XLOC_040974 (gene) - C. hemisphaerica

Overview
NameXLOC_040974
Unique NameXLOC_040974
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:247978..255325+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040974 ID=XLOC_040974|Name=XLOC_040974|organism=Clytia hemisphaerica|type=gene|length=7348bp|location=Sequence derived from alignment at scaffold_439:247978..255325+ (Clytia hemisphaerica)
AACAGAAACTTGTTCGCAAACTTTGTAAGTAAAGCACTTTTTTGTGTGAC
CCCAGCTGCCTGACtatgaatttctattgttttcaagtaaaaatttgaaa
attcaaaatcgattttgagaGTGTGAAATTGCCATTTTCGGGGTTGGGAT
TTGCTGGTTTGCCCTGTTAAACATCTCGAGAAATACcttcaactgctcca
acttgggactattgGTTGAAACATGTCGAAACATAGGACTGTTGAtattc
tggcctgtattttcacttactgttaaatctctttggcaacaaatttgttt
tgataactccaccaagtttatcaatcatactttctgtcataacatgttgc
gataactttcactgatatgATAGAGtgccctttttaattttttgttttca
ttcaaaatgactgcACGCCGAttagagaattagagaacgcccgccccCTA
ACCGCCTATAGCctaatgggattaacaaataaccaGTGTGTTACTTGCCT
Cgggagtgacgtcaaacgctccatcgtatcaccactaatttggtcttctt
cgtacCAGACAGTCGTGTGTGTTCCACTATGGATCTTTTTAATATTTCGA
TTTAGGAGCCTACTCGGTGCAGAAGAAATCGTGTATTTCTTAATACACCC
Ttaattaactcaaatcaaatgactttggaggttcggtgaaatggtggccg
aattgccgtcccatgttttgtcagatagttaGAACGTAGTGGTCTAAGAA
Aacggctattcttttttagaatcaaccttacaatctagtttttatattta
taaaaactagattgctgacgtgtggaaaggaatgtcggcgtgactgatcc
ttttgtttcaataataacatcaaagcgggaactaattttcttctcgtttc
tttctctcctttttctttctcgtaAGTTCGCGCTTTCCCTCCAAGTCTTC
AAGTGTGGTTAGCTCAATCGGTTAGAGCGTCTATCCCACAAGCACGGGCT
TCCGAGTTCGATCCCactgggtgtcaaatttttcaattcttcaaatttct
ttttttaattctctttctattataatgaaggtcaatcaaacaagtaacta
gcatatattacctccgctctctgtgtaaggtttagataagctatgatagc
atcacttaataagaactttttgaaattttttttttcttcaatcttttttt
taccacaagcaattattcaaggctgagatatagaagaacgggaataggcg
tttgcgcctgcgtttggtgactgacagtttcagtttcactactttcactt
tcactttcagccagcgagtgagcgagcgattctttgtaagagaatcgtca
aataacttctttcagaatcattctcgttttatactttaaagacagaatga
taattgatttccgggtcaaaatgtttgacacttgatccaatcgtttgctt
atctttcttgcgtggtcgTCATTTGAATTTTCATTCCTTTCCAGatgtca
gcaatctagtttttataaatataaaaactagattgtaaggttgattctaa
aaaagaatagccgtTTTCTTAGACCACTACGTTTTAGATCAGTTGACGGT
AGaattcaataattttcaaatttattattATCAAGTTTTCAAAAGTGTAA
TTGATTAGGTTCTTGCCTCAAAGTAGTGTTTTGCAGCAATGTTCAATCTT
TCCTGGAGGCTACGTGCAATGAAGATAGGGGTCTACACACATCTTTGATA
AATAAATCCagatttgggggggggggtacaagGGGCACTTCAAGAAAATG
CATTTTGCTGTGTCTCattggcgcaattggttaggcattgggtttgtaaa
ccaaggttgcttgcattttgATGGTTCGAGCCGGGTTAGGAGACCTNCAC
GTAAAATTATTTGCGAGTGCTAAAATAGCACGCCTAAATCAAGCAAAAAC
AGGTATTGAAAGTCCAAATTTAAGGCTTGCAAGTGCTATAATGGCACACA
CAGGCTTTTCTTCATGGCCAGGCCTGGGCTAAGTGCCTACACACATCTTT
GATAAATAAATCCAAAATAGGGGGGGGTACAAGGGGCACTTCAAGAAAAT
GCATTTTGCTGTGTCTCattggcgcaattggttaggcattgggttcgtaa
accaaggttgcttgcattttgATGGTTCGAGCCGGGTTAGGAGACCTATT
TCACTGAACAAGAAAACTTCAGagaaatacttagaaaacagttacaAAGA
CTCTAGAGTAGAAGATAATAaaggaccttgaaaaccttgaaaaccttgaa
aaatctttaaaaacctTGCAAAGCACTACCCAGTCAttcgaaaagtaaga
ataagtaaaaaactgcctgcggcgctaaacctTATAACATTTAGAGAATT
CCATATTTCTGTTTCTGTTGTGATTCTGTCGCAAGGAATGCAacatattc
ttttatcattagctgagtttttgtcactaattttccGTTTGCATGAGCCT
AAAGAAATCGACTgttccccaattttcaaatcgcttcagagcgtcttgga
ataatggccatttatcaataaaatttcaaggatTCCTTTAGCCATTAGaa
agagtcaaaatcaaaattttctatcGTGCGCCTCCTTGGTCACTGTAAAC
AATTGGTTttgcttctaattctttatttctacagttgGAAGACTAAGGAG
CTGGAGTATTTCTTTTTGTGGTATTGTTCTCGAGAGGGAGATAGGAATAG
Actatatcggctttccgaattctccccaaatgattacccatgatgcatgg
tgcaaaaaaattcacggtatcgactttccgtgaatttttttgcgcaatgc
atcatgggtaatcattcggggagaatttggaAAGCCGATATtcctatttc
tatttctttattagcatgaactttttacaagttattttcgctaatggaac
aaaaaataaataaatgaaaaaatattaagtaatTTACAGATTATAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTTCTCTTCAAATTTATCACATTCTACA
ATATTTACAATATCATCAGGTAGACGGTTCCATAAGCAAATTGAACTTGG
AAAGAATGATGAGCTATATACTTGATACGATATCGTCTATTTCTAACTGT
GGAAGTAATTCCCCTGGCACCAAAAGCAAATAAATGTTATTTGAtgtcct
ctatttttctttcacctaccactctgaagaaaaaccaaaattcCTGTAAA
GAGCCATGTCAAGtaagtatcaaaaaaccttgaaaagtgccaaagttttg
gccaaaaaacattgaaaaaccactttaaaatgaccaaaaaaatcttacag
ccaattcgattgacttccaaatttgccatactcaccaactttgccaaatc
tacaatttcaatgtcaaaagatcacagcttcatggcaaatttgtacattG
CTACGCCGCCATTATGATttccgttttgtgatgcttagtcagcagttttc
tgtcggcgtttATAAAGCGAacaattttttaaccaatcaaattgccgatc
ggcattgttttgctttagcattggaaggtcttctattttttaaaatcttt
ggcaaaagtggcaaaattggagcgaaaagaacacaggtctcgtgggaaca
gtgttttgcatggagacgtatggaggtaagttccaaaaataCCAAGAATG
CCAAattcaccacatcttttttatttggcatttatggcactcaaattttg
ccacatttgccaaatttaagtcaatcgaatgcaaaataattggcaatcag
ggcAAAAGTGGCATATTTTGaggtcaatcgaattggctgttaaaaacctt
gaaaatccccaaaaaaaatttgtagacATCCtgataaaagatggctaaag
TGATTTTTCCCGGAAAATGTTTGTTTGCCGTAAATAATGGATTTTTGTAT
TTGGGGAAAttaattcccttttaccatttgcaaggaaattaagctttctc
AGGATCAGCTGattagtttttgctgatttttggcacaaatatgcaaaatg
gcaatgcccaaaatgtgacggagccagattattaagaaaaacttttttgg
gcaaatttgggccaaaaactgcttaaaaatagggttttttgggcctgaat
ggtttaagtgattttcttatttggggaaattcctttttaccattttacat
tattcaacacaagctttatttttccattctgaattctTGTaaaattattg
tcactttttcttattttcatctgatgttaatcattaggtaggtccattca
gcctGTTGCTTGTTCTTGTTTCTGCGGCGTCTCTGCTAGCCGTTACTCTT
ATCATTATTTNttttccattctgaatttttgtacaattattgtcactttt
ttcttattttcatctgatgttaatcatcaggtaggtccattcagcatgtt
gcttgttatcagctgaaattgatagaaaggttgaaactgtttttctttgc
ttttagtggtcagagaggaataatccttttttaatcagtgattcaagctt
tcatattattcccgtctctaaagaagggtgtcgtaATTAGActagggatg
tcgatattagaccaacttacggtatactATGTTTTAGTAGACTGATCACC
AGCTTAAACATTGCTGAATGACTTgtcattttaatttaacttttcattat
catttagaaaaaaatgtcttcctcagaaaatgaaagtgactggTCGGATG
TagaggaagaagaaaaggatagTGAACATCTCAAAGCACTGTGTTTATTT
TCAGAAGCTCAATTTCAATCTATTGAGGATTGTTTTGGTCATATGAAgga
taaatatgattttgatttgaaagcttttatccgaaaacttaaaattgatt
tctaCAATTATgttaaatttatcaattatGTTCGAAAAGAGAAGCCTGAC
CCATCAGAGGTGAAGAAAATGGTTTCCACGTCTTTATTTGAAAAAGATTG
TTATTTGCAGCCAGTTGTTGTCGATGATTTACTACTTCAGTTTGATGTAG
ATGAATTACATGAAAACAATGTAGAGATATCTACAAATGGCTTTCATTTG
GAAGACAAATTAGCAGTAAGTGAAAGAAGAGCTCAACTGGCTGAAGAATC
TTTAGAAAGAACCATTTTGGATCTTGAGAAATGTCGCAAAGAGTTGAAGA
AGCAGTTGTTGGGTGCTGCAGAAGAAATGGTGACACATTACAATGAAACC
AATGAAGGATACTTTGCATCTTATGCTCATCATGGAATCCATGAAGAAAT
GTTGAAGGATAAAGTACGCACTGAATCTTAtcgtgatttcattgtaaaga
ACCCCAAAGTTTTTAAAGATGCAATAGTGCTCGATGTTGGCTGTGGTACA
TCGATTTTATCAATGCTTGCTGCGAAAAGTGGTGCTAAGAAAGTCATTGG
TGTTGATAATTCTGATGTAGCTCATCAAGCAATGGACATTGTCGGGGAAA
ACAAATTAGATGATATAATAACAATAATGAAAGGAAAAGCAGAGGATATA
AATATGCCCTCTAAAGTTGATGTTATTATTTCTGAATGGATGggttattt
tttattgttcgaaAGTATGCTTGATACAGTTTTATTTTGCAGAGACAACT
TATTGAATCCTAATGGACGCATTTACCCTGATAAATGCAACATTCAGTTG
TCAGCTATGGCTGATGATGAATATTATGAAAGTAAAGTTAAATTTTGGCA
GAATGTCTATGGGTTCAAAATGTCTACAATGATGACAAGCTCTATTGAAG
AGCCTTTGATGGAGATagtaaataaagagaaaattatATCGAAACCAGCT
GTAATCAAGGAATTTGATTTAATGAAGATTTCAGTCAAAGACCTCGACTT
tgatgcattttttgaaattgagatTACCAAGAGTGGAATTGTATCATCTA
TAATTGgttattttgatatattttttggGGATAATTCTTTTGAGACTCCA
GTTATGTTTGGTACCGGTCCTCATGATACGCCCACTCATTGGAAACAGAC
AGTTTTCTTCCTGAAAGAACCTATTCCGTGTGAATCAGGAGAAAAGTTAA
AAGGAcgtattttttgtaagaaaaacaagaaagatACAAGAGGACTTGAC
GTTGCTCTTatctttttcaagaaaaatagcGATAGTGATATTTTATTGAG
ACAACACTATGTAATTGCTTGATAATCTTCATAATAAGTACAATTGTCAT
AAAgataaaattattcttttttatttaaaatatacCCTTACCTTTTGAAA
CAGCTTTTAGAAGGgaattatttttgttaaaatcctACCTactaaagaaa
ttgaaaaaaaaaactatcgAAAGTCTGTTAAAGCTCTGTCACCATGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065351TCONS_00065351Clytia hemisphaericatranscript
TCONS_00065352TCONS_00065352Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065351-proteinTCONS_00065351-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:247978..255325 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRMT3protein arginine N-methyltransferase 3 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.65	27.47	8.86	6.97	36.47	23.9	22.59	25.6	14.63	13.4	10.45	9.63	11.53	12.38	12.36	12.27	10.65	10.66	2.05	3.22	16.99	15.6	82.56	73.72	10.88	17.31	8.37	8.14	42.28	47.77