XLOC_040765 (gene) - C. hemisphaerica

Overview
NameXLOC_040765
Unique NameXLOC_040765
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_428:467660..471960+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040765 ID=XLOC_040765|Name=XLOC_040765|organism=Clytia hemisphaerica|type=gene|length=4301bp|location=Sequence derived from alignment at scaffold_428:467660..471960+ (Clytia hemisphaerica)
gcggaaatttcATTTCGcaaatggccgaaaaagttttctcagagtgaatt
taatttggcggatagctGGATAAActaaatttgacgggaatttaatttcg
cggttgcaggTAGTTTGCCAAAATCTtgagttcacaaaaaaagcttcaaa
taagacaaaatagaacagatttacgctgtcattcgccaaaattagaaaTG
TTCAGGATTTTTGCCGCTCGTCAAAACGAAAGACTTTCTTGGTCAAAATT
AGTGTCGCCAAAATAAGGTATCTCTCTAGCCAGATTCAGCCAAGGAATTA
GATTAATTTAATCAAAGAAGAATTCGAGAAACGAGAATATTCCCTTCCAG
GTGCATATTTGTATTTTGAATTGGAGAAATATTACAAGGTGGCAATAACT
TAACGATAACGACGTAAGCTGACCAAATTGTGTTTCTTCCATGTGGCACG
TCTTGAAGATGACTTGACCTTATTATAACCATGTCCTTTGGCAATTCCAC
GGTTTTTGCGTCCAGCAGAAGTAAGTCCTCGTAATTCACGATGCTTATGT
ACGCTTTTGACGATCCAGTTGATGCGTGGATCTCTTCGGATAGCTTTATG
TTGTGGGTCGACCATGATTACTTCGAAATATTTGAAGGTGGAATCTTGAG
CAATCCAGTATGAGTTCAAGACACGGAGACTTCCGCAGTATCGTCCAGCA
CGTTCCTGACatgtaaaacaacaaaaattcatAAGAAAGAATTCTAACCT
GTTCTAATCAATCAGATATATCAGGTCAGACCTTCAAAGTTCTGTTCGTG
TCTCAGATCATGTAGAAAACGCATCACTGGATAAGTCAGTAGAACGGAAA
TCATAATTTTATTCATCATTGACAAAATGTTCAGAAAGATTTTCAGAAGG
GACAGGAAGGGAGGTCAAACTTGTTGATTTTATATAAAGATTTCTGTCAG
ATCATGTAGAAAAACCATCACTGAAGATGTCAGTAGAACGGAAATCACTT
TTTGTTCATCATTCAGAATATCAAATACGCTTTCAGGCATAAACCCTGGT
TATCCAGATGATGTTTTTGGTTTACCGCCTGGTCGTGCTAAAGTAATTTA
CATTCCAATATCTGAAGGCAGCGCATGTAAAGCCTAAAATCTGTCTACCC
TGGGTTAATGAGCATTAAGGTAGACCAAGCTGTAAATATCAGAAACATCA
AAAGACCACACAGCCAATTCTCAAGTGAAGTTAGTaaacaaatgataaaa
tacaataaaaagcagttaagatttttttttaaattaccaaAAATAGTAAA
ACTAGGACATCTCAAAACCCTGCATTTGTAACAATTCTTGTCTCAGCTCA
TGTAGAAAATGCATCACTGAATAAGTCAGTAGAACGGAAATCATCATTTT
ATTCATCATTGACAAATTTCAGATTCCCAGAAAGGGGAAGTTCAACTTGG
TTgactttattaaaaaatttctgTCAGATCATGTAGAAAAACCATCACTG
AAGATGTCAGTAGAACGGAAATCACTTTTTGTTCATCATTCAGAATATCA
AATACGCTTTCAGGCATAAACCCTGGTTATCCAGATGATGTTTTTGGTTT
ACCGCCTGGTCGTGCTAAAGTAATTTACATTCCAATATCTAAAGGCAGCG
CATGTAAAGCCTAAAATCTGTCTACACTGGGTTAACAAGCATTAAGGTAG
ACCAAGCTGTAAatatcaaaaacatcaaaagacCACACAGCCAATTCTCA
AGTGAAGTTAGTaaacaaatgataaaatacaataaaaagcagttaagatt
tttttttaaattaccaaAAATAGTAAAACTAGGACATCTCAAAACCCTGC
ATTTGTAACAATTCTTGTCTCAGCTCATGTAGAAAATGCATCACTGAATA
AGTCAGTAGAACGGAAATCATCATTTTATTCATCATTGACAAATTTCAGA
TTCCCAGAAAGGGGAAGTTCAACTTGGTTgactttattaaaaaatttctg
TCAGATCATGTAGAAAAACCATCACTGAAGATGTCAGTAGAACGGAAATC
ACTTTTTGTTCATCATTCAGAATATCAAATACGCTTTCAGGCATAAACCC
TGGTTATCCAGATGATGTTTTTGGTTTACCGCCTGGTCGTGCTAAAGTAA
TTTACATTCCAATATCTAAAGGCAGCGCATGTAAAGCCTAAAATCTGTCT
ACACTGGGTTAACAAGCATTAAGGTAGACCAAGCTGTAAatatcaaaaac
atcaaaagacCACACAGCCAATTCTCAAGTGAAGTTAGTaaacaaatgat
aaaatacaataaaaagcagttaagatttttttttaaattaccaaAAATAG
TAAAACTAGGACATCTCAAAACCCTGCATTTGTAACAATTCTTGTCTCAG
CTCATGTAGAAAATGCATCACTGAATAAGTCAGTAGAACGGAAATCATCA
TTTTATTCATCATTGACAAATTTCAGATTCCCAGAAAGGGGAAGTTCAAC
TTGGTTgactttattaaaaaatttctgTCAGATCATGTAGAAAAACCATC
ACTGAAGATGTCAGTAGAACGGAAATCACTTTTTGTTCATCATTCAGAAT
ATCAAATACGCTTTCAGGCATAAACCCTGGTTATCCAGATGATGTTTTTG
GTTTACCGCCTGGTCGTGCTAAAGTAATTTACATTCCAATATCTAAAGGC
AGCGCATGTAAAGCCTAAAATCTGTCTACACTGGGTTAACAAGCATTAAG
GTAGACCAAGCTGTAAatatcaaaaacatcaaaagacCACACAGCCAATT
CTCAAGTGAAGTTAGTaaacaaatgataaaatacaataaaaagcagttaa
gatttttttttaaattaccaaAAATAGTAAAACTAGGACATCTCAAAACC
CTGCATTTGTAACAATTCTTGTCTCAGCTCATGTAGAAAATGCATCACTG
AATAAGTCAGTAGAACGGAAATCATCATTTTATTCATCATTGACAAATTT
CAGATTCCCAGAAAGGGGAAGTTCAACTTGGTTgactttattaaaaaatt
tctgTCAGATCATGTAGAAAAACCATCACTGAAGATGTCAGTAGAACGGA
AATCACTTTTTGTTCATCATTCAGAATATCAAATACGCTTTCAGGCATAA
ACCCTGGTTATCCAGATGATGTTTTTGGTTTACCGCCTGGTCGTGCTAAA
GTAATTTACATTCCAATATCTAAAGGCAGCGCATGTAAAGCCTAAAATCT
GTCTACACTGGGTTAACAAGCATTAAGGTAGACCAAGCTGTAAatatcaa
aaacatcaaaagacCACACAGCCAATTCTCAAGTGAAGTTAGTaaacaaa
tgataaaatacaataaaaagcagttaagatttttttttaaattaccaaAA
ATAGTAAAACTAGGACATCTCAAAACCCTGCATTTGTAACAATTCTTGTC
TCAGCTCATGTAGAAAATGCATCACTGAATAAGTCAGTAGAACGGAAATC
ATCATTTTATTCATCATTGACAAATTTCAGATTCCCAGAAAGGGGAAGTT
CAACTTGGTTgactttattaaaaaatttctgTCAGATCATGTAGAAAAAC
CATCACTGAAGATGTCAGTAGAACGGAAATCACTTTTTGTTCATCATTCA
GAATATCAAATACGCTTTCAGGCATAAACCCTGGTTATCCAGATGATGTT
TTTGGTTTACCGCCTGGTCGTGCTAAAGTAATTTACATTCCAATATCTAA
AGGCAGCGCATGTAAAGCCTAAAATCTGTCTACACTGGGTTAACAAGCAT
TAAGGTAGACCAAGCTGTAAatatcaaaaacatcaaaagacCACACAGCC
AATTCTCAAGTGAAGTTAGTaaacaaatgataaaatacaataaaaagcag
tagttaagattttttttttaaattaccaaAAATAGTAAAACAAGGACATC
TCAAAACCTTGTATTTGTAACAATTCGTGTCTCAGCTCATGTAGAAAACG
CATCACTGAATAAGTCAGTAGAACGGAAATCATCATTTTATTCATTATTG
ACAAAATTTCAGATTTCCAGAAAGGGGAAGTTCAACTTGGTTGacttaat
taaaaaatttctgtCAGATCATGTAGAAAAACCATCACTGAAGATGTCAG
TAGAACGGAAATCACTTTTTGTTCATCATACAGAATCTTGGATAGGTTTT
CAGGTATAATCCCCgcaaaaaatacaataattgTTAGGAAAAATATgttc
agtggtcaaagcaagattttcgtctgagacggaaaatggattttacacag
c
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065025TCONS_00065025Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_428supercontigscaffold_428:467660..471960 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.05	0.07	0.04	4.09	3	2.84	2.18	0.98	1.56	0.36	0.99	1.04	0.87	0.89	1.43	1.65	0.86	0.25	0.86	1.71	1.65	0.66	0.36	0	0.82	2.6	1.41	1.52	1.38