XLOC_040774 (gene) - C. hemisphaerica

Overview
NameXLOC_040774
Unique NameXLOC_040774
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_428:109685..113141-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040774 ID=XLOC_040774|Name=XLOC_040774|organism=Clytia hemisphaerica|type=gene|length=3457bp|location=Sequence derived from alignment at scaffold_428:109685..113141- (Clytia hemisphaerica)
AAAAAAACAAAGAAATTCGAGGATTTCAAGGGGCATTGTTATATTTCCAT
ATATAGCATATAATAAGCAAAGGCAAAGGTACGAGAGGTAGAGTATTGAA
AAAGCGTCAGTAATAAAAAGGAGAATTGTTTTATTGACTAATGTATATGG
CATTTTTGAATGATTTTGTTGAAAAAGTTGAAGTAAAGGAAATTTTAAAA
TCTTCTTCAGAAAATTATTGTAAAAGTGAGAGGATCAAAATACAGAAAAC
GTTATTTGGATGATTTTTTCCAATGTCGACCCAAATTAGATCCCCTATAC
TTAAACAGAGAAGAATAGAACTTATTCGAGTGGAACATTTTAGTACGAGA
CTAGTACGAGAAATCATATCTATGAAGAATATTAAAATCAAAAATGCTGA
TAATTTCATATTATATTAACTCTAATCTTTTATCAAATATTCAAACTTTT
AGAGACTTAACGCACACACATACACTTCCTTGAAGAACACATGATCCGCC
GCATTGCGTGGTAAGAAAATGCAGTTTTACAGGGTGTTACTTCTGGTAGT
GATACTAAACGTCATTGCTCAAAACCATTGTCATCGAAAGAATCATTCAA
GAAAGAGGCGTATCAAAAATGGTAGCGGAGTTGCGGAGAAAATTGATTTG
GTTTTCATTATCGACGAAAGTGAAGGAATGTCTAAAAATGATTTTGAAAT
TAGTGTCAAAGCAATGTACAAACTTTTGAAACATTTCAGTATTTCACCTG
GTACGACCCGTGTTGGCTTATATACTGTTGGTCGAAAATTCAAGAAGCAT
TTCGAGTTCCGAGATCATGTGAACCGGGAATGCGTCATGAAAAGCATTCG
GAAACTTGTCTTAAAAACGAGCCCGAGGAACAAAAATTTCACAGAGAACC
TACGTACAGGGTTCGATGAGATCAAAGAGAAACATACAGATATTGAAGGG
CAGCGTCTAATCTACCTGTACATAACGAATAAGCCAGAAGATGTCAAGCT
GATTAATAGTGAGGTTGAACTGGAAAATGGAAGTGAAATGACTGTCCTCT
TGCTGGAAAAGGCAGTTCTGCTGAATGAAAAACATCGACACCATAAAACG
AAAGCGAAAGAAAGATCTCACAGTAGCCATCATAAGAAAGAAACATCAAA
GAGAACTCCGGTCAGTGAAAAGCCATCTAAAAAGGTTACCATCGAAAGAG
CGGGTAGCAAAATACAAGTCGTCAACCTACCAGTGGAAACTGAACACATT
CTATACAAGATTAACGTAGAGAATAAACAATATGGTGTTTGTGAGCATAA
AAAAGATGGTAGCCCAGTCATGGACGAATGTGATCGTCATTGCACATGCG
TGAACCAGAAATTGACCAATTGTTATCGATTACGTAAAGAATTCACGTCA
ATGACGTCAGAAGAGCGTCGACGTTATTTGAAAGCGTATAAAACTCTAAC
GACGAAATCACCTTATAAAGACACATACGAACGCTTCATATTCATGCACT
ATAAATACTTTTGTTGGGGAATTCATAACAGAGAAATGTTTTTACCATGG
CATCGATGGTACCTATCCATAATGGAGGATTTGTTGCGACAGATAGATTG
TGGAATTACAATTCCATATTGGGATTGGTCTTATGCGAGTCATGATCCCT
GGAATCGAACTAATCTGTGGCGATCTTCGGATGATGGGTTAGGTAAGAGA
GGTATTTGTGTGTGTGAGCTCTTTACAGGCCTGAATCAAATAACATATGT
AGAAAAAATAACAACCATGTTTAATTATGGTCTTTTTTAGTTAAGTCGAA
TAGTCAGTAACTAGTATCAAACTTTCCAAGCATTCAAGAAAAAATAGCCA
ATCTGGTTTTAAATTAATNATCAAATAACATATGTAGAAAAAATAACAAC
CATGTTTAATTATGGTCTTTTTTAGTTAAGTCGAATAGTTAGTAACTAGT
ATCAAACTTTCCAAGCACTCAAGAAAAAATAGCCAATCTGGTTTTAAGTT
AATTCGTATTCTCCATCGTTTTCTCTTAGGTCCCAATGGCAATCGATACA
AAGGTTATTGCGTACAAAAAGGTTTATTCCGTGAATCACAGTGGAAAACC
CCTTACTGGGAAGACCCTATGGATATCGTTCTCTCATCCGCTGACCAGTT
GGGCGGAGATATTGAAGACCAAAGGGGACATTTAGCTTTCTGTTTACGAA
GGGCATTCAAAGGTCATACGCCTAGTTATATCAGCGTACAGCGTACATTG
TTGCTGCCTGCTCGTCATTTCAAAGACTTCGATATTCAGATGCGACACAA
CTTCCACGACCGAGTCCACAACACCATAGGTGGTACCATGTGCACCCATT
ATGCCGCAGATACGCCCGAATTTCATTTCCACCACTCCTTCTTGGATAAA
ATTTGGTTTAAATGGCAATCCATCAGCTCTGATCATAAATGGGTTCATTT
CTTACAAAGGAATCACACCAAAATGTTAGGAACTGAATATAATCAATTTG
AGTATACAAATTGTGATAATCTACCTCGTTGTATTAAAGTCACATATAAA
GATTTTCCTAATAGAAAACACACTAAAAGACACAGAGAAAGAAGATCACC
CATAGATATAGATTCAATGGGACGAATGACGAAAGATTACTGGCAGAGTT
ATTTGAATGACAGCTGGTATTCAAGTTTTCCAAATTGTTCTCGATCGAAG
ATAGAGAAAAAACGAGCCAAATTTTTACATTCGATTTTGGATGGTCCAGG
CGAGGCTTCCGCTGAAGATTTAAGACATAAGCTTTATGGTTGATGTTGGG
AAAAGACTTGAGTTTACACATCATGTGTGTCAGCTGACTGGTTGTAAAAA
CAGCGCTATTGTGTGTGGATCGATATTGATGAAAGACTTTTCTTTACGAT
GGATGCTGACAGCATTTGTATCAAATGAGACAAAATTATAGAGGACTTTT
GTAGACTTTCAAGGAATCTGTTTCGTTTCAGATTTGGACTCATGGAGGTT
AACTAAACATCACAAAAATTATGATAACTTTTACATTCTTTTAATATGCT
AACACGGGTGCCATTACATTCATGTATAACCAAAAGGTAAGAAACCTTCA
TAGACATTTTTATGGGAAGATAGGATTGTCTTTAGATTCTTAAATAACCA
TTTGAAATTCCAAGAGAATCGCAAGCTCGTTGGTGAACGTTGTCATTGTC
GTCAACATAAATCTGAAAGTTCGGATTTGGCGATTGATCTGTTTGTCGCT
AGTTTGCTGGAATACAATTTATTACATATCATTTTTCAATGGTAGATATA
ATTTCATCATAAAATATATGATCCATAATAATTGTACATTTAAAAAATTG
AACAAACATTTTGAAAATCTCAAAGATTTCTATCTATATATAAACTAAAA
ATATACATTAAATTTCTAGATTACATAGAAAATCATGTCTAATCTACCTC
AGTAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065037TCONS_00065037Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065037-proteinTCONS_00065037-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_428supercontigscaffold_428:109685..113141 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01	0	0.02	0.02	0.23	0.16	1.69	2.46	0.85	0.54	2.11	2.98	6.7	4.95	4.18	8.44	3.38	3.91	0.03	0.36	3.54	3.52	2.57	2.97	3.32	4.93	0.94	0.2	0.08	0.03