XLOC_040561 (gene) - C. hemisphaerica

Overview
NameXLOC_040561
Unique NameXLOC_040561
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_420:262585..272433-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040561 ID=XLOC_040561|Name=XLOC_040561|organism=Clytia hemisphaerica|type=gene|length=9849bp|location=Sequence derived from alignment at scaffold_420:262585..272433- (Clytia hemisphaerica)
TAGGAAAATTCATTCAAAATGTGGTTGAAGGTTTCAACTTTGATCACGTT
CGTTTGTGTTGAAACTATCCTCGCTGGTGAACAAAGTTAGTAATTTCTAT
TCTTCATTTTACAGTTTCATAAACATCGAAAAAAGGTTTTTCTTTTCCCT
CTTTCTGACCCACATCCTTGTCAATTGAATGTGAAAAAGCTTGTGACTTA
AAATTGATGAGTAACCAAAACGATCACTTTTATTTAAAAACTAAACCTTT
AATTTACAAGACATTCAACAATAAATCCATATCGTTCTTTTTAAGGCACA
TTCCACCACAAAACATGCGAGAGAGATTACACCAAAGTAGGATGTTTCAA
AAAACAAGCTTTCTTCAAAAACGTTTTGGAACAGACTGATGATTACACAA
CTGACTGGAACAACTTTGCTGCCCATTTACACAGGTTTGTCCACGTGTTC
AGGGACCACGCCTTTTCAATCTAACTCAAGACCACACCTTTTCAATCTAA
TTTGCTTATAGTCTTGTTAGTTAGAATATTTCTAATCATGTATCAGAACT
GCGTTTCGTTTGCTTTAACCTGGAACAGTTCATGTGTACTCTTCCCTTCA
TTAGTAGTTCAGGCTCGCAATAAGTTTCAGCAAGTTTGAAAACCTTCTAT
AGTAAACAAGACTCCCTGCTTGAACAGGGATAAACAGATCCTCCTTAGAG
TAAATAAAACTTTTCTCACAATTGGTAGGTAAGTCAAGGTAATAGATGGA
TAGATCATCTCTGTAGTAGCTACGACTTTTTCCTACAGTGAGTAGATAAG
GCTAAATCACTGCTACGGCGAGACTCCCTTTCCCAGCCAACTTCCCTCTA
CATGTTTTCTTACTGCAGTTCCAAGCTTCTCCAATCATTTTAAATTAATT
CGATCAGAATTTTCATTCTCATCGTAGCATGGCATGCTCGTGTAAAGAAA
AAGCCTTCAAAGGTGGCTACAAATATTTCGCCATTGGAAATTACGGCACT
TGTTACGGCGGTAAAGACCAAGCCGCTTATGAGCGAATGTTGAAAGCTAG
TGGTGACGTCACTGATGATTGTTTGTCTGGTAATTTCTACGAAGAATGCA
GTGGAGATAACAACAAAGAATGTAGTGGTGGTGTCGACTCCGTTTTCGTT
TATTCTTTCAAAGCTTTCATGCCAACTCAACCTACACGTAAGCTACCCTC
TTAAATCTTTACCTTAATCGGTTCTTTTTACGCCCGCCCTAATTTAACGC
CAGCCCCTTTTACGCTGCCCCATTTTAAGCCAGCAACAAAGAATGTAGTG
GTGGTGTCGACTCCGTGTTCGTTTATTCTTTCATAGCTTTCATGCCAACC
CAACCTACACGTAAGATATCCTCTTAAATGTTTATTTTATCGACTCTTTT
TACGCCCGCCCTAATTTAACGCCAGCCCCTTTTACACTTGCCCATTTTAA
GCCAGCAACAAAAAAAATAACGCCCTAAAGGGCTACCACAAAAAGGGCTG
ATGTGTTGGTAGGGTCACTGATTCGTACAGTCTATAAAATCTTTACTTCG
AGTAAATTCTATTGACCACAACCAGTTTGTGTCAGTGCTTGTAGCTGTTT
TCCCTGTTTCTTGAAGAATCAATATTTAAGGCAAAAACAATAAGGCAGTC
CTGATCCAGTGCGATTTTCTTTTATATCCGCCCATATTTTTCACAAAGAA
AAACTTGTTATTGTCAAAGAAAATTCAAAAGTTCTTTTCGGATCCCAGAC
GAATAAATTTAACTCTCCTGAACTCTTAAAGCAGATAAAGATCGTGCTTA
AACCAAGATCAAACTTTCAGTCGTTTCAAAAAGTGTAGCGTTAGGCGTGT
AAAAGGAAGCCCTAGAACAAACCTTTGCCTGACTCGAGAGCCAGAAACGG
CTAGTTTGTCAATCCTCTCTGGCGATTGGGCGACGGACGAGGTTTAGAGA
TGCATTACAATTCTCAACATAATGTCGTAGACCTGTAAAATATAAAAGGT
CAATAACAAAAATACTCCCTCTACTCAACATCGAATGAACCATTTCTTTC
TCAATTTGTAGCCATCAATGGAGGTTACAACCAATGGTCGGAATGGACCA
CCTGTGACAAGACGTGCGGTAAAGGATATCAAGAACGTGAACGTGTTTGT
AATAACCCACCACCTTCAAGAGGTGGAAAAGATTGCTCTGTCTTAGGGGA
GCCATCTGAAGTTCGTCAATGTCAATTAGCTGTCTGCAGTGAGTGTCTCA
TTTATGTTGTAGTGTTCGCGAACGTGAACGCGAACTTTTATTTTATCAAA
CATAACATTTAATGTATCTTGTACTATATGCTAACACGTCATTTTTAGAC
GAATTTCTCCACCTTCCGGTCCGGTATGTACGAGCAAAAACAACATAAGA
AATCGGTTTGTTAATATTTTAATTTGCCAGGATTAGAAGCAATTTACTTT
ACATTTCATGAAAATATAATGTTTTTAAACCCTAAACTCTATAATTTGAT
ATTCTTTTTCTCAGAACCCGCTTTGGTGAAAAGAGGAGAATTGATTTACC
ATTTCTCATCGGCGAAGAAAACGTTCGCTGAAGCTGAAGACTACTGCCAG
AGCATCGGAGGACATCTTGCCAGTATTCACAGCAAAGAAGAAAATGATTT
CGTCCTCAAAGAAGCACAAAACCGGTGAGATATTTGAATTATGAAGACTA
CCGCTCCTCGAATAAAAATACACCATTCGGCGCCCTTTGCATTTTAGAGT
TATTAGTTGCGACAGACTTTCAAAGATATCGAACTTCAGGCTTGCAACGC
TTCTTGAAGGGGATAATCAGCTACTGTAGTTTACATTTTCAGATATTTTA
TAAAGTTGCTTATTTTCCAGTGTCCATAAAGTCAATCAAATCTACTGTTT
TTCTTTGATTTTAAATTTAAACATACCATGGAAAACCTAAATTAGCGACT
CTTAGTTCTAATATTTTATACTTTGCTGTCCTATAAAAGTTTAAAGAATA
TATAACTTGAAATTCATTCCAATAATTTTTCAGAGGATTGGTGCACCCTT
ACATCGGTGGAACAGACGCTGGATCCGAAGGGAAATGGAGATGGAATGAC
GGAACAGCCATGGCTTACAAGAAGTGGTTACCTAACGAGCCGAACAATAA
GAACGGAAAGGAGCACTGCATGCATTTGTGGAAATCGAACACTGGATGGA
ATGATATTTTTTGTGGTAATAAGTACAACTTCGTTTGCAAAATGTCACAA
TTCCATGGGAAGGTGTATTATGTTTCCACGGTTAAAAAGAATCATGATCA
AGCAGAAAGTCATTGCAAAACAATGGGAGGTAATCTGGTCACTATCCATA
GTCAAGCTGAAAATGATTACGTTCACAAAATGGCTAAATCGAGGTGAGTG
TGAACATGGTTTACCTACTATATAACGTCGAACGGATCAATCGATAAGCG
TGCAGTCCGTTATTCAACCCTTAAAGGCACAGTCGAGTTTCGAAGGGACT
GGTAGTGAATTTACTTTGGAAATGACGTCCAAAATTCTTTGAAACGACAT
TATGACGTTATTCCTTCCTGGTAAACTCAAGCTCAGTCTCCTCGCGCTTT
AAAGGTCGAGAGGTTTGTAGACAGGAGTATAACCAAATATTTAAAACTCG
CCCAACTCTTCCCTGTCACGAATTTATATATGTGTATGTTAAGAAGCACA
ACGATATAGACTGATATACATTTCATTTCTGCCATAGTGTGTTTATTTAA
GTTCAAAGGGTAATCAGGCTGATCATCCAAACATTTTTAAAATTAACAGT
CCACCAGTTTTCACGACGTACTCTATAAAAGATACTGTGTAGTGGATCTG
AGAAGATGAGTGCTCAAAATTTATGCCGGAAAGTGTTTTATACAAGGAAA
TAAATTCATTCGTCATAAATTTTGAACCACCACTGCCAGTTAAATAAAAT
AACATCACATTCGTTATTTTTTGCTTCCTTAGAGGATACCTTGACGTTTT
CATCGGACTTCGTGACGTCAATAAAAATGGACAATTCTCTTGGGTGGATG
GCAGCAAAGTCGTGTTTACTGATTGGCAAAATGGAGAACCGAATTTCAAA
GGGAAAGAGAACTGTGCCGTCTATCAACACATCAACTTAGCCAAACATGG
ATGGAATAATATTTACTGCAGTGGTGTTAAACAATACATCTGTAAATACC
AACCCGATATCTTGGTTTACACCTCAGGTAGGTTCTAATAATGCTCATAT
CCTGCGCTGTAACCGTAAAACTCTTCGGATAAGCAAGGCCAAATGCTTGT
GAAAGTTATAAAAACTATGGTGCTTTTCAACAAGACTGGCAGTCCGTTAT
TTTTTAAACATTGCTCTTTAGAGAAAAAGATACGGTATAGTAAAAAGAGA
AACTTGTTGGAAGGATAATTAATGCTGAACAGCTTGCTGCAAACCAAGAA
TTTCCTCAAAGTTTAAAAGGAAGATGAAAAAAGAAGAGGAAAAAAATATT
TTTTATACTGGAACAAAAACTTTCGCTGAAATATTATTCAAAAGATATAA
CCGCACCTAGAGAGGTCTAAATAGGCGCCAAATATGATTGTCAGAGTTTT
AAGATCATAGGAAGAATTAAGGACAATATTTTGTAGAAAACTGTAGCAGT
AATGAGGTCTACACATGTGGGACCGTGAAATCCCTAATAGTTCGGAAATA
ACTAATTCATGGAGTGACCTTCCCGTGTTCTTGCAGAATCACTTTGCCCA
AAAGAACGTGGATTTTGTGTCCGGTCTGACGGTGCCGATCAAAACAGTGG
AGTAATCAAGGTGAACGCCCTAGATGGAAATACAGACCAACATCAAAAAG
ATTGTTTGAAGAAATGTCATGCGCACAAAGGAGCTACTGGATGTGAAGTG
ATTTGGAACCAACACAATCGAGGATGTTATATCCACACACAATCTATCGC
CAGAGGGAATAACGTGGATAGACATTACTGCTGGGTTTTCTCCAAATGCG
CCCAAGGTTAATATGAAAAAGCTTAAAAAAGAGATCAGATTCTGACCCGA
ATTGCTGTAACTTAGAATTCAATTTCAATAAAGTTACGCCCTTATTATCA
ATTTTATCATTCAAATATTTTTGCAGGTGACAAATTCGTTCCACACGGTG
AAGCCAGTTATTATTTCTCGGACAACAAAGTGAATTATAATGACGCCGAT
GCTGCTTGTCACCACATCGGTGGTTTCTTGGCTAGTGTGCACTCTGCTGC
TGAAAACAAATTCATATCTGATGAAGCAAAACGAAGGTAAGAATTACATT
TGTTACCATTCATTAAAACTCATCATGTGAACAGAGTCTTAGGTTTAGTG
CATGATAATAATTGGCTTCTCCTTACATGGGTGGCTCGTCATTGGTTCAG
GAGTCGTCTCGTTAGTACCACACACGATCATTTATCCAGGGAATCACAAT
TCGAACCTATTGTCTCCTTAACTCGTACAAGTTTTCTCGTCCTTTAAGTT
AACAATGCCTTATAAGATAATCATAACTCGAAATTTCTATAGCTCGAGGA
AATTTGTGTTCCTAGTGCGTGTTATAGTTATGAGTGGCTCGATTGTACTA
CCTTTCAGTTTCTGAAACACTGACACAGTTTCAAGTGTATTTTCCAACGT
TAGCATCAAAGCTAGAACAGTCTCCAATCAATACCAATCGCTCCCTTTCA
AGGCGGCAGATAACCAAGAAAGTATTGACTGACGGCAAATGAGCTTAGTA
AAGCTCAAATTGTATAATGTATATACTAAACTCTGTATATTTAGTCATTT
TGAGTTGAACATTGTTAAATATTGGACATGTGAACAACGGTGCTCCAAAA
AATCATTCATCTTTTCTTTCCATAGAAAACTTGGTAACGTTTGGATCGGT
GGTAACGACAAATCACGAGAGGGTAGTTGGGTTTGGAATGACTTGACTCC
TTTCTCTTACAAGAACTGGGCCAAGAATGAACCTAACAATGCTGGCAAAG
GTGAAGATTGCCCAGAAATGTATGGTACAGGACATTGGAACGATCATTAT
TGTGACCAAAAGAAAGCTTTCGTCTGCAAAATCTTGTACTTTAAAGGTAT
GTATACCTTCGAAAGGTGTGTGTCCCCATAAGATGTACAACAGGAGAAAA
CTTCTTCAGAGGGAGGGGGGGGAGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGC
GTGTTATAGTTATGAGTGGCTCGATTGTACTACCTTTCAGTTTCTGAAAC
ACTGACACAGTTTCAAGTGTATTTTCCAACGTTAGCATCAAAGCTAGAAC
AGTCTCCAATCAATACCAATCGCTCCCTTTCAAGGCGGCAGATAACCAAG
AAAGTATTGACTGACGGCAAATGAGCTTAGTAAAGCTCAAATTGTATAAT
GTATATACTAAACTCTGTATATTTAGTCATTTTGAGTTGAACATTGTTAA
ATATTGGACATGTGAACAACGGTGCTCCAAAAAATCATTCATCTTTTCTT
TCCATAGAAAACTTGGTAACGTTTGGATCGGTGGTAACGACAAATCACGA
GAGGGTAGTTGGGTTTGGAATGACTTGACTCCTTTCTCGTACAAGAACTG
GGCCAAGAATGAACCTAACAATGCTGGGAAAGGTGAAGATTGCCCAGAAA
TGTATGGTACAGGACATTGGAACGATCATTATTGTGACCGAAAGAAAGCT
TTCGTCTGCAAAATCTTGTACTTTAAAGGTATGTATACCTTCAAAAGTTG
TGTGTCCCCATAAGGTGTACAACAGGAGAAAAACTTCTTCAAAGGGGGGG
GGAGGGTATTTTGACGGGGGTGTTGCTTTAATAAGAATATATCGTTTATT
GAAAATGATTCGTCTATGGCGAGACAAATATGTGTAAAGGAGGGGTGGGG
ACCATTGAGTTTAAAACCCGAAGGGCTAGAGTTCAATCTCTAACCTTTCT
CAGGCAAGAAAAAGTGAAGCCTTAAAAAATGCATTTTGACGACAGATTGA
ATCTAGCAATTCCTTTGTTTACGATTGATTTTTTTTTCGAAATTTAGCGG
TAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAGGCGAGCCGCTC
AAGGCCAAGCAACTGTGGTATGATTTGTTGGCTTCAAATCCTACCAAGGA
GATTGACTTCTAGCCCTTCGGGCTTATACTTCATTGGTGGGGACCGTACC
TCGATAAGAGGAGTGGTACCATTTAGGAACCTGGTACCTGGATAGGAAGA
GGACTAAACCTTGAATTGGAGTCAGTTAGGAGGTTGAATGTCAGTTGAAG
ATGGGTCTTGTTAGGGTGGGAAAAAATATCTGAGGAATGTGATACATCAA
TAAATATTTTCTGCATTGTTCTCTACCAGGAAACCGTTATTTCATTTCAT
CTGCCAAGAAGAATTGGTATGACGCTGAGAAATTCTGCGCAATTTTTGAT
GGACATTTGACCAGCATTCACAGCAAAGAAGAAAATGATTACATTTACAA
CCAACTCGTCAAACGGTGCGGTGTTTAAAGCACGTTATCTGTTAGCGCTA
ACCGCTAGAACTATCTCCCTTCCAGACAAAACATTGCAAAATATCAACGC
TTAATTCTACTTACAACTAAAAAGTATACTTAGTAAGAATAAATTTCAAA
GTTTTGGACTGAGAAAACCCATGCAAGACCTCAAACGTTTTAAAGATTTC
CCCTTCACACGAAACGATCGAACTCAAAAAGGTTTCAATTTATCTAAGGC
TTCTAAGCGTTGCAATATTTTCGTTTTAAATCTTTTAGAAAAATCAAGCA
TCCATTCGCTGGACTGAACGATCAAAAACAAGAAGGGAAATGGGTGTGGT
CAGACGGAAGTGAAGTTGATTATTTGGCGTGGTCACACCGTGAACCAAAC
AACTTACGAAATGAGGATTGCATGCACGTCAAATGGAAGTCCACCAAATG
GAACGATATTAAATGCATGAATAAATATCAATTCGTCTGCAAATTCTAAA
TATTGATGACGCCATCAACTTTGGGGAAACTATTCTATCTTTGGTTACTT
TCTTATTTAAACTCTTTTAAGTTTCGTTTTATTAGATGTTATCTATCTTT
TTGTCACTGATTCTATTCTCAATTTGGAAAGGATATCTCTTTCTCTTGGT
CTTTTTTAAATGTAGCATTTCTATAGTTTTCTTAACGTTCTAGATATCTT
CATTTTTAAGAATAAATTTGCTTGCTTTCCCTTTACGTAAACTATTTACT
ATATTTCCTTTAATAGTTTCAGCAGCCATCGCTGAGCAGCATTTGTTTAA
TAACTTCTGTATTTTTCTATTTCATATCTACATAGTTAACATTTTCCTCA
GATGTCTTTCGAAGAATCATTACATGAAAAACTTAACAATTTAAACAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064673TCONS_00064673Clytia hemisphaericatranscript
TCONS_00064672TCONS_00064672Clytia hemisphaericatranscript
TCONS_00064671TCONS_00064671Clytia hemisphaericatranscript
TCONS_00064670TCONS_00064670Clytia hemisphaericatranscript
TCONS_00064669TCONS_00064669Clytia hemisphaericatranscript
TCONS_00064668TCONS_00064668Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064671-proteinTCONS_00064671-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:262585..272433 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.77	0.84	0.61	0.43	1.15	0.84	1.05	0.76	0.38	0.87	0.79	0.63	270.32	229.27	0.39	0.89	81.28	107.27	1008.82	1310.38	233.14	270.53	45.82	78.07	181.27	181.93	0.35	0.23	0.24	0.29