XLOC_041416 (gene) - C. hemisphaerica

Overview
NameXLOC_041416
Unique NameXLOC_041416
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:803307..806976+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041416 ID=XLOC_041416|Name=XLOC_041416|organism=Clytia hemisphaerica|type=gene|length=3670bp|location=Sequence derived from alignment at scaffold_451:803307..806976+ (Clytia hemisphaerica)
CATAAACATACATAAACGACTGAAAGTTGttgaaaaaagttattcaaaGC
TGCGAACTTTGAGATGAtgttgaaatcaaaaatttaatttaattgagTTT
CAGAGAGTTTCACGAAGGCTTTAAAGGGGGATCAATCACATACAGTAACA
TAAGAAGTCATTTCGAGCACTCAAAGCTTTAAAAGATCGATTCTGTCGAA
TTCTGATAATAAAAAGAGTCGACTAACACAGGCGCGACAATGTTTATAAT
TTTATGTATTGGTGGTCTCATTGTCGCTACAGAGGCGGTTTTACGCCCGG
GTGGAATACCAAACTCCACTTACATAGCTTCGAAAGACACATGGGTGTGC
CCCATTATCAAAGAAGAGGGCGTTACTGGCAGTTTGAAGAAGGTAATAAT
AAGCCTCCTTCCTCTCTTCCTCCCTTCCTCCTTCCTGAATCTGTATGAAA
AGGTTTTTTATCATCACCCCAGACATTGTATGCTTTGCTAAAGTGCGTGG
TTGAAGTTTTTGCCACTGTTTTACGAAACAGACAATGAGTAGTGACAGCA
GTGAATCAAATCATTcatcgaaaaatttttgttttctaaacaTTATATGC
TTTAAAGAGAGACACTCGGCTAAATTGTAATTGAAGATTTGACAGTGTTT
AGCGTGACAGACAGTGGCATCGAATCGAATCGAACTTCAACTTTTAAGAA
GATATTGTTTATGTTTTCTAAACATTATATGCTTTAGAAAGAGAGACACT
TGGCTAGATTGTAGTTGAAGTTTTGTCAGTGTTTAGCGTGACAGACAGTA
CTCTGTACCaaagtgtatctcacgtttatcgcttcgtagtactctatggc
aatgaattttgaaataaaccaTAGATACTGGGTTTGTGTNTGCAACTTTT
AAGAAGATATTGTTTATGTTTTCTAAACATTATATGCTTTAGAAAGAGAG
ACACTTGGCTTGTAGTTGAAGTTTTGACAGTGTTTAGCGTGATAGACAGT
AATACTCTATACCAAAGTGTAtatcacgtttatcgcttcgtagtactcTA
TGgcaaagaattttgaaataaaccgTAGCtactgggtttgtgtacagaca
agacAGGAATCGAATCGAACTTCAACTTTTTAAGAAGACTGTTTATGGTT
TCATCTTGTTAGGCATCACTGAAGGTCACTCATTGCCCTGTTGCATCAGA
TGATGGGTTCCGATGTCCAGGATATATGAATCCGGTCGATTTCGTTTTGA
CCAAAGGAGAAGAAGCTGTCATTATCAAGGAAGGAAATAAATCTTACTAC
CAGACATCACAACTTGCGCAGTTCTTTGGTAAGCATTCGTCTTCCTTCTT
ATCAAATTCTACATATAGCTACCTTAGTCCAAGTACCCcaaattcaaaag
gggcctaagtccaggtACACCAAAATCTCAAAATGGGCCTAAGTCCAAGC
TCCCcaaattcaaaaggggcctaagttcAAGTTCCCCGAATTCAAAAGGG
TCTTAAGTCCAAGCTCTCCAAATTCAAAAGAGTCCTAAGTCCTAGTACCC
CTAATTCAAGTTCTTTGGTAAGCatttctggcgagaaagtcactTCTGGG
CTATTATTAAATGCTTTTTGATCctcttaagtctagtgttaaaactctac
acttccAATCTAAGTTAGAGCGCTTTCAAATCGTCTGTGGCTATAAGATC
TTGtggggatttcccttttttctcaaatattatgacgtTGATTgtacctt
aattcaaaagaaGCCTAAGCCAATCAACCccaattcaaaaggggccttaG
TCCAAGTACCCCCAATTCAAAAGGGATCTAAGTCCAGATACCCCAATTCA
AAAGGGGCCCCAAATCTAGGTACCCCAAAAtctcaaaaggggcctaagtc
caagTACCCCAAAATCTCAAATGGGGCCTAAGTCCAGGTACCCCAAAATC
TCAAAAGGGACCTAAGTCCAGGTACCCCCAATTCAAAAGGGGCTTAattc
cattttcattaaatttgagaTTGTCACAAAGCACTGCTTCTTCGTTATCA
ATCATAATTCATATAGTTAGTGGagtacaatcagggacaaaatacttggc
acaaaaaggaaattcaccggggtgttttgaaaccataatcgatttgtaag
tgctctaaagtaggttcgaagggtagagttttaacgctagacttttgact
taggaccttaggatctgaggatccaaaagtttaaaaatggtccagtaggg
cttgaaatatagcctagaaaccaataaatccctccgaGATCAAAATACTC
GATGAAATCAaattgaaggcctaaaaattgagaTTCTcactcgaacttca
attttcgaaaaattgtaaattagccaaaagtgccaatatattatgacact
GATTGTAGTTATAGAATGGAGTCTCCTTAACTCGGATAAGTTTTATGGTT
CCTTCACTAGTTAACAATGCTTTATAAACCTCACTCAATAACACGAAATT
TCCAGctctcgaacaaatttgcgttcccGTGTGTTTTTGAGTCATGGAGA
CTAAACTGTACTAATATTCCCGTGTGTTTTTGAGTCATGGAGACTAAACT
GTACTAATATTCCCGTGTGTTTTTGAGTCATGGAGACTAAACTGTACTAA
ATTGGATATATCCCCTTTATTTTTCAGGCAACAAGGTTTGTATTAGTTAT
CCTTATTATGCTTACACAACTTCGAAGAAAGAAATCACAGCCCAATGTCG
CTCCAAATGTTTCAAAACTACACATGGTCCGATCATTGCAAACAGAATGA
TTAATTTATTAGGGCGTTATGCAGGTAATGGCTATCGTTACGATGTAACA
TCTTCGAGTACTACGATAAAGCCGATGTGGTTGTTCACACTACTGTTTGT
GATGCTTGGTTTTAGCAGCATGCCTTAGAAAACCATTACAATTTACGAAA
GCATCCAGCTAGGACCTTTTTTCaacatctgtttcccaggcatagccttc
ctggaaaatttgaactATCGGCCAAAAGtgtcaaaaatcttattcctaga
aatgaagatgttttgaaaattcttaatctcaaagtatcttccctagaaaa
ttGGGTCTgtttccatttttcaaaaaggaagAACTCTTTAGCTAAGACAA
TGTAGATAGCGGTGATAAAAGCTTCAGGATGTAGCGGGATCTAAATGAGA
TGAATAAGTTCTGCCTGTCGAACCTTACACGACGAAAAACCTTTACGAAC
CTTTGAGAAATCTTTACGAAGACAACCTTTATGACCTTAGAAGGTCATAA
GGTCATAAATTTTATTATAATATTCATATATTGTACCTATTCTATACTTA
TGCaaatttttatgattctgaaTGAATATGTTTAAATAAATTGAAGTTTT
AAGAAGAGTAGACGCAACGGGCCacgttcattttttttattccgGCATTT
TTCATTTATGCATTCATTCAATGTATATGTACAGTGATTATACAATAAAA
TTATTACACAAtatcattttgatattttgatcaaaaactcgtcaaatttt
attgttccatatTTTAAGACCTCATACCGCGTCATACGAGGTTAATAAAG
GTCCGAATTGCTACGAAAATAATGCTGAGCTTGCGAAAACATTGCAGTTA
TTAAAACAAATCATTGCGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066168TCONS_00066168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066168-proteinTCONS_00066168-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:803307..806976 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0.1	0.12	0.24	3.67	2.71	6.73	9.29	8.09	21.17	23.09	7.33	29.06	14.73	12.55	12.6	7.89	8.02	29.06	45.1	5.65	6.21	4.4	8.07	10.96	23.21	64.3	56.83	230.95	173.78