XLOC_041709 (gene) - C. hemisphaerica

Overview
NameXLOC_041709
Unique NameXLOC_041709
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_458:93522..99590-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041709 ID=XLOC_041709|Name=XLOC_041709|organism=Clytia hemisphaerica|type=gene|length=6069bp|location=Sequence derived from alignment at scaffold_458:93522..99590- (Clytia hemisphaerica)
TACAGGTAGAAGATGAATACCAAAAGGCAAAGGACATTTTCATTGATATG ACTTCGGAATTATATGAAGAGCTCCCTGCATTGTATGACAGGTAGGAAGA CCTCATTGCTTATCATCAATCAATAGAGGTTGAACTATTTGGTTGTATCA GGGTTATGTACACCTATCAACCTGTTACAGCGCGGTCAGCTTTCAAGGGG TCGGGTACTGAGCTTATATGACATTTCTCCGCTTGTGTTTTTCCTGATGA ATAAATATATTTCATTGCCTATTCAGCAAAACTCGCTGCTATTTTAAATA CAAAAGAATTGCGCTAGAAGCACTATACCCTTGACTAAACGAGAGTTCTA TTTCAAAGTGAATTTTTGATCAATAATTGCGTTCTTGTTCCACCTGATAC TCCTATCTCCATCAGACATCTTTGAATTAGTAACCTCATGATTCTGATAG GGTGTTCACGCACTCAAAAGATGCACCGGACCAGAATGTGACGGAACGCG ACGTAGCACTTAGGACATCCTATCGTCTCACTACAAAAATTGGTCCGATA GGTTTTCTATCGTCTCGAAAATCAGACCATGTTCACACTAACCACTTTCT ATCGTCACAAAAAGCTATCCGGTATAGTGTGAACATGGTCTAATTAACAC ATTTTTTCATTTACAGTCGAATTGGGTTCTATGTTTCCTGTTTTCAAAGT ATATTCACGTTGGAGGAAGTTTTTCATCGCGAGGCTGCTGAAGTATGTAT TTGGTTTCCCTATATTGTTATAAAACAACTTAAAAAACAACTTAAAAAAC AACTTAAAAAACTCCTAACAGTTTATTTATATCGGCATTCTCTTGACACG GCATTATTGTTTTCATCGCGAGGCTGCTGACGTATGTATTTGGTTTCCCT ATATTGTTAATTCATTCTTTATCCGGAATACTATCTCAGAAAGAAGTCCT TCCTAATAATGAAAATGTGTTATAAAAAAGAAGGTTAAACCTGAATAATG AAAAAAGTTAAATACAACTTTTTGTGATTCAATATATATATTTTTTCGGA TTTGCCTGCATTTTTACCTTTAGGGTTTGATGGGAGAGTCAAAATTTAAA CTTCAAGGGAATAATAACTAAAATTTGAAGAAAAAAAACAACTTAAAAAA CTCCTAGCAGTTAATTTTTTTCTCAAGGTCTCTTGATTTCGAGATATTGA CATTCTTTTGACATGACATGACATTATTTGTACGGTTAAGTAGAGTAAGT TACAGACCCTTTGATTTTAAGTAATTCCACCATCCAGTCCTATCTAGGTT CGATCTAAATTACTGTTTTATAGCTCAATCACAACTTGAACGACTTGATG GACCAACTTATAGCGGACTTCTCGGCTGGAACGTTTAGCACTCGTAAACC CTTCTCTGCTGGCATGTAAGCGTTCTTTCTTCATTCAAATAAATTCAACT ATTCTTTTCTTTTCGACGATTCAACAGATTCTGCACAAATATACTTTCCG ATACTTTCAAAAGTAACGAATCTTTTTTATATTATGAATTGAGCTGATAT TCTTTTAGAGCAACTCTCTATCTTATAATTTACTTTTAAATTTAAATTTC CATGATCGCATTTAGTGAAAGCAGCTTGAATGTATCAGAAAAGGAAAAAG ACGATACAAAACTCTCCAGCGGGAGTCTTGCTCAATTTTACGACGTTGCA GTTCCTGACGCTGAAGAAGTAGAAGAACATAACTCTTCCACAGAAACGCC CCACCAACAAGATACACCTCCAACCCAAGATGAAACAGACGCCCTTCAAC CGCCCTCACATTACGATGCACCAAACAGCGAAGATATAGATTCGACTCCC CCGCCCGCCGTACCATCACAGCCTACGCGACCTGCACCAACTCCGCCCCT GACGTCTTCACCCGCTCGCCCCAGCCAACCAGAACTATTTACGGTGGGGA AGGAGGAAATAGATGGTGTAGTTGAACACGAACATGGAACAAGCAAAGAA GAACAAGTAAGACATTTCTTGTTTTCCATAATTCATGATATGCACCACTG CAATGACTTCACGAAATTATGCAACTTTTCTGGTTTTTTTTTCACCCAAT ACATCACTTTTTCGAAAAGTGCTTGACCCTTTTTCCGCCAAGAAAAAAAT CAAGATTCCATATTCTTTGTCTTTTTTACGCCATTCTTTTTTTGGGCGAC CCTTAATATACGTATCAAAACCAAAAATAACGCCGATTGTACTGTAACGG GCTGGCGAAAAAAGGGTCGATGAGGTATTTCTTCTTATCTTTCCTTCCTT ACGAACAATATTAGCGAGTTTATGTATTTGCGCTTTTGAAGAAGGTACAG TGACCGAAGTGATTTGGAAAAACCCGCAGTTCTGCCCCGCAAAATCGAGG ATGGTAAAATTGCTGATTTACCGTAATCCTCAGTTGGTCAGGGTCTAGAA AAATTAAAACCGTCTCCGTCGCAGAAAAACACACATACATAAACTCAGTA TTTATCTTGTTTACAGGAACCTGATGAGGTAGATCCCTTAGAAAATTCTT CTTCAACATCACAGGCACAGGAAGAAAATTCTCCAGAAGAAAACCCTTCT GCGTCGAATACAGTGGAAGGTTCACTGCCAGCAGATTCTAATTCAGTTTC AACGAGGGCGGACGTTTTGGCTTATAGAAATGTTCCTTCGCCTGAAAATC CCTGTAATTTAGTTGTACCCAATGCAGTATATAAGGTAAGAATATCTGAA TAAAGAATAAGGCTTGTTCTCGTCGTTGTTCATCAGTTCGAACCTTTTTT ATCTAGAAATTGTCGAATAAGGGCAAGGCTTCAGCATTGAGCTAGAATCT GAGATTGTCTGTCTGTGTGTGTATGTCCCAAAACTTTGGGGCAGCCTGGA GACTTCAAAAATTGTCGGGTTTGGCTGAAATTTGGCACACTGTTTCCTTG GGTGAATATCTGGAGGTGTTTTTTTCATTTTTCAAAAAATTTTGGAGCCT GGGGACGATTAAACGATTGGAGCCCTGATTATCGAACGAGGTAATGTTTG ACGACAATATGGATAAAATGCGAGCAAGAAACGTCTGCTCCGGATTATAG AGTGGACGAGTCATATTCTGCATATTTTGAGCTTCATAATTTTCAAATGT ATTACTTGTGGATATTACTATAACTGCATAATATGAAAATCTAATGAAAG TTACAGTGAAATCTTGGCAAAGGTTTACTCAAAACTGGGTTGTGATTGAA GAGTTACAGTTTAAAAAAATCCAGTTGAAGAGATTTCGTTATAGTGTTTC AATCGCAATCACTCTTGAACTTGATTATTCTTTCTCTGTTATAGGCGATA GCAACGCATAAATACAGTCCTGAAGATGAAGACGAACTCTCCTTCGAAAA AGGGGAGATTATTCATGTCATTCCGTACGATGATCCAGAAGAACAGGTGA GAATTGATCTGTTGTCAGGTTAAGTTATCTTAGCCATTATCTTAGCGACC GTAGTGCAGTGTTAGAGAATCCGGCTACTGTGCGCAAGGTTGTGGGTTCA ACCCCCAGCTGGGTCATACCAAAGATTTCCAAAATGGTACTATTGATCCC TCTCTGCTTGATGCTCAGCAATTAAGAGAAGGATGAAAGGTAAGTGGAGT AGTCCAGGGAGAAGGTCGCCTCCGACTGCGGTCGCACACTTACTAGGTTA TCTGGCAGATCTTTCCTATAACTGTCAAATATCTTTAAAAAGTCCTTCAT TAACTTGGAATAGGGCCATGAATATAGGGCCTACTTTATCAAACCTATTT TCAAGGTAACAAGATAAGGATAAGCCGCTCCAAATTTTGTCGATTTTCGA TTTCTTATGAAGGGGGTCAATAATTGGGCTGTTCCATTTAAAATCCATAC AGGGGTTGGACGAACCTTTTCAATGAAAGAAATAATTCTTTAAATGTGTG GATACCCCCTGGAAAATGGCAAAATTTGCTTTAAAAACATGGAAAATACC TTTCCTTAATCCCCCTGGAAATTCCTCTTCGAATTACCCCTTACACACTG AAAATCTATCAGAAATAATCCAGCCCGCAACGCTAATAATATTATTGGCA CTATTCCACCACCAAATGCCGAACCAACATATTTTTAATGATTGGTTGGA TTCGAATGATTGGGATTCATTTTCCTTGTGGTTTTCAATCCCTATTTTGT TAATGAGCCCAAAATTATCACTTTTGGCTCCTTCACAAAATTATAACGTT TCCATGAGTCCTTATGACGCCCTCATTCCCACTTTTTGTTGTATTACTCC TTGGAATTCGTTTGATATTGCGTTGGCACCAAAAGCCGATTTCGGAGGCT CCCTTAGAATATTTATTTATCAGAAAATGAAAACTGAAAACCTATTAGAA ATGGGCTATATGCAATTTCATCTATGTTTCACCATCTCATTTCACCAAAA GAGCAAGAGGAGAATTTTCAACCTTTTCTCAGGCAAGAAAGAATGAAGCC ATACAGTAAGATTAGTGCCGCAATCGTAACGATGGTTTTTATCTAATGGT TTATTTGTTTTCGAGTGGTACATTAAAAACTTGGCGAAAAATTTACTTTC AATTCAGCGTAAAAGCCATGCAAAACACTTTTTGGAAAAGCTTTCAAACT TTTGTTCCCTTCCCTAGAATGGCTATTAGATTTACTTATGATCGAATCAA TTTTTGATTTTAGGGTGTTATTCTCGTTGTTTAGGATATTTCTCCGATAC ATTGACTTACATGAAAAATGCTTTGTCTACTCGATGAAAACCAAATTGTG CCATTTCAATTTCTTGCTTCATAATCTAAAATGGGATTTTGATTTCATCA TTGCAAAAATTTATTATTGAAGAATACCTCAACATTGTTTTACTTCAGTA ATGAGCGAGAGTAGATCAAAACATAAAATCTCAATCAATTTTCATCAAGG ACCCTCGGGTTATATTTATCCGCGGACCATTGTTTTGTCCTTCCCAAGAC TCATCAGTGCGGCTCGGGTAAGCGAGCATAGACTGCCGTTGTCGCCAATC AAGACCAGAACTCTCGGGTTATGGAACTTAATTTTCTTTCGCATTTTAGG ATGATGGCTGGCTGATGGGTGTGATGGACTCTAATGGTTTTGTTGGTGTT TTCCCAGAGAACTTTTCAAAGCGTCTTTCACCTTCTTGACGGAAATTAAC ACAGAATACAAAATGTTGATGTATTTTTTCGGTGGATTTAACGAAAATAT TTCCTCTTTAAAACGAAAATTATGCAGATCTCGCCTGTTTCAGCTTCAGG ATGCTAAGAAAGTATTGGTGGTATGAACAATTTTAATTGCTTTCCTATGA AAAGCTGACTATCGAATGTTTTCTTTTGTTTAAAGTTTTGTTCCTTGCTC TCTTTGGTGCCAGGTATGTAAGAATTTTTCTTTGCAAGTTTTTAGTTTAC ATAATGCCGCTATTAAAATACACCTACCAACCAAAAAAAAGTAATATGAT TAGACTCGATTCACCAGGTCAAAGCAACGAATATCAAATTTTGACTGGGA AACACTTGAACCGATTTTCCACGAAGTGTTTGTGTTGATAGCTGTCATTA AGATTCGATTGTCTCTTATAACGATTGAAGCTGATCGTTTATGATATTTT CAGGGGACAAGGTATACTATTTTTGGAATTAGCTGACCGTTTAAAACATC AAATTTGGATGATATGACCCACAAAAATCCGAATTTCAGTTTTTCTTTTA TGTAATATTATTCGTATAAAGGGAATATGTATTTTTGTAAAATTTTGATT AATAGAGCATTGTATAGAGAGAGTGACAATTTTGAGAAGATTGAGTGGAT TTAGAGCTTAAGTTTTGCATTTAGTAGTAAGATCTACAGCTTCGATGCTT CTTCACGATCAAGCCTTATCTATATCTTGATAGCTTGACATCAGATTGGA CAGAGAGAAGTCGTGGACATTGTACACGTTTTTTTTTTTATTAGAACACC TAAAATTTGGCTGAGCCTGGATGTGCTTATTTTCTTTAGCAATTTTCAGC CTAAAATGTTCTTAAATGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066703TCONS_00066703Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066703-proteinTCONS_00066703-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_458supercontigscaffold_458:93522..99590 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.88 1.84 1.8 1.11 13.37 10.47 11.19 12.95 5.08 8.57 5.71 3.87 6.08 6.05 4.7 5.58 7.01 5.53 4.05 6.16 4.64 5.58 4.57 5.7 5.73 6.51 7.34 6.27 10.26 11.14