XLOC_040485 (gene) - C. hemisphaerica

Overview
NameXLOC_040485
Unique NameXLOC_040485
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_419:466265..469634+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040485 ID=XLOC_040485|Name=XLOC_040485|organism=Clytia hemisphaerica|type=gene|length=3370bp|location=Sequence derived from alignment at scaffold_419:466265..469634+ (Clytia hemisphaerica)
cttatattttaattaaCAGAAAAATGGTACCCAAACCCCATAAGCTTTCA
CGAAAGCGTATTGCTATCATAGGCTGTGGACCAAGTGGAATGTCTATGTT
GATCACTTTAGTGAAAGCAAATCAAAATGGTGACCAGATTCCTGATATTG
TATGTTTTGAGAAGCAATCTATAATGGGTGGACAGTGGGTGTATGAATGG
CAGACGGGCGTTGATGAATTTGGAACGCCCGTTTATAATTGTATGTACGA
AGCTTTGAGATTGAATAATGCAAAAGAAGCCCAAGAATACCAGGTATTCC
GTTCAACATCCTATCCAGTCCCTTAGTCCATAAGAAAAGCATGGCAGTTA
GAAATAGTTTTCGattgatctgtaaaaacaaccaATGTCAATTGAAAACT
ATTTCGGCTGCAAACTCCGGTAACTGTTATTTTTAAATAGCGAACCATTA
TGTTAACATCTTTGTCGTGGTCAGTCTTTCTTAATAAATCTAACATAAAA
ATTAAAGGAGTATATCCTAGTAAGTGCGATTGCAAACGCAAACCAATTCA
GGAAATCAAACCGGAAAGATCGGGAAATCTAGCCCGACTATCGCGATTGA
TCggatttacgcacaattacaaatgaaaaacactgattttaagaaactct
TTAACCGGAGTTTAATAATCCCTAAtttattattttctcttttattttac
atATTCAGGCTGACAAATGTTATATTTCTTATGTTATATTTTTGCAGGAT
TACACTTTTGAcgagcacttcaaaaaaccgaTATCATCCTACCCTCCAAG
ACATTTGATTCACGACTACATCCTTGGTCGAGCTAGAAAATACGATATCG
AACGATTCgtgaaattttcaatatttgtaAAGCAAgtggtcaaaaatgaa
aatggtgTCGGATTTTCGATCACTTATGAACATTTACCTATTCGAACATC
AAGTCAAGAGTATTTTGATTACGTCATCGTAGCAAGTGGTTTATACACCA
CAGCGTTCTTTCCTGTATACCCTGGGATCGAGACATTTCCTGGTCGAGTT
ATTCATTCTAAAGATTTCCGAAGAAATGAAGAATTGATTCAGGTTCAGAA
ACTTTTGATCGTTGGAACGAGTTTCAGTGCAATGGATATTGCTCAGTTTC
ATCAAAAGTTGAATAGTACTGCACACACTTATCTATCCTACCACAAAGAT
GCGCCTTCAATCGTATATCCTGAATCGCCAAGAGTCCTTAACATACCATG
CTTACTCAAAGTCTCGGGAAAAACTTGCTATTTTAAAGATGGAAACAGCT
TCGAATTCGATATGATCATTTTTGCAACGGGTTATCAAATCAATTTCCCC
TTCCTGGAGCCTGATTTGAAATTAACTGCCAAAAAACAATCTTTGATTTA
CAACGATCTTTACAAAGGTGTTTTCTTGCAATCAGAACCCGATTTGTTAT
TTATAGGAATACTAATTCCGTCTTTTTCTTTCGGGTTATATGATGCACAA
GCATGGTTGATAAAAGAATTCCTTCTCGGTAGATTCGATATACCAGATAG
AGCTCAGCGACAACAGGAGATTGATTTCTTGTGGGATAAATATCAGACTC
TTGCAAAGGCAATGAAAGGTGACCGAAGATTTGCATACGTGTTTTTAAAG
TTCTACTATGAAGAACTGTTAAAGGTAAACTATTTTCTTTTGACCTCTTT
TTCAGACGTTTGTAGAAACAATCTGGCAAAATACTTTTGTatgaaaaaca
cagaaaaatttgcaatacccccttctcacagacccaatgGGACTCCTTCC
CATTGGAGATATTGGCCAATGTCTTCAGCGGAAAACTAAACCCCAacttt
tgtccccgctgaaaataatcaaataaacaaatccttacggctgcaaaata
ttgtgttattttttccatccccgttGAATttcctgacttgaaaacaatag
agcTCAAATACCCAGCCATAAAGAAAATGGAGAATGTCACTCGCCATCTA
GTTTTAGTCCATTATTTTTTACCCTAACTAGCTGAAAGAAGCCTaccggg
tttgtgagaagggatGCTTTGCAACAAACTTTCAGTANATTATTTTTTAC
CCTAACTAGCTGAAAGAAGCCTaccgggtttgtgagaaggggtgcTTTGC
AACAAACTTTCAGTACACATACTTTAATAGTATAATGCAAACCCTTTGCA
CTGATTACATCAGGTGGAGtcaccaaaaaaacaaaacaaaactcagTCAA
ATTGCTACCGATGAGAAAACACCCTCAAATTTTAACACATCAGGTAAACA
CACCCAGCTACCATTTCCACTGGGAGAGTTTTACTGGATTTTTGAGTTGT
AAGCGATAAATTTTAGAAATTCCGAGATGttataaaaagtaaacattttA
TCCCCTTTGGCATAAAAGAAAAACAGGGTATTGGTATTATAAAGTCTATT
CTAAAGACTCTTTGATCCGAGAAATTTCaccaaaatatttattcaatata
aagttatgatacaaagttaatgagtgattgaccccaaaaaaacagcagaa
aacagcgtgtttttagacgtcaatcagcttataactttgtttgatatttt
ttgactggatgattatttttgagaatttttttcacagtgatgacgttcga
tgagcAAGGATTCATTTCAGTGAAAAtaatagttatagcacttttctaca
agatcttcatttttttcttcttcattttcatctttatttttggatttttt
ttaaagattttttttatttcaaattgctccactcactaatatcttttcaa
tgataccaaatttataaagattgaataattccttcgaaagttataggtaa
aagaaaaaagagtgcacactgatcgtgaacagactttagagATATAATGA
CATATTCGGCTCTAAAAGGCCCTAAAACCTTTTTGAGAATAATTCACGAA
TTTCGAAATTgtacgaaaatgaaaaaaaaaaaccttttattttgattttg
gtgcaattaggcgagaattaattttggcgaatggtcCACAAATAAAATTG
TTGGTGAATATTTGGCCGAATTAACCgaaatttctttccgccaaaatttt
ttttctttaatttatatCTTATTCTAGGAGACTCCGGGTCATCCTCAGTT
TATCAACGAACTGATGGTCGACATGCAAGCAAACAACAATGAACGAAGAG
CTACGAATGCAATCACTTTTCGTGAAGATCAATACGTTTCGACGTTCACA
AATACTAAAGCAGCTTCTAGCACTTCTGGATAGCCAACTAAATTTGGTTT
TATTGTATACGTTGTTTGTCAAATTTCTAACTTCCATAGGATTTGTACAT
TTGACCATTGTAGTAGCACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064550TCONS_00064550Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064550-proteinTCONS_00064550-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:466265..469634 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.03	0	0	0.08	0.35	0.34	0.3	0.11	0.13	0.45	0.44	1.69	1.96	2.42	1.78	0.39	0.71	1.53	0.79	0.48	0.26	0.53	1.07	0.32	1.27	1.51	2.17	0.03	0.05