XLOC_040727 (gene) - C. hemisphaerica

Overview
NameXLOC_040727
Unique NameXLOC_040727
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_427:37896..43210-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040727 ID=XLOC_040727|Name=XLOC_040727|organism=Clytia hemisphaerica|type=gene|length=5315bp|location=Sequence derived from alignment at scaffold_427:37896..43210- (Clytia hemisphaerica)
CAGCTTTGTTGGGATTTGTGGCCATTTTTTTGATTCAAAGAAATGCTGAC TCATTGGTCGGAAGGTATACCTCAACTAATCATTGTATTTCATTTTATGA TGGACATTTATCATCTCTGTCCTTGTTTCTCTAAATATTTACTCAGAAGA AGAAGAATATTTCAAGCTTACCCTTATCAGTGACAGAGATCATCAAATCT TTACATTGCTGTTGATTGTTATACAAGTGTGTATTTCTTTTTTAACAGAA CGATAGATCCTGACCGTTTGCGTCGCATCATCAATGTTTTGGAGAACGAC ATCATGGTCAGGTAAGTTCGAGTTGGTTTTAAATTTCATTTCTTTTACAT TTTGTTGTGTTGGGCTGGCAGTGTTATTGATATATTTTGATTTGGGAAAA TGCCGACGCTTCATATTTTTCGTTTAGGTCCATACATGATGTCAAAGCCA CTGATATGGGTATGTCTGTTTGAGTTTTTTGGACCTACCCCGGTGGGGTG GAGGTCCTATAAATTAACCTGTGTTCGTCCGTTCGTCTGTTACCAACTTT TCTCAGGATTGAATCATAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNAGGATTGAATCATAGGAATCTTTTGATTTTTAGTACAAAGGTGCA AAATGGTGGTGGCCAAAATGTGACGGAGCCCGATTTTCGAAAAACAATTT TTTGGGGTAAATTTGGGCTGAAAAACGGCTGAAAAACGGGTTTTTTGGAC TTTGTGAAAAATTGGATCATTAATCTTTTCTGATTTTTTGCATGAAAGTA GGGTACCATCATAGGTAAAAGATGGCTCAAGCAGATTTTTGAAAAAAAAT TTTGTTGACTCAAAAAATGTATGTTTGTCTATAAGAATTACTATTAATAA GCATACATCAATGTTCTTAGTCAAATTACTCAATTTTTTTATGAGATGGA TGTTTTTTTGCTCACGAGAGCTTACTTTTGAAGAATATGTGTGTTTAGAC ATGAAATTTTGGTTGCTTGGCGTGTTTTTATAGAGAAACTGGCCAAATTC GATATTTTTTTATAAGCACACTTTCAATTACTTAGGTATTAGCTTTTCTC GAGATTGGCTCTTTCATTCTTTACGATTTTTTGCACAAAGATGCATAACT ATAATCCCCCGAATGTGACAGAACCCGATTTTCGAAAAACAATGTTTTTG AGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGCTTTTTGGACTTTGT GAAATATTGGATCATTGTTTTTTTTCAGATTATTTTGCATGAAAGTAGGT AAACTATGGCTCAAGCAGATTTTCGTTAAAAAAAAAATTTTCAACTAAAA AAAACGCATCTTTATCTATAAGAATCACTATTAATAAGCATACATCAATG TTCTTAGCCAAATTACTAATTTTTTTGATGAGATAGATGTCTTTTTTGCT CACGAAGTCTTGAATATGAAAGAATATCTCAAGAGTAAGAAATTTTGGTT ACTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTAATAGATCGTCA CTATTTGTGTTCTGAATGATTGTTTAACGGTCATGCTCACGTAGATATCA ATTATAGGTGAATTGATAATATGCGAGTTGCGAGTTGGTCCCGCGAGTTG CGAGTTGCTATCAAATATGCGAGTTGCGAGTTGGTTTTTGCGAGTTGCGA GTTACGAGTTGCTATTTTAACCAAATAAAAGTGCGAGTTGTGAGTTGAAA ATTTCATGTTAAGACATCAAAATCGCGAGTTGCAGATTAAAATCACGAGT TGCAGATTAAAATCGCGAGTTGAAAAATCAAAAGTGCGAGTTGAAAATTA AAATCGCGAGTTGCAAATTAAAATCGCGAGTTGAAAAATCAAAAGTGCGA GTTGAAAATTAAAATCGCGAGTTGCAAATTAAAATCGCGAGTTGCAAATT AAAATCGCGAGTTGAAAATTGAAATCGCAAGTTGCAAATTAAGATCGCGA GTTGCAAATTAAAATTGACAGTTGAAATGAAAATTTGTTTTCGTACTTTC TTAATTATATGAATTTCGCATTTTTGCAGTTTGATTATTGTCTTTATTTT GCAGAAATACGGTATATTTTGAGGGTAAAGAAATATTTTTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATT TTTTTAGACCATCAAGCGTCTGGTTTTCTGAGTTACGATAGTGAATAGTG CTTATCCATATGAAATAATGCGCGCGCGTGCGGGGTTTAAAAAGCAGTAC GGCACAGCACAGGGCGGGGGTTTATTCGTGAGTGTACCTGTGTGTTGATA GCTTAAGGTTAAGCAGCGTCCAGCGCGGAATTCGAAGGTTAACTACTGGT TTTTCAAGAAAAAAATCCAAACTCCCACTGTTGAGAGGAAGTCGAAGCCA CTCCATTTTTTTCGGTTCAAAAAAAAAATTATTTTTCCCGGTATTTTGAT TTTATTACGCGTAAACACTCAACTTGAAGTGAATCAAAACATTCCTCTGA TATTTTTAAACGAATACGCAGAATCAGCATACCTATTTTAAATGCTCCTA AAAGTAGTCGTTTACTTTTTCTAAGTAGATTTTCCCATTAAAGGATAGAA ATTCTGATAGTAATTCTCTATATTCTCTTACTAGTAAATTTACTATGGAT TGCTCCACGTTTTGGTCTATTCGAAAAACCACAAGCGATTATTCAATCAA AAGTGTTCGGATAAACATGGTGTTAAATTTATTATATAAGTGTAGTCGGT CAGTGTATAAAACAATGCTGAAGGTGAGGCCACCCGGAAGGGCGGCCACA TTCGTTCGTAATAAACTTGCGTTGCAAGGGCCCAGTGGATCGGTGAGGCG GGATTTGAGGTCAGCAGATCTCAGTGTGCAGTTCCACTGTTGCGATAAAA GTGTCGGGATTCTCAAAGTAGCGCAAGGACATGACAGAACGAATGAGAGC TATCGAGCCAATGCTCACCACGAATGAACGAGTTCAACTATTATTTCCAA TCTAGGATTTTCTTTCTTTATTCTATCGTGAATATTTATTTTACCACCTA CTATATGAAATTTTAAGATTCGAATTACACCAGTTTCACAGTATAAATAG TTTTCTATCAGCTTTTATGCTTCCAATACAAAGCTTTTCTCCAATTTTGA ACCTAGACATGGCGCCCTAACAACAAAATTATCCACACTGGTTGAAACTC ACACATTAAAATTTGCAACTCGCACTTTTGATTTTTCAACTCGCGATTTT AATTTGCAACTCGCGATTTTAATCTGCAACTCGCGATTTTTATGTCTTAA CGTGAAATTTCCAACTCGCAACTCGCACTTTTATTTGGTTAAAATAGCAA CTCGTAACTCGCAACTCGCAAAAACCAACTTGCAACTCGCATATTTGATA GCAACTCGCAACTCGCAACTCGTAGGACCAACTCGCAACTCATTTGTTAA AAATCCACAATTATAGCAGATTATATATGTGTTAAATGCATAACCAGGTA GGTCCATAAAAGTATCACTTGTTTTTTCATGAAGGATTTCCTTCTTTGCG CATCAAATGGGGAAAAATTTAAACTCAATTTCTCATTTGTAAGGGGATTT TAGTGTGGTCGATGAGTAGAGGGTGGCTAAAACACAGTCTTTTTTTAATT CTAAAACAAGGGAAATTTCATTCATCATTCTCAAAATACGTGAATTATTG TATTTGGGCTCATCGAATACTCGTATTACATTATTGATTGATTTCGTTTT CTAGCATTTCTTTGCACTGAAACCCTACATATTGATAAAAATGTATCAAA GCAATATAACCAGAAATTTCGCGCGGATAAATTTTAGCGATCTGGCGATT CAGCGTGTTTTAGCGAGATTTATTTTAGCGAAAATAGGGAAAACTCGCTA AAACGCTAAAATTAGTCTCGCTAAAATTTCTACGATTAAAGTAGTAGTTT TAGTAGTAAGTAGTTTTTCTGTAACTTTTGTTTTCATTAATATTTTGGTA TCGACTAAAAAGTGATCCAATGATAAGCAGTCGAAGGATCTTTTCATTTT ACAGGCATCGATACTATTCGATTCAAAGCAGAAATCAATTTCGATGGTCG TGAAATCACGAGGGTTCATTTAAATCGTCTCGATATAGACGTGTTGCTCA GGGTACGTGACTTCTTCAATTATTTTATGCAAACCATGTTTAGACATGTT CAAACCTCAGTAGACCTGACAACGATCAGAGTGCTTGTTCACTTTAATCA TTTCCACTCTAACAATAGGAAACAGTAAAGAATAATTTTGAGGTTGAAAA TGAAAATCTACTAAGCATATTGAGCTTCAGCCAATTTCCGCTTTTTGAAA GACTTGTCTGTATTTCAGGAGTGTATTTTGAGCAAAGAAAACATTCGTTG TTTTTTAGGAAGCGAAGAAGATCAACACAACGACAGAGTTGGAGATGTTT ATGTTGGAACACGGTGAACAGATCATCGATGTCCTCGGAACTCAAGTCGA TCGCATCGAACGAAACATCAAAAGTAAATCACCTGAAGTCAGGCACATCG ATCTCGAAATCTTATGATGACGTCATGCATTTTAATCTTCCACTTATTTT TTTGTTATACTTGTACATAGGTTTTATACATTATGAATTACATTGATAAT AATATGCCAAAATAATGCCAAAAACCAACTATTTTTTTTCCATTTTTCTC TTCCCATTTTCTTTGAATACTCCAGACTAGCTAGCAAAGGACTTTGTGAA GGACGAAGAACTTTCGGCAAAAAAAACAAAATGCTGACAACTAGATAACC TTTAAGGTCTTTAGATTTCTTTTATAAAATCTATCAAAGGAAATTCTAAA GGCTTGGGGACACGAGAAGTTTTTTTTTGGCGTTGGTGCAATNGGGTACG TGACTTCTTCAATTATTTTATGCAAACCATGTTTAGACATGTTCAAACCT CATCAGTAGACCTGACAACGATCAGAGTGCTTGTTCACTTTAATCATTTC CACTCTAACAGTAGGAAACAGTAAAGAATAATTTTGAGGTTGAGAATGAA AATCTACTAAGCATATTGAGCTTCAGCCAATTTCCGCTTTTTGAAAGACT TGTCTGTATTTCTGATTTTCTGGAGTGTATTTTGAGCAAAGAAAACATTC GTTGTTTTTTAGGAAGCGAAGAAGATCAACACAACGACAGAGTTGGAGAT GTTTATGTTGGAANC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064948TCONS_00064948Clytia hemisphaericatranscript
TCONS_00064947TCONS_00064947Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064948-proteinTCONS_00064948-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_427supercontigscaffold_427:37896..43210 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.26 34.92 35.13 41.27 62.5 53.13 65.91 76.07 65.09 62.3 60.83 68.05 66.32 79.54 45.86 57.55 60.89 54.03 52.63 60.93 49.22 41.7 51.13 43.94 85.57 69.98 38.89 45.9 52.22 55.59