XLOC_041750 (gene) - C. hemisphaerica

Overview
NameXLOC_041750
Unique NameXLOC_041750
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_46:195439..200161+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041750 ID=XLOC_041750|Name=XLOC_041750|organism=Clytia hemisphaerica|type=gene|length=4723bp|location=Sequence derived from alignment at scaffold_46:195439..200161+ (Clytia hemisphaerica)
GCCCTGTTGATTAGTGCTCATCAATCAAAAAGAAAGATAAAGGGTAAATC GAGTAAATCACTCGCCTAGACGAGAATCAGTGTATTAATTTGTCTTTTCA TATTGCTTTACTTTCAGCTATCGCATTGATAGTGTTTGTAGCCATTCAGC AATGTATTGGTGTAAAGAATCATCAAACTTTCTTCGGGATATACGGAAAG TTTATCCCAGCCAATAACCAGGGTAGTGTTAAAGGTTCACAAAGAAACAT TTTACCACGTGTCAATGGCGAAGAGGGAGGGGACGTTAAACTGACCCTCG GCCCCGCCATAAAGCCCATCAAAACTCGCGATGGACCATTCCAACCAAGT CAACAAGTCAGTGAGATCATTGGCCAAGTGATGCATTTCGACGAAAATAT GTTAAACGGGCGTGGTCCATCTGTTGCTCGACATCACCCAGCGCCCTCCG CCCATCGAGAGGCGGAAGAAGATGAAGAGGAACAAACACCGCCCAATGAT GAATTGGCGTCTGAACACGGACCAACTTCACAGGAAGAAACAATAGAAAA CGACGATTACAACAACGTGGAGAAAGAAGAGTACATCGCGAAAGGGCGTG AAGAAAGCATGCATTTCTCAAAATTGTTAGACCAATTAGAAGATGATCCT GGACTTGGTAATTCACAGACCGGAAACTTAAAACCGACGCATAAGCTTGA ACAAGGTCGTCTGTACAATGGCTTCAAAGCAACGCCTAAATTAAAGCATC CTTTGATTCACCGTAAGAAAGGATGTACGGGGAAGAGATGTGATATAGCA GGGGGATTTTTTGGCGCAACTGATGGACatttcgaaccaccaaatgaaGA TGAAGTACCTTATGATGTAGGAGGTAATAGAACCATTATAATTTCGCATT GATTCAATAATCAATTAAATACGGTACAAACATAGGCCTTGTATGTTCCT CATACATTTCTTACAAAACCTTATTACAACAAATCTGCAGACATGGTGTA AGTACTGTGAAACGATATTGAAATAATTTCACTGTAAAATTCTTTGCGTG TTTAAAACTTAAATACATGTTTTCTTTACGAATCTTTTGATTAAAACCAC ACCATTTCTTTTATTGCAGACACTCCAATCATTGGCGATGCAGAAGGTCC GGTCCAAGATGAAGCTATGATGGCTGATACTTTATTTCACCTTCACAAAG TGTATGACAAAGAGAAACAGGCCTTAGAATTGCTGGGCCACCATAATGGA CATCACTTTCACCACGGATGTAAGTTTGGACATTTAAAGATAACCATCAT CATGGCTCGACCAACAAGGCTTCTCAAAACATGAATGAAGTGTTCTAAAA ATTATTATGTTCTTCTTTGTAAAGCAGCTAAATTGAGTCTGGTAGAATTA AATCATATTGTCAAAGGACAgttcctttttaatttttagtggAAATTAAA AGGTTAAGCGATAACGTTAGTTCTCCTTTAACGAATTCATTATTCCATTC TTCTCATTAGTTGGAGGTCATTACTACCATGAATTTCCACACCACGATGT CCATGACGCGCATGACGAACATCATCACACTCAAATGATCCCCATCGGTA TCGAACTACCTAATCACTTGCATTCTCCACAGAACTTTCGTCACCATGGT GGTGCTACCACTGTGGCTGGAGGTGCCGCTGGTGGAACTGTAGCAGGCGG TGCTGCTGGTGGGACAGTAGGAGGTGGAGCAGCTGGAGGAGTTGCCGGTG GAGGTGCACCCGGAGGAGTTGCTGGTGGAGCCGCTGGAGGAGTTGAAGGT GGCGCTGCTGGCGGCGCTGCTGGAGGAGTTGAAGGTGGCGCTGCCGGAGG AGCAGCTGGAGAAGCTACTAGTGGAGCCGCTGGAGGTGCTGAAGGTGGTG CTGCTGGCGGAGTTGAAGGTGGAGCCGCTGGTGGAGTTGAAGGTGGAGCT GCTGGCGGAGTTGAAGGTGGTGCTGCTGGCGGAGTTGAAGGTGGTGCTGC TGGAGGTATTGAAGGTGGTGCTGCTGGGGGTATTGCTGGAGGGGCTGTTG GGGGAGCTGCCGGTGGAATTGGAGGTACAGAAGGAGGGGCTGCGGTTGGA GGTGGCGCAGGAAGTGAAGCTGCAGCTGCTATTGGAGGAGAAGCTGGAGC GGCTGCAGCTGGAGGAGCAGAGGCCGGCGGAGCAGCAGGCGGATCTGTAG GAGCTGAAGAGGGAGCAAAAGAAGGGGCTTCTGAAGGTGCAGCGACTGGT GCAGCTGAAGGAGCGGCAGCAGGAGCAGCAGGCGGTGCAAGTACTGGGGC TGCAGAGGGGGCTGTGGAAAAAGTGGCAGAGGCTATTGCAAGTGGGGATG GTGATGACCCAGAAAAATTAGTGTCTGCAGCAAAAGAAGGTGCTTCAAAA GGAGCCGCAGAGGGTGTTGCTACCGGGATATCAGAAGGTGCAAAACTCGG CGCAGAAGCAGGAGCTGCTGCTGGTGGTTCACAAGGAGGAGCTGCAGGTG CAGCTGAAGGATCTATCCAAGGAAATGCAGCAGGAGTAACTGGGGCGATG TCGGGAGGAGCAGAAGGAGGTGCAGCAGTCGGAGGAGCAGCTGGAGGTGA AGCAGGTGGCCAGGCTGGTGGAGCGATCGGTGCTTCTGCGGGAGGCGCCG CTGGTGCTGCGGTGGGTGCGGCAGCAGGAGAAGCAGCCGGTGGTGCAGTT GTTTCAGCTGGAAAGTTATCTGGAAAAGTAGAAGGCTCCGCAGCAAAGGG AGCAGCTAAGCTAGCAGGTGCAGCTGGTGCTATGCAAGCATCAGGAGCTG CACAGACTGCTGGTGCTTTGGGTGCAGCTGGAGCCGCTGAAAGTGCAGGG ATAGCAGGTGGTGCAGCTGGTATGGCTGCAGGTGGAGGAGGTGCTGCAGC agctggtggtggtggtggttcGATTGCAGGAGGAGGAGCTATGGCTACTG GCGGTGCTGCTGGAGGTGTTGCTGGAGGTGCAGCTGGTGGCTCGATGAAA ATTGGGGGAGGGATCACAGGAGGTGCAGCAGGAGCATTGAAAGCTTCAGG AACCGCAGGTGGAGGAGGTAGTATGAAGATTGGAGGTGGTATGGCAGGTG CAGCTGGAGGAAGTGCAGGAATATCAGGAGGTGCTGGAGGTTCACTTAAG ATTGGAGGTGGGATGGCAGGTGCAGCTGGAGGAAGTGCAGGAATATCAGG AGGCGCTGGAGGTTCGCTGAAGATTGGAGGTGGGATGAAAGCGTCAGGAG CTATATCAGGTGGTATATCAGGTGGCGGCGGGTTAAGTGTTGGTGGTGGT GGTGCCATGAAAATTGGAGGCGGCGGTGGGTTGAAGGTTGGTGGTGGAGG GGCAATGAAGATGGCCGGAGGAGCGGCTGCTGGGCTGAAAGCGGCAGGTG GCGCAGGGGGTGCTATGGCGGCAGGAGGTGGAAGTTCTTCATCGTGGAGT TCAAGCTACGGTTCAAAGACAGGAGGATATGGACGAACCATTGATGAGGA TGAAGACAAGAAAGAATCGATGAAGAAATTATCGCTGAGTGATGTTTGGT CACGAAAGATCGTTGCATTGAAAGCGAGAGGAAGCGAAGCTAATTTTGTA CCCAAAATTGTCACTAGCGGAGGAATCCCTGGCGAAACAGTAAAGATTCG TAAACCAGCAATGACCAAGAAGTTTGTACATTTAATGGAGGATCTGGCTG GTAAATTAGCTGTCAATAACCTGAACGTAGCAGAagaatttgtgaaaaat ttgaagaagaagaaagaagaggAAGTTTATGAATCGATAGGTGTTACCAG ATCTCTTAAAAGTAaatcgaaaatattttcagcaaaaaacgcagtcaaaa aacatttcattaaaaagttgaCAACgaataacaataacaaacatCATAAG AGAGCCGTTAAAAAGTCCAAAGTCAACATTGGAAGTGCTCTCTAGAAGTG ATTTGCTTCGATTTTTAGGACAGTTTTTagtattgttttcttttcaatta ggTATTTTTTTGTGACAATTTCATTCCCTATTTGGTAAATATTGTATAAT AAAGAATTAAAccaataaatcaaaatttctattTACCGTATCGGCCCTTC AGTCTGGCCGAAATACAATAAAACAGGAGTGAACGTAGAAAAAAATTccg cgtaaactttcttggtaccgttggaagcGGAATTTTATGTAGATCCTCAT ACTCAGGGCCTCATGATGAGGCCCTTGGGGAAAACCTTCGGTAAAATCAA GCCTGAAGTGTACTTCTTTGCCCCGAAATAGATACGTTTTTGAGCAGTGT ACTTGTTATCAGCTACACTAAAAACCTATCAAAgctattcaaagtctttg aaagtcagcgCTATTCCCATGTGCTTTCGCCCTAGGGCTTTCCGCATGCA TTTGACCCATTTCATATCATGGATGACACTGTTTAATTGATTGTGGTTTC CAGAAATGTTTGTTGGGAAATCCCCACCGCTAtatttttgagacaggggt atacatTGAGTGTTTTAAAAGGCACCTACCATTGCAAGGATAGCACTTTT CAAGGCATTTTATAGCGAAAATGGGTCctttatgttttattttgccaatt tttcccCCAAGGGCCTCAacgtgaggctctgagtatgttaaacttcgtaa aattccgcttccaacgataccaagaaagtttacgcggaatttttttcaag gtcaacttttatttctgcCAGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066760TCONS_00066760Clytia hemisphaericatranscript
TCONS_00066761TCONS_00066761Clytia hemisphaericatranscript
TCONS_00066762TCONS_00066762Clytia hemisphaericatranscript
TCONS_00066763TCONS_00066763Clytia hemisphaericatranscript
TCONS_00066764TCONS_00066764Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066763-proteinTCONS_00066763-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_46supercontigscaffold_46:195439..200161 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.09 0.16 0.4 0.17 0.11 4.27 5.4 0.94 1.25 4.56 2.44 7.09 6.92 7.54 27.57 13.2 9.96 0.08 0.22 7.7 8.45 9.27 7.4 16.04 15.87 1.48 0.74 0.22 0.25