XLOC_040581 (gene) - C. hemisphaerica

Overview
NameXLOC_040581
Unique NameXLOC_040581
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_421:88297..93645+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040581 ID=XLOC_040581|Name=XLOC_040581|organism=Clytia hemisphaerica|type=gene|length=5349bp|location=Sequence derived from alignment at scaffold_421:88297..93645+ (Clytia hemisphaerica)
tatttttcaggtGGCCCAACAAGAGAAGAACGGAtaaaaaataaggataa aaGTTGTATATAAATTAAACCTAACAAAGGAAAAAACATCTTGTACATTG AAACATTCTATCAATATAAAAAGGATCCCAACGAAATTGAAACAAAATGG CGCATAATTAAGGATATCAATACCTTATTTATAACTTTCATTGATATTAA AGTTGAAATATTATACtatcaaatccaaaaaaacaaaatacattgaataa aaaaaaacagaccaATAAGATAAAGACAAAATTTTAAACTGTGCTATTTT AGAAGAACTATTGTTTCAGTATATTGGTacaaatatactttataagccAA CAAATTTCCAAGAGGAAAGTGGATATTCATTCAATAGAAGAAGATTGGAC GTGGGGTAAACGGAAAAAACACATCAATCCAAACCATCCGGACAGACAAA GTCTTATTGTGTCTTTTTCGGACACCTGGTACATTTCGTTTACAGTTATT GTAAATTGGTTTGTGAATGAACATTGTTTTTTATCGGCTTGGATATAGAA GATATATAAAGATCAATCTTGAAAGGTCGAGAAAGTATACGAATCGGGGA AGAGCTACTTGGGAATAAAAATCTCAAAGGATTGAGATTAAAGAGGACAC AATAATTTTACGAAATGGATAAACTATATACTGTTTGGCTGGCACTTATA GGTATGTATTTCGTCTTAGATTCGTTTACTATACAATAGGCAATTCGCTT TTTAGCCTTACTCTTATGAGTAGGAGTTTTGCGCTCGAAATGAAGGAAGA ATCTTTTTAACGATTTTCAGTTTAATATCAAAGAGGACTTTAAATATAAA CTAAATTTTACCAGGTAAAtcaaattttctgttttgactTTATGTTAGGC CTAACTATCCCTAAACAATGACTTATATTTCTCAAATTTATAAATCAATT ATGAGGTATTTTCTTTGCCGCCCATAATTGAAGGAGATATTCCATTTAAA GGCtctcgttaaagtcttttgtgTGCTCAataggtttaaaatttttattc caAGTCCAAGAGTTAAACGATGTAACGTAACCCGGCAATGTGAACTGCAT ATTTAGGTTTTTTCGGGAAAACACTTTCTTTAGTTACTGAGAAACAAATC ATTACCTTGACCTTAGATGTTTATTTTCAGCTGCATTTTCCCCTTTCAAT CAAGATTTCAGTGTTTTACTGAATCTTATCTGTATCCCAGACCTATTGGG ATTACAGATATCTTATACTAGATCGAGCTTTTCCTACcctatttcaagca aaaaaaatcgccATCTTGGATGTAGTGACGTCACAATTTAGCTTGCGAGA TCCTCGAAATTTTGAAGTCGTTGCCAGTATCAAAAAGGCTTGTggcctac tttcagcaaagatggtggattattttgcttcacccgCCGTTGTTTGGGAA ATACAGACTGGTTCTATCTAGTGTTTCATATATTGTAAGATATCTGTGCC TATACCTTACAAGTTCAGCTGTACTGGGAAATTGAATTTGATATTATTCC CATTTGTAATTCAATGGGGAAAGATGCGAATCAAAACCATCCCTATCTGG AATTTCAAACTTAGAAGCTTGTATCCTCACTGTGAGAAAATGTTCCACCG AGGCAATATGACaggataaaatgaaaacaattctCGCAATAAGAcaggat aaaatgaaaaacaattctCGCAGGTACTGAACATATGAGTACCCTCACCA CACCACATTCAATGTTCGGCAAATCtccccacactcttgtatcagagtga tggtacctAATTCCCCTCACTTGGTATGGGTTGATCCAGGTCAAGGTACA TTCAAGTTCATTCAAGCCAAGTGAATGTGACTTTTTGACAGGTTGtactg atttttcaaaaaatccaaaaaattgatttgtttttattcttGTTTTAGGA GGCTTCTTAATTTCGACAGTTTCTGGTGATCACAAACAATATGACGGTAA TTTTTTGTCAAACTCTAAattaatttaaaggattttcacTTTTCCAAGTC GTGCAAGCTTATATGTTGAGAAGTTCTATTGTTTATTCTTAGTAAGagca tggaattattatagacactggaaaaacaatgagctgatttttgccaattt ctcatgtacaagccttgtccgcagtaatgacattattgttcaccctcctt cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ccaattcccaaatgagactttaagttctcctccgagattcaaactcgtct agttaattactaattatacgtcgttctgacgttttaaatttcgagaaaga AGGAAAAACATGttatgtacagggtgtccctaattaaagtatcgagtttg aacatgcgattgagtagaaaagtttttgtgtgttatcactaaaatataag aacgttctccatcacacaggcttattacaaaaggtagttacaacgtataa attaatcgtaatgacaaagaaaaagaagaaaaaggagggagagcttaaaa tacaattttgtgaacacgcacataaaacttttctactcttagttgtgttt cgactcgatactttaattagggacaccctgtataaaaaattgaatattga caccagaaatttttaaacttcaacctaaaaaaatccactgtgccaccacg tgccaccaaaagatttttataCCACAGTGCAGCTATGAGACTCACATCTT atatatgtcaatctcagctcttctcggagaaatattggaaagatattccc aattcaaaatttcgtgtcattataagcattttcttggTTTTACTTAtctg atgatttttttctcacaccagatttcataaatgtatccgtttggtattct agcattcATTTAACTCGATAGGGGTCGATAATCCCCTGAggattttgata ttattttcgggccagaaaattcagagtcgatggaaaaaatagcataatat tttaaaatgtaGATTTGCTTACCTGATTaatttcagcggggacaaaaaat GGAATATAGTTTTCACtgaggacgatattttggcgACTTTTtttagtggg tctgtgagaagggggtgtttttttctacTTGACTTTgcaatttattttca ttctttCTCTTTCTTAGGAAATACATCACAGCAGTATTCAGACGGTGAAC TATGCCAAATATCAGCAACtcgaaaaatgttaaaatcaCTTGGTATCACg aatataaaaaagtgtattattaACTCAAAAAGAGGTAAAACAATTTTGAG TCAGTAGTAAGATTCCCACTTAAGCTTCACTTGGTAAATAAATGAACACG CTTTTGCTCCGGTCCACCCATATACCATATGAGTGGAATAATTAGGTACC ACTACTGGTAAAGAACGCGGGTCATAGTATCTTGTATTCACATAACCAAT GGTGTATGTATGTGTCTGGACAGCACTTTGCATTCCTACTTTAAAGAAGG AGGGATTAGGGAATAGGATCCATTCCCCAATAAGGAGGGTACATGTCATA TCATTCACAATCGTTGACAGAACTACTGTCTAATACTGCCCAATAACCTA TTTCTCAATGCTGAGTCCCCCTTCCCCAGCTttcaatagcgagtttatgt attcgagataaatcgagggggacgatatgaagcaaagttgacatgtctag tccaaaatcaccgtccactttgctcgacgacggtaaaaacaccaagatac cgtcgtctgtttaggtaagCAAAGGTGATATAGAGctgtacatcaactat cgacttttgttttgtatcgatttcacttaccgtctcCCTCGATattctcc gatacataaactcggtaattaTGAAGGGAGGAATGTTATAACTCCCACTG ACCCCACACCAACACTGAAGACGTCCAGGACTGTAGTatattttaaaact gttttgttACCCAGATATTGCAAACCTTGTATCAACATATTTAAACATTG AACCAGAATATACGAGAGGAGTATCACAGAAAAGAAGCAACATTCTCCAA CCTAAAGATAATTGGGATCAAGTGGAAATTGAATTGGACCAAGTGTTCAA AGATATTTTCCACGGAAAACGAGGTAAATGTtgacttttgatgcattaat ttagaacatttttccgaaaaatttaaaacagttcaattctttgcggacag tttgaaaaaactggttaattacccattaaaacttagcactNAGCACACTT AAAACTAATCAatggaatttttggaaaatcatctCATTCGGAAACCATAG CTCTTCCCCTTTTGGAAtagtaccgagtttatgtatgtgtctTTTTTTGG GAAGGAGACGGTAaagttctaatttgactagatcctgaccaactgaggac gacggtataTCAGCTCTTTTACCGTCCTTGATTTTGCGGGTCATAAGCgt gggttattccaaatcgctacagtcactctaccgtcctcaaaagtgcaaac acataaactcgctagtgACGGGGACTGGCAAGGTCTGTCACACAAGGTAA CACAAGGGTGTAGTCAACGCTTATTGAGTAGATTGATTCTTGAGGTTTGC CCTCTTGTATATCCTTTATGAAGCCCGAGCAGCAATAACAAACAGTCACT TCATTTTTTCCATACTTGCTACTTATACTCTTATGATTTTTATTTGAAGC CCTATTACCTAATTGCTGCTCGGgttttttttgtccgttttaccacccta aaactgtcccagtctttttttcgctcctatagacaataaaaaaaggtgta aaaaaggattggatcgagtttagaggGATAACTAAATAATAGTGGCACAc gtctgaccgcgcgactacggtcgaaaaggtgtattcattttcttttgttg aacatttttttaatttagaatttattttataTTGCAGAGCGACAATACTG CTGCAGTCCACTGTGCACGCCCTTCATGAGGAACCTCGGCTGGCCGAATC CCGCCCTTATAAGCtgtgaagacaaataatagacaATGGAATCATAAAAA AAGCATTATAAAAATGACTCAAAGACAACTTTTTCGCATGGACACCCGTT TATAATATTTACAAATCAAAACACTTTCTTGGAGGGAATTGCTACTTTTT TTCGGTATTCATAATACTTGTGTCATACGAAAGCACCACATTAAATCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064697TCONS_00064697Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064697-proteinTCONS_00064697-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_421supercontigscaffold_421:88297..93645 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.06 0.04 0 1.64 1.05 73.03 82.67 65.01 73.72 35.64 59.75 8.89 7.07 4.45 3.77 7.31 10.56 17.91 30.9 13.21 11.78 3.58 6.35 7.6 7.22 7.18 5.88 1.02 0.97