XLOC_041730 (gene) - C. hemisphaerica

Overview
NameXLOC_041730
Unique NameXLOC_041730
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_459:46416..56446-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041730 ID=XLOC_041730|Name=XLOC_041730|organism=Clytia hemisphaerica|type=gene|length=10031bp|location=Sequence derived from alignment at scaffold_459:46416..56446- (Clytia hemisphaerica)
GATATTTTATCAGGTCAGTAACCTTCACTGAACTCTCAAATCAAAATTTG
AGTGGGCATAGCTATTTCACGCTATGTCTATTGCAAGTGAACTTGGTTTG
TATCTTATATTTCAAAGTTAGGTGATCTAACAATTATCAATATTAGTAGA
ACCACTGCTTCATGGGTCCAAAGGTCGAATCATCAAAAATAGCCAATGCT
TTCGACCAAATGGATTCTACAGTAATCTTCACGATTTCTGCAGTTTAAAC
CATAAGATTCCATTTAAATACTCTTGTGTACAAACTTTACAATGTTTTAC
AAATATTCGGCATAGTTAGTGAATGTTTAACTATTGAAGCGCACAATTGT
GTGTTTTTCAATATTTGTTTGTTCCAAAGATGGTTTGTATATAATTTTAT
ATTAAGGTAACGATGGGTCAATCTTGCGGTCAGGCACTTTAATGTCAATA
CAGTGTGCCTCATTTGAGGGACGTCATTCGATCGGAACAAGTTTCGCTTC
TGCTTTTATTTTAAATTGGTTTTTCGACAATCGGGGAAAAATATGACTTC
ATATGACTCTTGTTGATTACATCTAGCGCGAGCCTTTTTAGTCCACATGA
TAGACAGCTCCAGGAAAAAACGAAAAAGACTTTATGACGTAACCTAGTTT
TGATTTGAATCTCTCATCTTCTTTAGAAAGCTGTAAAGTATGGCGTCCAC
AGTATGGCTATTGGTCATCTTGACCATCAATCTATTGTCACCAACGACGC
TGGCCGAATCTAGCACGACCACAAACGGCGAAGAAGCAGCCAAGGAGATC
AGTAATCGTGTCGACGAAATGAAGAAAGCCAATCTCATTTTCGATCCAAA
GCTTGACAACAAATTGGATGAAATGAAAAAATCTTTGAAGGTAAAAATGT
TCTTCGAGAAAAAAATATCGTAATGACATTTTGTGATACTACACGATCCT
ATTGAATTTTAGAATTATAGAATCTTGAAGATTTTGTTGCAATGTATCAT
ATAGAGTCTATTTTGGAAGAAAAGTTTCAAAGTTTTGAGGAGTTGTAAAG
TTTTAAATTCACCAATTTATAATTATCTTTCTAACGAGGAATCATATTAT
TTAGGATATTTCTGTTTTTCCTTCAAGATTAATGTTTTTTTTTGTTGTTT
TTTTTCAGAACAGCACAATTATACTGTAATACATTAATACAGTAAATTGA
TTTTCTATCACCCTCATATCTTAAGAGACCGTCTGGACAAAATGAACTAA
ACCCAGGTTCCACCTAATCACCTCCTTGGTTCCAACCCTAAACTCTGTTT
TTATTGTAGAAAGTGAAGCCAGCAACGGATAAAGGATCTGAAAAACCTAA
AGGACCGGATACCATGGCAACAGCTGAAGCTGTCAACAAAGCTCTCCAAG
GGTTACCAGGAATGGTAACTGCGTTGCAAACAAAAGATTACACTTCTGCT
CTTAAGAGTAAGTACACCTCTGTATCAAAGATCGGTTTGCCCCAATTGGA
TACAGGGAAGTTCAAGCATATTGTTTACAATACAGACCATAATGGCAGCG
AATGTCGAGGTCTTCCGCTCTAAAGTAGCAACGTTAGCAAAGATCGTCCA
TGAATTCTCCATCATCGATTAGACCATAGTATAAGAAAGCCGCGGCTGGA
ATGATAACATCTGAATTTCTCTTGTTCTATCTCTGTCGTATTTGATGACT
ATTTGTTGATCAAAAAGTCAGTAATGTAGCATCTTTAATGGTAAATTTTA
TTGGTTTGTCGTTAATACCTACTTCTTTAGGGCGTTTTAGACATTAATGA
TATGCCCTTGATAATACACTTGCATTATAAAATCATTGTAAAGGAAAGAT
CAACAATAAGAAATTTAAACAAGCACAAAATGGCTGGGCTGAAAGAACTC
AAAAATTAATAAATTGCCTCGAATGCCTTCGCAATATTTCAGTAAAATAT
TTTTAGAAATCAATGAAAAAGTACATCAAGATAATACTGTGAAAATTTCA
AGCCAGCACCTTCAAAATTCATCATTCAAATTGACAGGAAAGTTGTCATC
TTGAATATAGTTCTTATAATTTCAATTTTGGCGAAAAACTATTGTTTCCA
TAAAATACCCCTAAAATATGTCCAAAATTAGTTCAAGTGTTCTATTGGGT
ACAGATTGGAAGATATCTAGCAATAAAAAAACTTGTTTTGAAGGAAAATA
AGAGAAAAATTTCAAAAATTATCTACCAATAATAAACTGAGCATGTTGAT
GTTCTTATAAAGCTCGGAGACAGAGATAGAACAGCAATTAACTGAAAAGA
CAATGCGGTACATATTCCAGCCGCGGCTTTCTTATACTATGATTAGACCA
TGTTCAGACGTTATAGTTTGGTATCACTCTGGTGTGGTATTTGTTACGGA
TAGGAAAGGAAGTGTTCATGCTCATTTTGGAACATTTCGGAGTAAGAAAA
CGGAGCAGTTCCGTTCCGATGAAAATAGTGGAGCGAAATGGTTTTGATCT
GTTTTTCTTTTTAACATCTTCTTTTTTGACGTTTCCAATTTTGACGTTCA
CACAATATTTCGGAACCGTTTCATCTCGGAGCGAAACGGAACGTAGCGCG
TGAACGTGGTCTTATTTAGCCTATATAGAGGAGGTAAATATGCGACTAGT
TCAGTCGAAGGTGATCCAAAGACTCCCTCTTCTTTTGCTGTCAGCCTGGA
AGTAGGGGAGGGCCACTTCCTTCATTGGATTTCTCCACTTATCCTTGCGA
TCCGTCTCTTCTTCTCTTCTTTAATTGATGAACATTAAGCACAGAGAGAC
ATCAAATACCATTTGGGAGTCTTTGGTATGATCCAGCCTTGGATTGAACG
CGCAACTTTTCGCATCGTAGCTGGATGTTAAAAGAAGCTGTTTTAAAAGA
CTAGAATATGCTTTTTTTATCTACAGGTGGAATTCAAGTTGTGACGTCTA
TCGTCAATTTATTTGTCCCTGGTACAACCAAAATCGCCAACCTCGTTTTA
AGTTCATACAGTTCAGTAAATTCTCTTTTCACTGGATCCAAAGTTCGAAA
GCCAGAAGCCCCGATTATTAAGTAAGAATAAAACAATCTATGATAAGTTG
GCCTTAAACTCGCCCTGACAAAGTAAACATTTTCAAATCCGATTTATCTT
AGCTTTGGAAAAACTAAAAAGGTCTAGTTTTGGTTCGTTGGAAAGCTTTG
TTATCGAGATTTATCGTTGATAAAACTTCATGTTAAAGGTGTAAATGAAA
TAAGACATGGGTAAAGCATAGTATGAGAAAGCCGCGGCTTTCTTATACTA
TGGGTAAAGCTATCAAAAGGAAAAACTTTATCAACCAAAACCTGTCAATA
TTCAGTTTAAGCATGCCTTGCCAAAACAACATTAGCTTATTACACGCTTT
TTTTTTATAAGAATACACTTTATAAGAATGTCCATGATGAAAATGGCCGA
AAAACTAAGAATATGCTAAGAATATCACCATCATGGAATTTTGCTACTAA
AGTTAAGAATGCCATTTTAAGAGCATTTTCAATTATAAATTATCAATTAT
CCCCAAGTTAGGCTCACTCCTTTTACAAAAGTGCCATTTTATGCTCGAGA
CGTATGTACTAAATGTTAAATCTAGTATGAATTAAGATCCTAACCTAAGA
ATGTGCTGTAAGAATATTTTAAGATGATTTTCCCAAAAAAGTTAAGAGAA
TATCCATGATGAAATGGATTTACACCATTCTTATAAAAAAAAGCGTGTAT
TTCAATTGTAAAGTACCATTGACTTTTATTAGGCCTTTGTTGCTCCCTTT
TCGTCAACATGAAATAAACTATTACACATGTACCATACACGCTTTGTATA
TTCGTTTCAGGGCTTTAGAAGATTTCAAAATTGAAGGCCTACAAGATGAA
ATAGCTGGTATTCAGTATCTGTGGGATATGATGACCAAATCTATTGCTCA
CTTTGAGGATTATTTGAACAATGACAAAATCATTACTGAGCAGTTAGCAA
CTCAATTCTACTCCAATTCATTCCAAAGGGTGAGTATACAATTTTTTATG
ACATATCCCCTTCTCACAGACCCGCTTTTTCAGCCAATTAATATATTTCC
ATATTTTCTATGGCTATGATCTCAATTCTTTTGTTTTTAAGTAAGAAATT
TCAGTGAGGATGGGAAAATTAGCATAGTATTTTTGTAGTGAGGATTGGTT
TATTTGATTATTTTGGGATTATTTTCAGTGGGGACAAAAGTTGTAGGAAA
AATTTTCCATAGTGACGATATTTTGCTCAATTTTNGATTATTTTGGGATT
ATTTTCAGTGGGGACAAAAGTTGTAGGAAAAATTTTCCACATTGACGATA
TTTTGCTCAATTTTTCCAGTGGGAAGGGGTGCCAGTGGATCTGTGAGAAG
GAGTGTACTAAGGTCAACAAAATTTTCTTCATTTTCTTCACAACTTATTT
TCTTCCCGAGAGCTTTTTTCATCAGAAACAAACTTTTCTTCATAGGTGTT
TTCTATGGCTACCTATGTTAGGAGAAACTGGTGAAATTGAATTTCACTTC
CTCTATTTTGCAGATTGGAATTTTCGGTCGATTAGACAAACAGATCAAAA
AATATTGTATCAAAAAACCTCACCAAGGAGATTCGAATAAAAAGAACATC
GATGTCTGTATGGCTTTACTTACTTCTTACACAAGGTAAAACAACAACAA
AATTTATCAAATAAAAAGAACTACGGAGTACAACCGTTACTATCTTCTTC
TGTTTGAATAGCGTCTTCGTTTTCCTTGACGGTGTGTTACAGTGCTAGCC
CTTTTTTCNCCGTTACTACCTTCTTCTGTTTGAATAGCGTCTTCGTTTTC
CTTGACCGTGTTACAGTGTCGGTTTTTCGGTTTTTGAAAAAAAGAACGAC
GGCATTTTGGTGTCAGAAAAAAATACCATACTGGGAAGAAATAAGGATTC
TACCAATTTCTGATGTCGGTGTTGACGGTATTTCAATGTTGATGACATGA
CCTCCTCCTGCCTCACCTAGAAAACTAATCTTAAAGCTCTTTAAAAATCT
TACCAGAATTACCACGAAAATATTGACCCTATATCTATCGTTTAGTAAGA
GCTATGAATGAAAGGGTCGAAGGGAGGGAGTTGTTGGAAAGAATAATGTT
TAATCATAGAATATGTTAGCTTTTGGCTGACCTTTGCTATAAAAGCAAGC
AAGACATTGGTTTGAAAGTTGTAGAGCTCTAAAGTAGTGGGAAGTTTTGA
CTTTTTCGCATTTTTTCATCCATTCTTTCAACGATTCTTTTAGGTTGAGT
GTTACCAGGAGTATCATGTTAGCGCGTTTAGCAGGCATCACTCTAAAAGC
TGAAGACCATTACAAAGAGCTGATAGACGATCCTAAATATACCAGCTTGA
AGGAAAAGATTGAACGTAAGATGCAAGATATGGGTGGATATAAAGAAAAT
TTCATCTATCTAGCTGATCAACAACGAAGCATGGACAAAGATGTGTTAAG
GTAGAAAACCTCGTACAATGCTCAAACCAATACACCTATTCATCCTTAGT
ATCGCGTTCGGTTTTTAGCCGGAGACTGGTAGTGAATTTACAAGAAAAAT
TTGTGCTCGGCGCACGACATTTTTAGGCTATAAATCAAACTAAGAAAATT
CCTGCCAAAACTCTAAAGTATTGTTACCATCGAATATTTATATTGACGTT
ATATTATCGCTTCAATGCAAGGGTATCTTACATTTTTCACAAGAGCACTC
CTACACTTGTGTTTTCGATACCGTCGTCAAGGAAAGTTTTCCTTGTATTT
TCGTTACTAGTCTTCTCAAAAGCGTTAATGGTTAATACCCGGTTGATATT
ACGTGTTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCTGACGACTGGACGACAGATGAAGAATTAGA
CAATTTATAAATCTAAAATTATTTCGTAGAGGTCGATAGACCTGTGAAAT
ATAATTCTATGAATAAATAAAATGAGCTGTGAGGCGATCACTAAGAAAAT
TTCTATCCATTTCTCATTATTTTTCTGTTTTAGATTCTTAGGCGATCCAT
TAAATCAGTTTCAATCCAAGTTGGTAATTTTTGAACTGTTTTCCAACCCA
GCAAAATACCAAGTGTTGATGACATATCTTTTGAGTTTGGATGAACAGTA
TGAATTCTTGACCGACAAAGATCACGTGATATTGTGTCCGGAAAAGAAAC
TTTCGGGATTATGCAGGACACTTTCTATTGTGAGTATTTTGATAAAATCA
TGAAATTAGATGTCTTAAAACTCGAAAAATACTATGTACTATATAGATCT
AGTGGCCGACCCCCCCCCCTTAAGCGGCTTTCGAAGATGTGAAAGATTTA
GGCGTGATGCATCATTTGGAATATTTTTCGCTATCTTTGTAGGTATAGTA
AAAAAACTTGAGGGGTGCCTCATTTGCTTTAAGATGTTCTCTCTTATTCT
CCAAAATAAATAAAGGTACCAGATATTCCAAAGTCCTAGTTCACATTTTT
TTCTAAGAACAAACTGGACGGCGAAGATTTTAAGAACTAAGAACTTTTAA
AGGCTTTGTGGACTCGACAACACCCTTTTTCTTAGTAAAGTAGTCAAAAA
TATTTACAAAATGGTCAAAATAAGAAAGTTTTAAGAACATTTTGAGGCTT
AAAAAGTTAAGAACATCCGAAGGCTTAAAAAATTTTAGATGTTCTTATAA
AAAACGTGTAGCCCTCCATCCCAGGGACACTTACCCGCTTCATTGTTGGC
TCTTTTTTGTCATCNTAAAAAACGTGTAGCCCTCCATCCCAGAGACACTT
ACCCGCTTCATTATTTGCTCTTTTTTGTCATAGTTCTCCAAAAACATTCA
TTTTCTTTACAGAGCGATGGGCAAGTCAAGAACAACCCAAGAGATTTTCC
AACGCAATCATGGTTTGTACCTATGGGACTTCAACTCTTCATGTATAAGA
AGGGCAAAGAGTTTGGACCTTTCATTGGCATGTTTGCATACTCACCGGAG
AACATGGATGGATTTGATTCCGTCAAAGCTACTAAGTTAGATACTGGAAA
GTATTTGGATGCAGCTGAAAACATTGTCATCTGTAATAGTAAGTTTGTAA
TCATGCAAATTAACAAAAATAAATTTTCTCTGCTGATTCCTTTATCTTTG
TTTAATTTTCGTGGAGATTTTTGTTAAGCTTTGAGTTTTGCGAGTTTTTT
GGCCAAAAAAATCCTGAAATACACGGGGACGAGATTAGGACAAACTCTCT
AGTTTGCGTTACTTTTTAGTGCTACTACAATTGCTTTCATGGGAACAATA
ATGAAAAAAGTAAGCTAAGGGGACTTGGTAAGAGTTGTAAGCTACTAAAA
AAACTTTGTCGTTCGGATCATGCTTTTGATAAGAAATAACAGGCCTGAGA
AAAGCCTGTGCTTGCTCCACATTCATCAAAAACTCGTCACCCATGGATTT
TTTAAACGTTTTTGTGTTTAAATTTTATGATATTTTGTTATTAACCCATG
ACAGATTTTTTAGCTTTTTTTAGCTGAAGCGAAAATCAGGTCAGCAATCT
CACTCACTTGTGAATTTTTGTGTTTGTTTTTCAGCTAACAAGATGTGTGA
TACCATCGATAGTAAGATCTACAAACAATACAATCTCAAGAATTACCATG
GTGTCAATTATCAAAAGATAGCCAGCATTAAAGCTCCGGCAGGTGTGAAA
GTCTATCTTAGTGGTCAAGACAAAAATGTCGTCTGGAAAATTGATGGGCC
ATTATTTGGTCCATTCCAACAGACCAACATTGAGAAATGTTACAGTGCCT
GGACAACACTTACTGTCTATAAGCTTGAAGACGAAGAAGATGGTCGAAAA
TATGTTGAGGTATGTGGTCCATCTGATGGATTCTGTTTGCAATTCGAGCC
TGGTAAAGTAGTTAAAACATCACCAGAAGGCTTCTTTGGAATGTTGAATC
CAGATGATACAGTCAAATGCCGACCAACTCCTGAAGGGGATACCTTGAAT
GTGAATATACCGGTCGGTAGGTTGGTAACGGTCAAGAAAGGTGAATCATC
ATATGGCCCCTACCGTGGTCCAGCTTATTACCCAAATCTCAATGTGGCGG
ATATGCAGATCCAAGTCGAAGATTTGTGGCAAGGTGATAAGCCAAGTAAG
AAGAAAGATGATAAAGATAAGGGCCGCAAAAGAAGCATGGCGGGCCGTCG
ACATCATCATCATCATAAGCATCGTCATGGAAGCAATGAGACGGTCGTTG
CTTTTGAAGATTCTTTAATGACACCCTAGTTAAAAAGTTGTCACTATCTC
AATAGCCCTTATTTCGATTGTGAAAAATTGTTAAAATATTTTTAATAATT
TTAATGTAAAAATCAATCTTATTTATTCTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066729TCONS_00066729Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066729-proteinTCONS_00066729-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_459supercontigscaffold_459:46416..56446 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17	0.27	0.32	0.06	0.24	0.34	0.2	0.17	0.96	0.66	4.94	11.15	33.43	20.25	4.09	5.16	1.13	1.09	1.79	1.34	0.52	0.74	0.48	0.31	0	0	0.36	0.31	0.37	0.22