XLOC_040481 (gene) - C. hemisphaerica

Overview
NameXLOC_040481
Unique NameXLOC_040481
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_419:156962..161726+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040481 ID=XLOC_040481|Name=XLOC_040481|organism=Clytia hemisphaerica|type=gene|length=4765bp|location=Sequence derived from alignment at scaffold_419:156962..161726+ (Clytia hemisphaerica)
GGTGCATTTAGAAAGAGCAATGTCGATCAAAGAGCTTTGGTATACAACTC TTACGAAGAAATTCTCAAAAAGAGTTCGAAACACCATCAAAAAGAATATC TACACCGTCGGTAGTGGAAGTTATGACATTGAAAAAGCACGACACAGCGG ATATGTCGACATGTTCAATTACGACGATTATGATCACGTGACTatggatg acgtcatcgatgagaCAATGACATCATCTTCATTTCAACCGAAGAAAAAA AGCGATGCATCAAAGTATCAGTGTAAAAGTAATGACGTCAAAAGTCGTTA CCAGTATAAATCTGACGTCGTCAATTTACGTCACGATTATAAGTCGGATG TTGTCATACACGTCACTGACACTACACATTACGATATTCCGAAATTACAA CCTCTTGAAGATGATTTTGACGTTCATCCTGCAATGGATTCTGAGCACTT TTATGACGTTCCAAAAGCAATCATGCACGGCCATCACGACACACCAAACA TAAAAAAACGTCAACGGAAAACAAACAACGCCAGAAAAAACCGAGATTTT CATTTGAACGTTCCTGACCGGGATAGCATGGTTTCTGGAAGATATCAACG TTTGGTTTTACGTAAAAAGAAAGAATTAAAGAAACAACAGCGTAGAAGTC GTATAAATGAACTTTACGAAAACGTCGAAAGTGGATCCGACTCCGACAGT GATATGACGGATTCTGAGGACGACATTTCCGGTACTGATAGTCCGTATGA AGATTATTACGACATGTATACGCCGTTAGATGGATGTCATGATCAGAATG AAAAACCTGAGTTTTACGGACGTTTCTTCAGTCATACCTTAACACGTGAC AAAGAGAGGCTAAGTACAGGTTTTCAGAGAAGCAATTTCAAGCGTAGTGT ACATAGGTCCGTAAACGTCAAATTCGAATTCAAGAAAAGCAATACCAAGT TAGTAAACACACTAAACAGAGATAACccattgaaaaaaacttttgataaa gTCAAACTGTTGGCAACTGATGATTGGCTTTTCGAGCTTGATGAATCCAA GTTGGCCTTAGAACTAAAAATACGGAATGGTCTTGAAAGCAGGATCTTGT ACCACCATTTGAGAGGCTGGAAACCTAAAAATGGTTTCCGTGCCTCAGCC TGGAAAGACAAATTCGCAGAGGATTTGACAGTGTACGAACTATTTTTATT CATATCTGGTAATTGTGATTCAAAGTTAGCTTGCAGACTAAAAATATACC AAGTTGACGGTTATATGATGAGTCTGTTGGTGAAAGATGAACTTCTATTT CGAGATTGCTTACTGAGCTTGGGAGAATTGCAAACGTTGAGAGAATCGTT TTATCCGATACGAACCCGATGTGATGCAGTCGGGGAACACGATTTAAAAG AGAAATTCGAAGAACATTCTCATATGTTGTaaagggtttttttcttttaa ggaATTCTGAATGATCTCCGATTCTGGCgcccagagccacttgcaccacA TTATGGTTTTACTAATGGACGTGATACAATggtgagcgctatcagaataa acacccctgtcttacagctccactggaacttttttcctcaatgAGGATAA AATTCCTGTTGAAATTCCAATTGGAATAgagattctattgttccaaggtg gggatggttttagagtgTAACTTTTTAAACATGNATTCAAAAGTTGAGAG AATCGTTTTATCCGATACGAACCCGATGTGATGCAATCGGGGAACACGAT TTAAAAGAGaaattctaagaacattctcaTGTGTTGtaaaggattttttt tctttcaaggaATTCTGAACGATCTTCCATTCTGGTGCCCAGAGCAACTT GCACCACATTATggttttactgatggacgtgatgCAATTGTAAGCGCTAT Cagaataaacacccctgtctcacagccccactggaacttttttcctaagt ggggataaaattcctattgaaattccaattgGGATAGAGATTCAAagatt gttccaaggttaaaaaacccagtggggatggttttagagtgtaattttta aacatggaatttcgagtggggatgaaatcaaagtcgatttcccagtgggg ctgaaattcaagggtattttcccatcgggcttttttccagtgggactggG GTCCCAACGGGTCTGTTACACAGGGGTGTAGAGTAATACGAAAGCGGGTT AAAGTTAGAAAACCCTTCAATCGACTCGGAGAAAAACTACCAGAAAGGTC CAGATAAACACATAATAGGGAGACTAGATTAGAGTTTAACAGGAGATATA TCATATGCAACGAATTCAAGATAATCGAGGTCAACATTTCTTGTTAAACT CTTACCCAGTCTATTTAAAGATAGACCGGAGCGTCATTTTGAGCTTTCGT TTTACATATTCTTTAATAtacattttcaagatattttaaaaatcataatt AGAAATTACAATGTAAATAAtattaagaaaaattaaaattttgtcaacaa ttaaatttcatttcacGAATCTATAGTCGAGTCCTCTCAAACAGGGGTTA TCCTTTACCGATTCTATCTCAGCCTCCAAATTCATGTTTCTTTAGGAAAT ATGGAATAAACCATTGAAGCCACTTTGAAAAACCAGGaaatattgcaaaa attgaATGGAATACTGTATAAAAATTGCCTAAGAGCAAACATTACAACTT GGATGACTGAGACATTTCATCCCTATTCActctttttgtataagaactAG TAACAATTGCTATTATTTTGACACTTTAAGCCTCAAATTATTCATATCAT GTtcaagtctattcacgataagtgtgcactctttttcttttacctataac ttttgaaggaattcttcaatctttataaatttggtatcatcggaaagata ttagtgagtggaacaatttgaaataaaaagatctttaaaagaattctaaa aatgaagatgaaaatgaagaagaaaaaaatgaagatcttgtagaaaagtg ctataactttcattttcactggagagattctttgatcttaggagattatc actgtgaagaaattttattaaaatacttattaaatataaagttatgatac aaagttaataagtgattgaccccaaaaaaacagcaaaaaactgcagaaaa cagcatttttagacgtcaatcagcttataactttgtttgatatcttttga ctgaaggATTCACCTCAGTAATCcatccactcactaatatctttcccatg ataccaaatttttgaagattgaagaattccgtcaaaagttataggtaaaa gaaaaaagagtgcacacttatcgtgaatagactttaattaaAGTGTGAAA TCAGGATATCATAGGCTTTACATTCaaattttactactttgacccctaaa ttgcttaaaattgagtaattctaggcttagcattgttcttaaattgttct catttttcgaacctcataattcttataaaattttcttataaaaataagag TTTAATCTTGATATCATTGTCTCCTTTGTAAGTCACAGTGGAAGCAAAGA AACGTATTTTTTGTTAGTAaaaccatataagaacataaggcggcttcgat ggccaaattgttaagaatatgttaagatccttttaaggctttgtagactc taGAACACCTGGgtccttaggaaaatggacaaaaatactcacaaaatggt gaaaataagaacatggtaagaacatttttaggcttagagctcaaaaagtt tttggatgttcttataaaaaaacgtgtacacaataaaaaacatcaaagca TCTCATCGTCCATTGGAAAGTAAGTAGTAAGTGTGCGACCGCTTTTAGGG TGTAACCCAGAGGTTTCCTTTTATTTTAATCCGTCTATTTAATTGCTATG CATCAAGCCGAGAATATCAACGAGTACAATTTCAGGAATGACCCTTAACC TTGCACACCGTACgtggatgctctacctttatgCTTGCGGCCAATTGAAT AACTCTTTTAAATAAAGAACAAAAGATATCTATTTACACTTTTTTACATT TCCCAATCAATAAAGCCAACAGTCAAAAATGCAACAATCTTGACAGCAAC AGTTAGGTACATAGCTAAActtggtcaaatttttcaatattttctcttGT TAAACGTGTGTTCTCAACGTTTTTAATTTGAGGTAGAACCATGTGACGTG TTCCGCCTTGGAATGAAGCTTCGTGAGATTTCTTCTCTCGCAACTCAATA CTCGGTGTTCCATCGTCTAAACTATTGAAATAATATCGAAGTCGACTTTC CTGTAACGTGTTTTTACGAGATACATTTTTACGAGAATAGTCGGAATCGG TACCGAATGACAATGATCGGCTTTTTCCATTCCGACAAATTACCGAAGTC GAATCGTCGGTAAGAATACATTTTGTCTCATCGTTTGAAACTCGGCTGTA TCCTGATACAGAAACCTCGGCTATTGACGGCGATTCTCGGTAAAACGAAC TTGATGAATCGGAAGAAGACATTAAGATATCGTCAGAAAATACCGACGAC GATTTTTGTAAGAATCCTCGTGGACGATTTCCGACAACACTGTCTTGTGA CATAGCTCTTCTTGATAGTAAACGCCTTGGTGTAGAACACGTTTGGGGCG ACATGCTGGGCGGGATCGGGGTTGATCGACGTTTCGGTCGCAAAGACATG ATTGCGAGGAAGATTTATTCTTCCAgaaatttatgatgaaattttatcac tttttttgctaaaaC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064545TCONS_00064545Clytia hemisphaericatranscript
TCONS_00064546TCONS_00064546Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064546-proteinTCONS_00064546-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:156962..161726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26 0.21 0.26 0.34 0.81 0.55 3.51 3.5 2.84 3.09 2.18 1.85 1.25 1.12 1.61 1.94 1.06 1.27 3.5 2.98 1.61 1.69 2.05 2.72 1.81 2.04 2.97 2.39 5.17 4.57