACATTTATGTTGTTAACTACTGAAATACATAGATAGATAGGTGTT CTCTAATTCTCCAATCGGTGTCCGGTCATTTTGAATGAAAAAAAAAAAGT TAAAAAGGGCAAGCTATCATTGAAAGTTATCGTGACATGTTTTATGACAG AAAGTATGATTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTT AACAGTAAGTGAAAATACAGGCCAGATTGTCTCATCTCAAGATATTAACC CTTGAAAACCGTGTTTTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTTG CGCTTTTTGAAGCTCAATATCTCGAGTTAGGTACTGAAATCACCTATACT TGCAATTTATCTCTAATCCTAATTTTTTGAGAGCTTTCCAAAAATATACA ACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATCTTTAACCCTAT GATTTTTGGCTGAGACCGTCATATTTGCCCGAAAATCACACCAAAGTGTC CGGAAAAAAAATTGGAAACATCGTAATTTCGATTCCCCTACCCCTTAGCT TTCCAAAAATGTATAGCAAGGGCTTATAACAAAACAATCGAGCGATTTAA AAAAATCGAACAAAATTTCCCCTACTATGGGTTTCATCGCTATTTAAGTG GTCAAAGAAAAGTTTCAGAGATTCTTCACCGTGCTGCCAGAGAAAGAAGA TGTCATCGATATATCTCCACCAGACTAAAGGTTTGAGATTGTGTGGAATC TTTTCTTCAAGATCACTCATAAAGAGAATGGCATAGTTTGGTGCCATTTT AGTACCAATTGCTGTACCTTGCTTTTGTTTAAAAACCTCGCTGTTGTGTT CAAAGATGTTATTTTCTAGAACACATTTCGAAAGCTCCAAAAGACTGCTG GTAGAGATTGTTTTTTCATCCCTACTATCAAAAGCATGCCGCAGAGATTC TAGACCATCCTCATGGGGGGTACTAGGATAGAGACCAACTACGTCTGCGG TGCGGGCGATTTGCGCTAAATCTGTACCGTGTCCCGTCCGAAATCATGAA AAATAAAGTTCATTTTTTAAACATAACTCTACTTTTCTATGACAGTCTAT AGCCTATATTTCATGGAAATGTACCTTGACACCACCTTTTAAGGCCTAAT AATAAAGATATAGGGGCTCGTGGAGCTGTTAGAGCGTATGAAAATGGTAA ATTTGTTGTAAAAAAAATCAAAACTAACTTGCACTTTNGGAAAATCAAAA TTCCAGGTCAAATACCTTCCTGGAAAGAAAGTGCTACAATAAAACTGAAG CACTTTTTTGCTAAAAATTGCCAAAACGAGAAAAAATTGACACAAAATTT ATGATTGCATACTAATGATAGACAGTTAAAACATGAAATTTTGCAGAAAG TGTACCATTACCAAGCTGTATCTGATGAAAAAAGAAAAAAATCATTAACA CTTTTAAAACCTTAATGAGATATATGCAAAAAATGATTTCGGACGGGACG GTACAGATTTAGTGCAAATCGGCCAGTGCATAAAATGGTATCAGATGGTA AATTAGGAAGAGAGGAAAGCTTTTTCAAAAAATCATTTGTGTCTTTAACA AATGATTTGACCTGTTTAGCNAGTAAGGAAGCTGTAGAACAGCCTGAAAT TGTTTGTATAAAGGCCTTCCTCAAATTAGAATACATCTTAAAAATCTGTA TCACCTTTTTCATTTTTTTTCAGGGTGATTTGCACTAAATCTTTCCTGTC CCGTCCGAAATCATTTTCATAAAAATCTGTTTATTTCAAGTTTTGCTAAA CTTTTTCTTTCTACATATTATCAGTANACCTGTTTAGGTAGAGGCTTTAG ATGAAAATCAAGAAATGCCGAAATATTCTCCGTATAATACGAAGAATTTG AAATAACAGGTCTCCCGGGAACCCTGTAAAGTTGTTTGTGGATTTTTGGT AATAAATAAAAACGACCAATCTTAGGGTTTTCAACCAGAAAATAATCCAA AGTATCTCTAGGAATGTCACCTCTTTTATCAACAGAGTCAATGCAAGACT CGACAAACTCAATGAGCGGACTAACAGCATCCCCACTGAGCTTCTCATAC ACACTCTCATCTGCGACTCAGCTTCCCTAAGATAATCCTCCCAATCCCAA ACCACAATACACGAGCCCTTGTCAGCCCCCTTGATGATAATTGAAGTGTC ATTCCGTAGAGAATCAATAGCTATCCTTTCCTCCTTAGAAATATTGTGTT CCCTTATTCTAGTGTTAAGATTAAGAATTTCTTCTTCCAAACAACTAAGA TACATCTCAATAGCTGCATCTTGGTTTCTTGGGTTAAAATTCTTAGACCG GTTCGATTTCTTTTTAAACTGATCCGGCACAAAATCACGTTCGTCGTTTT GAAAAAACCACTTCAACCAAAGCTTCCTCCCAAAGCGCTCAAGATCGTTT TTAAGAGCAGCTTTGTCAACAAAACGACTTTCATAAGATGTTATCTAGTA TTAGTTTAGCCTTTTTCAGTTTAGCCCATCTGACATTCTTTTGTCATAAA AGTTTTATGAGCTTAGATCTGTATGATCGCTTTAAAAGAAATGTCTTTTG AAAATCTAGAAGTACCAGTAGATACCCCTTAGAACCTACAAAGTTGCACT TTGGCTCTCTTACAGTAGCCACCAAACTTAATTTAATATTGTTTAGTTTA CTTTTTTAAAACCTCTTATAAATGTACTTGTACATAAAATACCGTGAGAT CGGGTAACTTGCATCAGTAGTTAGGAGACCCGTCTACTCTATCGTTGTGT GATTTCAAAGTATATCATTTAGTTAAAACAAATAATAATATAGAAATAGT AGTCGGGTATTTTTGTAGATGCCAAATCTGGTCGCAGAATTCTATTGGCT GTTAAACAATTGTTGAAATCACATGATATATTGTTTTGATTGGAAGTGCG TGAACCTGCTTGGCTAACCTTATCAACAGCTTTTTTGGCACAAAATTCAA ACCAAATGTAAACAAATTCAAACTGGGTCAAAAATACCATATTCTCAATG AGTAGCTTATGATGGGATTTTTGCTTATGTGGTGTAAGTTTGAATAGAAA GTATGGATCTCCAGACTACATCAGGGGAGGGAAACTTTCATAGCCATCAA ATGCCTGACCAATCACAGCAGCAAAATTTCAAAACGAATGAACTACTCAG CTTCGCTTGCAGATCTTCTCTACCATTTTTGCTTTGGTAATAATTCAGCT TTTATAGCTGGAAAAAAGTACAGATTTTTGGGTGAAGGCTGGAAAAATGT ACATTTTCCAGCTGAAAATACCTGGTTTTGACCAAAAAAGCTGGATTTTT CATCTAAAACAAGCATGGCTACCCTGTTGAATGGGTGCTAAGCATGCAAT AATTGCTGCTTAACTAGTCTTAACTACTTTAATCGTAGAAATTTTAGCAA GACTAATTTTAGCGTATATTAGCGAGTCAAGAAAATCTTGATTTTTTTGG ATTTATTTTAGCGAATCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TCAGTTGCTCCTTGTTCTTAAACCAGTTTCAGGGTGTATATCAAACATAA CTTGAAAAACTCACATGAAAACTACCAATCAAAACTGATGGCTAAAGATA AAATTATTTATAGATTGTTTTTACACTTTATGCACAATACATTGTTTTTC ACGATTTAGGGTGACAAACAATTGGACTGTGCGTTGGATTTGATGAGAAG ATTACCCCCACAACAAATTGAAAAGAATTTAAGTGATTTAATTGACCTCG TAAGTATATGCTTTTAATTTCCAAGTTAAGTTCTAATTTGTTCTTGTTTT AGCCGAAATTGAGTGGTTTATTTTCTTAAATGGATTATCAGATTATTTTT TTATATTTGGCTTTTAGAGATACCTCTTTATGGTCCAAAGAAACACCTTA GTCTTTGACCTAATTATTTTCTAAAGCTGAGATATTCATAAGCGTTTTTA AGCTATTTTAGTGAAAATTTGTCGGTTCTAAGCTAAATATCAAAAAACTA TCTAGCGCTGTGATCTCTATCTTAGGATAGTGCCTATTCCCTGTGCTAAG GGAAGGTTTATCTCTCTTCTCTCTCTAATATCAAAAATCGTCTGATAATC TATTTAAAAATTTCTTACAAAAAGGATATTTCATTTTTGTGAATTTTTTA TGCTATGATACAATTTTATAATTCCTTCAGCGACCAGAATTATGTGAAGA CTTACTATCATCAGTTGATCAACCACTAAAAATTGCTCGTGACAAAGAAA CGGGGAAAGATTATTTGTTATGCGATTACAACAGAGATGGTGATTCATAC CGGTCACCATGGAGCAACACATACGACCCACCACTCGACGATGGTGCCCT GCCTTCAGATAGACTTCGTAAATTAGAGATAGATGCCAACGCTGCTTTTG ATCAATATAGAGAAATGTGAGTGATTTCTTTTTCGCACCAAGTGTTTTCG GAATCATCAATCAACAACTTTTTCACATGCTGTGGAGTTTGTAGACCTGG TGGTTTTAAAGTCTGTGAAAGCTATTTTTCTTGGGGCTCTTTAAGATTAC TTGGTATTTGCATTTTGAAGTAAAGCAAGATGTATATTTGATAATTTCGT TCCTCAGTCCAAAAGATATATCATATTTTGTATGAATTGAATTTTTTAAA GGTATTTTGAGGGTGGAGTATCATCTGTTTATTTATGGGATTTGGATCAT GGGTTTGCTGGCGTCATCTTGATCAAGAAAGGTATTGTCATGTTTATTTT TGATACAGTCTCTTACAATAACCTGAGAATGTCAGAAAGCAATATTGGTA GCTTTTCTGTTCAATAAGACTTGTTAACTACTTAATTAACTAATTGGTTT TAAATCAATTTGTGTTTGGTTTGGAAAAATCCAGGAAAATTTAAAAGAAC ACATCAATGACGGGGATTTTTAAGATGAATTGGAAAACACCTTTATAGAC TCTTCTCTAAAATTCTACACTTTCCATTTCATTTCCAGCTGGGGATGGAT CAAAGAAAATTCGTGGATGTTGGGATTCTATTCATGTGGTCGAGGTACAA GAGAAGAGTGGTGGAAGCAAGGCACACTATAAATTAACCTCCACTGCCAT GTTATGGCTCCAGGTACTGAGTTTATAGAAAATCGCACGATGGGTTAGTT TTTCTAACTTGGCGCCCCTTCAAAGAGAGCAATTAATCGTTGATTGTATT CTGTAGAGAGCAATTAATCGTTAATCACACTCTTCATTGAGGCGACTATG TTTACAAAATAGAGTTTAATATTTTTTTTTCGCTTTTTTTATCGAATGTT TTAATTTCATTCGAAATAGATATTCGAAAATTGCACTCTTTATTATGCAA TAACATATACTTAATGCACGATTTGTATGTACTGTAGAGGGGGGCGTACA GGGGTCGTGAAGAAAGAAATACCGACGCAATTCTTTTGAATCACCCTCAA CACTGGCAGCAAAAATTCGTTAAAAACAGCTAACACCTCCTTACTGTAGT CTTGTAATATAATTGTAATATAATGGTAAAACTGAACTGAAAAATTAAAT TTTTAAGTTTATCTTTTTTATAGACAAACAAAGCATCATCAGGGACGATG AACCTTGGTGGTAGTTTAACGAGACAGGTGTGAACATAATTACTTTATTC ATTTACTTTATCTTCACTGTAAGTGCACTCATTCCCAATTTTCTCTGTCT AAAACTATAGCACTTCTTGTAAATAAGCTTATTATAGTTACAAACTCGTC TCCAGTAGGAATAGTAAAAGCCATAATTATATGCATGTAAGGCAAAGTTT TTAATTTCTTCACACTTGAACATTACATCTAAGAGTAGACTGGGTGATTT TCTCTAAGCCTGATTTCCGATTTTGATCCAATGAGATAAGAGAACTGAAG AGCTGAAACTGTAACTTGCTCCACACACGGATCTATATGTGAAAACAAGA AGGCTGTTATTTTTAAAATAATAGCAGGATAGTGGTCACACAATCGTAAA TAAACTGCTATACTATAAAAACTACACAATTTGCTAGAAATGACTTTTTT TTGAAGTTTTTACTTTTTTAAATATCAACACAGCAGAACTTTTAAGTATA TCCGTGAGATGCATCTAGTGTAGTGAAGCTTTTAAAAAATGTCTTTTTTT ATACGTTTATCACTTTTACAGACTGAAATGGACAATGCAGTTAGCGACAG TAATCCTCATATTATCAACATTGGCCGTATGATTGAGGTTTGTCCATTTA ATTATCATAAATGGAACTTTTTATTCTCGCTTGTCCTTATAGATAGACTG GATGGCTTGATTCTGCTTAATTAATTACTTTAACGAACTCAGTGTCATAA AAATTATCAAAACGCAAAGTTTAGCCAGAAGTGGACTGTAGTCTTAACTT GTCCTAACATTTGATTTTCCTTTTGGCTTTAACACGATTAGCTCATAAAC TTGTTGATATACATCTTGACATACAACTTCATTTCTGTTTTGAAAATGTC ATTTTTATTTTCATTTATACCATGCTAGCTTTGACTAACTTCAACTCGTT TTCATTTAGGATATGGAAAATAAAATTCGTAACACTTTGAACGAAATTTA TTTTGGTAAGACAAGAGATATCGTCAACAGCGTTCGGTGAGTTTAGAAAA ACATTAAGTTATCCAAGATAGTAAATTTGAACTGGTTTCCATAATTGTTT CAAATATTATTGTTGTTCTTAGTATCTATCATCTGCTTCATGAGAAGCAT AGGAAATAAACAAAGAAAAGTTTACCTTAATAAGGATTTAAACTCTAGAG AAATCTTCCAAGTATAAATCTTCAAAAGGACAGAAACTCTAGAGCGCAAT CTTCTTGCAAGTAAATACATCTTCAAATTTATAAGAATACGAAATCTTAA TTTCTCGAAAAAATGTTTTTCTAGGTCCATCAACAATTTGGAGGACAAGA AGAAACAAAACAACCTCCAAGCTGAACTCTTCAAAAATCTGAAGGCTCGT CAAGAAAAATAGATTAATATCATCATCATCAACCATCTTCTATTTTTATA CAATGCCGAAAGAAGAAAAATGAGTTGTGAGCTAGTCTAGTTTCGTATGT TTTAAATTATAAAGAAAGGACCTTTGGTGTTTGGATAGCTTGGAATTAAA CTTTCTTTTTTCCTAATTTTCTCAAACATTTACATGGTTGTATTATTGTA TTGGTAAGAATATACAATAAATTAAAAAATCGACACGCAAAAAATATTTT GACATTTCAAATTGTAATTTTTTTAATTGTTTATTATCATTTGGTGAAAA CTGATTAATTTAAGAAGAATTTTTTTGATTATTTTTTTTTCCTTTGTAAT TTCTTCTTTTTTTTGTTTTTGTTTCTTTATATTGATTGCTGTAACATGTG ACTAGTTAAATTTTAAAATCTTACTTCAAAAATTTTGTCCATTTTGAATA GAGCTTAGAGCGAAAATTGATTTCATATTCTCAATCGAACTATCTAGACT TATTATGTCAAATCTACGCTAGTCTAAATATTTCCTATTGATAGAAAGGA CTTGAATTTTTGTTTGAATGTCATATTCAGGCAGTAGTACTATATTAGTA GCTTTATTATTGTTATAAAAATTTCAAATAAAAATTAAAACAGTTCAAAT TCATTCACTTATATATTTTAATGTTTTCACTTCTTTGCTTCGATGAGCAC AAAATATCTTTAATTTCAATCCAGCTAAATAGTTTTAGCACTTCCATTTA TATTAGGATAAACTTTCATTGTTTCATGGGATGCAAAAAAGTTGGCAAAT ATCTAAGAGTAATAAAAGTTAAGATCATTTGGCCTGTCTGACATATCTGT TGGAAAATTGGAAAAGTTAACAATCATGGAAACAGTCTTCTCATCTTCAG ATCATTACATTCTGGTCAGTCGCCATCTAGAAGTGCCTCTAATTTTTAAT GTAATTGTCATTATTATATTTTAGCATAAAATCTTTAAAAAATCTCGTAT ATATACATTTTCAAAGTGATCAATGATATGAAATATTCTTTTATTGTTTT ATACGCCAGCTGCCGTTACTTGGAAATGTCTTCCCTGCTTAGCATAAGCT TTTTGTACCATTTTTTCCATCTTGTTTATATCGGCTGACTTGTTTGTGTT TTAGAAAAGTTAAGAATGACATTTTCAAATTAGTGCAGTTGACGTTAATT ATTTTCAATACTTTGAGGTCAATTTAATTTACATACCGATCCCGAAAAGT TCAACTTTCTCTCAATGATAATCATAAAAATCTTCTATTTACAGTGTCAG TTAAACAAATAAACTAATGGGCCAATCAAATGACTGGAATTTATAATAAG AATGTGCACCTTACCTGCTAAGGTAAGTCAAGGAAGAATCCAACATTAAT TAGTTCCCTTTTATTTTAAG

Coding sequence (CDS) from alignment at scaffold_415:10331..23800-

>TCONS_00064440 ID=TCONS_00064440|Name=TCONS_00064440|organism=Clytia hemisphaerica|type=CDS|length=7371bp|location=Sequence derived from alignment at scaffold_415:10331..23800- (Clytia hemisphaerica)
GTCCATCAACAATTTGGAGGACAAGAAGAAACAAAACAACCTCCAAGCTG
AACTCTTCAAAAATCTGAAGGCTCGTCAAGAAAAATAGGATATGGAAAAT
AAAATTCGTAACACTTTGAACGAAATTTATTTTGGTAAGACAAGAGATAT
CGTCAACAGCGTTCGACTGAAATGGACAATGCAGTTAGCGACAGTAATCC
TCATATTATCAACATTGGCCGTATGATTGAGACAAACAAAGCATCATCAG
GGACGATGAACCTTGGTGGTAGTTTAACGAGACAGCTGGGGATGGATCAA
AGAAAATTCGTGGATGTTGGGATTCTATTCATGTGGTCGAGGTACAAGAG
AAGAGTGGTGGAAGCAAGGCACACTATAAATTAACCTCCACTGCCATGTT
ATGGCTCCAGGTATTTTGAGGGTGGAGTATCATCTGTTTATTTATGGGAT
TTGGATCATGGGTTTGCTGGCGTCATCTTGATCAAGAAAGCGACCAGAAT
TATGTGAAGACTTACTATCATCAGTTGATCAACCACTAAAAATTGCTCGT
GACAAAGAAACGGGGAAAGATTATTTGTTATGCGATTACAACAGAGATGG
TGATTCATACCGGTCACCATGGAGCAACACATACGACCCACCACTCGACG
ATGGTGCCCTGCCTTCAGATAGACTTCGTAAATTAGAGATAGATGCCAAC
GCTGCTTTTGATCAATATAGAGAAATGGTGACAAACAATTGGACTGTGCG
TTGGATTTGATGAGAAGATTACCCCCACAACAAATTGAAAAGAATTTAAG
TGATTTAATTGACCTCATGGTCCATCAACAATTTGGAGGACAAGAAGAAA
CAAAACAACCTCCAAGCTGAACTCTTCAAAAATCTGAAGGCTCGTCAAGA
AAAATAGGATATGGAAAATAAAATTCGTAACACTTTGAACGAAATTTATT
TTGGTAAGACAAGAGATATCGTCAACAGCGTTCGACTGAAATGGACAATG
CAGTTAGCGACAGTAATCCTCATATTATCAACATTGGCCGTATGATTGAG
ACAAACAAAGCATCATCAGGGACGATGAACCTTGGTGGTAGTTTAACGAG
ACAGCTGGGGATGGATCAAAGAAAATTCGTGGATGTTGGGATTCTATTCA
TGTGGTCGAGGTACAAGAGAAGAGTGGTGGAAGCAAGGCACACTATAAAT
TAACCTCCACTGCCATGTTATGGCTCCAGGTATTTTGAGGGTGGAGTATC
ATCTGTTTATTTATGGGATTTGGATCATGGGTTTGCTGGCGTCATCTTGA
TCAAGAAAGCGACCAGAATTATGTGAAGACTTACTATCATCAGTTGATCA
ACCACTAAAAATTGCTCGTGACAAAGAAACGGGGAAAGATTATTTGTTAT
GCGATTACAACAGAGATGGTGATTCATACCGGTCACCATGGAGCAACACA
TACGACCCACCACTCGACGATGGTGCCCTGCCTTCAGATAGACTTCGTAA
ATTAGAGATAGATGCCAACGCTGCTTTTGATCAATATAGAGAAATGGTGA
CAAACAATTGGACTGTGCGTTGGATTTGATGAGAAGATTACCCCCACAAC
AAATTGAAAAGAATTTAAGTGATTTAATTGACCTCATGGTCCATCAACAA
TTTGGAGGACAAGAAGAAACAAAACAACCTCCAAGCTGAACTCTTCAAAA
ATCTGAAGGCTCGTCAAGAAAAATAGGATATGGAAAATAAAATTCGTAAC
ACTTTGAACGAAATTTATTTTGGTAAGACAAGAGATATCGTCAACAGCGT
TCGACTGAAATGGACAATGCAGTTAGCGACAGTAATCCTCATATTATCAA
CATTGGCCGTATGATTGAGACAAACAAAGCATCATCAGGGACGATGAACC
TTGGTGGTAGTTTAACGAGACAGCTGGGGATGGATCAAAGAAAATTCGTG
GATGTTGGGATTCTATTCATGTGGTCGAGGTACAAGAGAAGAGTGGTGGA
AGCAAGGCACACTATAAATTAACCTCCACTGCCATGTTATGGCTCCAGGT
ATTTTGAGGGTGGAGTATCATCTGTTTATTTATGGGATTTGGATCATGGG
TTTGCTGGCGTCATCTTGATCAAGAAAGCGACCAGAATTATGTGAAGACT
TACTATCATCAGTTGATCAACCACTAAAAATTGCTCGTGACAAAGAAACG
GGGAAAGATTATTTGTTATGCGATTACAACAGAGATGGTGATTCATACCG
GTCACCATGGAGCAACACATACGACCCACCACTCGACGATGGTGCCCTGC
CTTCAGATAGACTTCGTAAATTAGAGATAGATGCCAACGCTGCTTTTGAT
CAATATAGAGAAATGGTGACAAACAATTGGACTGTGCGTTGGATTTGATG
AGAAGATTACCCCCACAACAAATTGAAAAGAATTTAAGTGATTTAATTGA
CCTCATGGTCCATCAACAATTTGGAGGACAAGAAGAAACAAAACAACCTC
CAAGCTGAACTCTTCAAAAATCTGAAGGCTCGTCAAGAAAAATAGGATAT
GGAAAATAAAATTCGTAACACTTTGAACGAAATTTATTTTGGTAAGACAA
GAGATATCGTCAACAGCGTTCGACTGAAATGGACAATGCAGTTAGCGACA
GTAATCCTCATATTATCAACATTGGCCGTATGATTGAGACAAACAAAGCA
TCATCAGGGACGATGAACCTTGGTGGTAGTTTAACGAGACAGCTGGGGAT
GGATCAAAGAAAATTCGTGGATGTTGGGATTCTATTCATGTGGTCGAGGT
ACAAGAGAAGAGTGGTGGAAGCAAGGCACACTATAAATTAACCTCCACTG
CCATGTTATGGCTCCAGGTATTTTGAGGGTGGAGTATCATCTGTTTATTT
ATGGGATTTGGATCATGGGTTTGCTGGCGTCATCTTGATCAAGAAAGCGA
CCAGAATTATGTGAAGACTTACTATCATCAGTTGATCAACCACTAAAAAT
TGCTCGTGACAAAGAAACGGGGAAAGATTATTTGTTATGCGATTACAACA
GAGATGGTGATTCATACCGGTCACCATGGAGCAACACATACGACCCACCA
CTCGACGATGGTGCCCTGCCTTCAGATAGACTTCGTAAATTAGAGATAGA
TGCCAACGCTGCTTTTGATCAATATAGAGAAATGGTGACAAACAATTGGA
CTGTGCGTTGGATTTGATGAGAAGATTACCCCCACAACAAATTGAAAAGA
ATTTAAGTGATTTAATTGACCTCATGGTCCATCAACAATTTGGAGGACAA
GAAGAAACAAAACAACCTCCAAGCTGAACTCTTCAAAAATCTGAAGGCTC
GTCAAGAAAAATAGGATATGGAAAATAAAATTCGTAACACTTTGAACGAA
ATTTATTTTGGTAAGACAAGAGATATCGTCAACAGCGTTCGACTGAAATG
GACAATGCAGTTAGCGACAGTAATCCTCATATTATCAACATTGGCCGTAT
GATTGAGACAAACAAAGCATCATCAGGGACGATGAACCTTGGTGGTAGTT
TAACGAGACAGCTGGGGATGGATCAAAGAAAATTCGTGGATGTTGGGATT
CTATTCATGTGGTCGAGGTACAAGAGAAGAGTGGTGGAAGCAAGGCACAC
TATAAATTAACCTCCACTGCCATGTTATGGCTCCAGGTATTTTGAGGGTG
GAGTATCATCTGTTTATTTATGGGATTTGGATCATGGGTTTGCTGGCGTC
ATCTTGATCAAGAAAGCGACCAGAATTATGTGAAGACTTACTATCATCAG
TTGATCAACCACTAAAAATTGCTCGTGACAAAGAAACGGGGAAAGATTAT
TTGTTATGCGATTACAACAGAGATGGTGATTCATACCGGTCACCATGGAG
CAACACATACGACCCACCACTCGACGATGGTGCCCTGCCTTCAGATAGAC
TTCGTAAATTAGAGATAGATGCCAACGCTGCTTTTGATCAATATAGAGAA
ATGGTGACAAACAATTGGACTGTGCGTTGGATTTGATGAGAAGATTACCC
CCACAACAAATTGAAAAGAATTTAAGTGATTTAATTGACCTCATGGTCCA
TCAACAATTTGGAGGACAAGAAGAAACAAAACAACCTCCAAGCTGAACTC
TTCAAAAATCTGAAGGCTCGTCAAGAAAAATAGGATATGGAAAATAAAAT
TCGTAACACTTTGAACGAAATTTATTTTGGTAAGACAAGAGATATCGTCA
ACAGCGTTCGACTGAAATGGACAATGCAGTTAGCGACAGTAATCCTCATA
TTATCAACATTGGCCGTATGATTGAGACAAACAAAGCATCATCAGGGACG
ATGAACCTTGGTGGTAGTTTAACGAGACAGCTGGGGATGGATCAAAGAAA
ATTCGTGGATGTTGGGATTCTATTCATGTGGTCGAGGTACAAGAGAAGAG
TGGTGGAAGCAAGGCACACTATAAATTAACCTCCACTGCCATGTTATGGC
TCCAGGTATTTTGAGGGTGGAGTATCATCTGTTTATTTATGGGATTTGGA
TCATGGGTTTGCTGGCGTCATCTTGATCAAGAAAGCGACCAGAATTATGT
GAAGACTTACTATCATCAGTTGATCAACCACTAAAAATTGCTCGTGACAA
AGAAACGGGGAAAGATTATTTGTTATGCGATTACAACAGAGATGGTGATT
CATACCGGTCACCATGGAGCAACACATACGACCCACCACTCGACGATGGT
GCCCTGCCTTCAGATAGACTTCGTAAATTAGAGATAGATGCCAACGCTGC
TTTTGATCAATATAGAGAAATGGTGACAAACAATTGGACTGTGCGTTGGA
TTTGATGAGAAGATTACCCCCACAACAAATTGAAAAGAATTTAAGTGATT
TAATTGACCTCATGGTCCATCAACAATTTGGAGGACAAGAAGAAACAAAA
CAACCTCCAAGCTGAACTCTTCAAAAATCTGAAGGCTCGTCAAGAAAAAT
AGGATATGGAAAATAAAATTCGTAACACTTTGAACGAAATTTATTTTGGT
AAGACAAGAGATATCGTCAACAGCGTTCGACTGAAATGGACAATGCAGTT
AGCGACAGTAATCCTCATATTATCAACATTGGCCGTATGATTGAGACAAA
CAAAGCATCATCAGGGACGATGAACCTTGGTGGTAGTTTAACGAGACAGC
TGGGGATGGATCAAAGAAAATTCGTGGATGTTGGGATTCTATTCATGTGG
TCGAGGTACAAGAGAAGAGTGGTGGAAGCAAGGCACACTATAAATTAACC
TCCACTGCCATGTTATGGCTCCAGGTATTTTGAGGGTGGAGTATCATCTG
TTTATTTATGGGATTTGGATCATGGGTTTGCTGGCGTCATCTTGATCAAG
AAAGCGACCAGAATTATGTGAAGACTTACTATCATCAGTTGATCAACCAC
TAAAAATTGCTCGTGACAAAGAAACGGGGAAAGATTATTTGTTATGCGAT
TACAACAGAGATGGTGATTCATACCGGTCACCATGGAGCAACACATACGA
CCCACCACTCGACGATGGTGCCCTGCCTTCAGATAGACTTCGTAAATTAG
AGATAGATGCCAACGCTGCTTTTGATCAATATAGAGAAATGGTGACAAAC
AATTGGACTGTGCGTTGGATTTGATGAGAAGATTACCCCCACAACAAATT
GAAAAGAATTTAAGTGATTTAATTGACCTCATGGTCCATCAACAATTTGG
AGGACAAGAAGAAACAAAACAACCTCCAAGCTGAACTCTTCAAAAATCTG
AAGGCTCGTCAAGAAAAATAGGATATGGAAAATAAAATTCGTAACACTTT
GAACGAAATTTATTTTGGTAAGACAAGAGATATCGTCAACAGCGTTCGAC
TGAAATGGACAATGCAGTTAGCGACAGTAATCCTCATATTATCAACATTG
GCCGTATGATTGAGACAAACAAAGCATCATCAGGGACGATGAACCTTGGT
GGTAGTTTAACGAGACAGCTGGGGATGGATCAAAGAAAATTCGTGGATGT
TGGGATTCTATTCATGTGGTCGAGGTACAAGAGAAGAGTGGTGGAAGCAA
GGCACACTATAAATTAACCTCCACTGCCATGTTATGGCTCCAGGTATTTT
GAGGGTGGAGTATCATCTGTTTATTTATGGGATTTGGATCATGGGTTTGC
TGGCGTCATCTTGATCAAGAAAGCGACCAGAATTATGTGAAGACTTACTA
TCATCAGTTGATCAACCACTAAAAATTGCTCGTGACAAAGAAACGGGGAA
AGATTATTTGTTATGCGATTACAACAGAGATGGTGATTCATACCGGTCAC
CATGGAGCAACACATACGACCCACCACTCGACGATGGTGCCCTGCCTTCA
GATAGACTTCGTAAATTAGAGATAGATGCCAACGCTGCTTTTGATCAATA
TAGAGAAATGGTGACAAACAATTGGACTGTGCGTTGGATTTGATGAGAAG
ATTACCCCCACAACAAATTGAAAAGAATTTAAGTGATTTAATTGACCTCA
TGGTCCATCAACAATTTGGAGGACAAGAAGAAACAAAACAACCTCCAAGC
TGAACTCTTCAAAAATCTGAAGGCTCGTCAAGAAAAATAGGATATGGAAA
ATAAAATTCGTAACACTTTGAACGAAATTTATTTTGGTAAGACAAGAGAT
ATCGTCAACAGCGTTCGACTGAAATGGACAATGCAGTTAGCGACAGTAAT
CCTCATATTATCAACATTGGCCGTATGATTGAGACAAACAAAGCATCATC
AGGGACGATGAACCTTGGTGGTAGTTTAACGAGACAGCTGGGGATGGATC
AAAGAAAATTCGTGGATGTTGGGATTCTATTCATGTGGTCGAGGTACAAG
AGAAGAGTGGTGGAAGCAAGGCACACTATAAATTAACCTCCACTGCCATG
TTATGGCTCCAGGTATTTTGAGGGTGGAGTATCATCTGTTTATTTATGGG
ATTTGGATCATGGGTTTGCTGGCGTCATCTTGATCAAGAAAGCGACCAGA
ATTATGTGAAGACTTACTATCATCAGTTGATCAACCACTAAAAATTGCTC
GTGACAAAGAAACGGGGAAAGATTATTTGTTATGCGATTACAACAGAGAT
GGTGATTCATACCGGTCACCATGGAGCAACACATACGACCCACCACTCGA
CGATGGTGCCCTGCCTTCAGATAGACTTCGTAAATTAGAGATAGATGCCA
ACGCTGCTTTTGATCAATATAGAGAAATGGTGACAAACAATTGGACTGTG
CGTTGGATTTGATGAGAAGATTACCCCCACAACAAATTGAAAAGAATTTA
AGTGATTTAATTGACCTCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040409XLOC_040409Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064440-exon-scaffold_415-1575043694:23602..23800TCONS_00064440-exon-scaffold_415-1575043694:23602..23800Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:15002..15091TCONS_00064440-exon-scaffold_415-1575043694:15002..15091Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:14335..14570TCONS_00064440-exon-scaffold_415-1575043694:14335..14570Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:14020..14099TCONS_00064440-exon-scaffold_415-1575043694:14020..14099Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:13638..13762TCONS_00064440-exon-scaffold_415-1575043694:13638..13762Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:13124..13177TCONS_00064440-exon-scaffold_415-1575043694:13124..13177Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:12514..12579TCONS_00064440-exon-scaffold_415-1575043694:12514..12579Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:12115..12191TCONS_00064440-exon-scaffold_415-1575043694:12115..12191Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1575043694:10331..11826TCONS_00064440-exon-scaffold_415-1575043694:10331..11826Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:23602..23800TCONS_00064440-exon-scaffold_415-1510915933:23602..23800Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:15002..15091TCONS_00064440-exon-scaffold_415-1510915933:15002..15091Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:14335..14570TCONS_00064440-exon-scaffold_415-1510915933:14335..14570Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:14020..14099TCONS_00064440-exon-scaffold_415-1510915933:14020..14099Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:13638..13762TCONS_00064440-exon-scaffold_415-1510915933:13638..13762Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:13124..13177TCONS_00064440-exon-scaffold_415-1510915933:13124..13177Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:12514..12579TCONS_00064440-exon-scaffold_415-1510915933:12514..12579Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:12115..12191TCONS_00064440-exon-scaffold_415-1510915933:12115..12191Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1510915933:10331..11826TCONS_00064440-exon-scaffold_415-1510915933:10331..11826Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:23602..23800TCONS_00064440-exon-scaffold_415-1491911889:23602..23800Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:15002..15091TCONS_00064440-exon-scaffold_415-1491911889:15002..15091Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:14335..14570TCONS_00064440-exon-scaffold_415-1491911889:14335..14570Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:14020..14099TCONS_00064440-exon-scaffold_415-1491911889:14020..14099Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:13638..13762TCONS_00064440-exon-scaffold_415-1491911889:13638..13762Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:13124..13177TCONS_00064440-exon-scaffold_415-1491911889:13124..13177Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:12514..12579TCONS_00064440-exon-scaffold_415-1491911889:12514..12579Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:12115..12191TCONS_00064440-exon-scaffold_415-1491911889:12115..12191Clytia hemisphaericaexon
TCONS_00064440-exon-scaffold_415-1491911889:10331..11826TCONS_00064440-exon-scaffold_415-1491911889:10331..11826Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
F-actin capping protein subunit betaTCONS_00064440-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_415supercontigscaffold_415:10331..23800 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
150.708 158.746 195.641 209.741 156.562 123.717 139.391 146.177 120.126 120.194 92.9601 84.3414 76.4124 72.4378 97.1785 98.8192 108.854 99.9569 72.7529 81.9238 88.1562 89.2107 81.4664 81.2808 67.0978 73.5949 106.083 82.1674 118.079 97.0188
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001698CAPZB
IPR019771F-actin_capping_bsu_CS
Vocabulary: Cellular Component
TermDefinition
GO:0008290F-actin capping protein complex
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0051016barbed-end actin filament capping
GO:0030036actin cytoskeleton organization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030036 actin cytoskeleton organization
biological_process GO:0051016 barbed-end actin filament capping
cellular_component GO:0005737 cytoplasm
cellular_component GO:0008290 F-actin capping protein complex
molecular_function GO:0003779 actin binding
Blast
BLAST of TCONS_00064440 vs. Swiss-Prot (Human)
Match: CAPZB (F-actin-capping protein subunit beta OS=Homo sapiens GN=CAPZB PE=1 SV=4)

HSP 1 Score: 462.996 bits (1190), Expect = 3.826e-157
Identity = 220/270 (81.48%), Postives = 239/270 (88.52%), Query Frame = 2
Query:  197 MGDKQLDCALDLMRRLPPQQIEKNLSDLIDLRPELCEDLLSSVDQPLKIARDKETGKDYLLCDYNRDGDSYRSPWSNTYDPPLDDGALPSDRLRKLEIDANAAFDQYREMYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIRGCWDSIHVVEVQEKSGGSKAHYKLTSTAMLWLQTNKASSGTMNLGGSLTRQTEMDNAVSDSNPHIINIGRMIEDMENKIRNTLNEIYFGKTRDIVNSVRSINNLEDKKKQNNLQAELFKNLKARQ 1006
            M D+QLDCALDLMRRLPPQQIEKNLSDLIDL P LCEDLLSSVDQPLKIARDK  GKDYLLCDYNRDGDSYRSPWSN YDPPL+DGA+PS RLRKLE++AN AFDQYR++YFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKI+GCWDSIHVVEVQEKS G  AHYKLTST MLWLQTNK+ SGTMNLGGSLTRQ E D  VSD +PHI NIGR++EDMENKIR+TLNEIYFGKT+DIVN +RSI+ + D +K   LQ EL + L  RQ
Sbjct:    1 MSDQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNQKFKQLQRELSQVLTQRQ 270          
The following BLAST results are available for this feature:
BLAST of TCONS_00064440 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAPZB3.826e-15781.48F-actin-capping protein subunit beta OS=Homo sapie... [more]
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