XLOC_041752 (gene) - C. hemisphaerica

Overview
NameXLOC_041752
Unique NameXLOC_041752
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_46:257849..261811+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041752 ID=XLOC_041752|Name=XLOC_041752|organism=Clytia hemisphaerica|type=gene|length=3963bp|location=Sequence derived from alignment at scaffold_46:257849..261811+ (Clytia hemisphaerica)
gtgccatccgcgaaaattaatccccgcgaaatcttaaaatttcgcggatg
agctcaaccgcgaaatttaatccccgcgaaaatttatcccattaaagtag
gtgcaccttgtccggaccaaaatttatcaggtgcgTTCTTTCAGTGCGGA
ACTTGGTATTTCCGAATTTTTCCTTGAGTGCAGCCTTGCCATATTTTGCA
AACTGGAAATTCTAACACCGAAAAGAGTGCCAATAAAAACGAATTTCTTA
CCATCCATATTCTTCTTTAGCTCCTCTTCAGCCAAATCCATGAATCCAAC
AAAGAAATCGCCCTGGTCCAACAAAAAGTAGTGtttaatcgaacgcaatc
gataCATCAATTTCTTCTCCGTCAATAATTGATCTAACAACGTGTGACTG
GCGTAATCGTACGCTTTCTCAATGTGCTCTACGTAATCACGTTCGTTCAG
ACAATACACAATCTCTTGCGCATGCGGGCATTCTAGTGTCATCCCACACT
GGCGAATGACGTTCAAGTATTTACCCGCGCGAAGAATCTTCTCGGCAACG
CGTTCAAGGAACATTGGAATGCGCGCGCGTTCGATTGTGTAATGTTGTTC
CCAATATTGATCATTGTAGTCTTCCGTCACGCGTTCTTTGGCGAACGACT
CGTGCTCTGCAACCAGGAATTCATTGTAAGGATCTTTGATGATACCTaaa
gtgagaaaaaaagaattttttaaattagaaATTTACGCTTTATTgcaaag
aagatgaaaaatggcaagaggagaattttgaagaaaaagaaattcgatTT
AACAGCTAGCTCGAAGGCTAAATCTTTCCCTGCCAAGAAGAAGATCTCAC
CAAATACTTTAATCTATAtattttttaacatattttcCGATACAGCTCTA
ATTAtagaataatttgaataatgcAATTTTGAATTATGGAAATTCCACAA
CAGTCGATTTCAAAAGAACCAAAAGAATAAGTCGAGAAGAATTTAAACAT
ACCTTCATAGATCCATTTTTGTAGGATATCAAAATACGGCGTACAAGCGG
CTTGAGTCAGGTACAAACACAGATCTTTGCCTTTCGGGTCACCCGTGTAA
GCTTCTGTCTTCTCGTGTAACAAAGTCAAAATGGCTGCTCCTTTACAATC
CCCCCTCTCAATCATGATAGCAACTGTTGCCAAGATATCGATTGTTTTCA
TAGAGGGTTGAATGTAAAACCAAATCTTCTGTAATGTAAGTAGACCCTTA
CGAAATTGTTGCTCAAGCTGTGCTACGAAAATATAATAGTCCTTTAGTAA
GGATCTCATAGCTGAACATAAGGCGTGGCTGACCAATCCCTTACCAAAAT
GAGATCCAGACTCAATAAAGCGACAAACAAGGGAATAATTGGAACACATC
GGCAACATTCGGTGGACAATTTCACAAAGTGATGCATCGGTACTGTTATC
TATAGTGAAagattttttggatttcttttcgACATCTTTGACTTCATCTT
TAAGAGTTATATATTTCCCTTCGACACCCATGAACAAGAATAGAAGATCC
TCGATCAACAGTACTTCCTGCATTTTTAACGGTAAAGTTCCAATGGAAAC
AGAGTCTAAATCGTAAGCCTGTCGATACACGTCAACAAAATCGTTGGTCA
AGAAAGGTCGATCATCCACCCAACTTGGGAGGACAGGTAGACCAGTACCC
ATTTTCTTGGCGTGTTTTTCACGAAGGACTTTCACAATCTCCGTAGATGA
GGTTGTCGAAGTGTTCGCAGTGATATTGGCCAGTTTCGTTTTCAAATCTT
GAACATCTTTCTGAGTCATCAGTGTTGATTTAGGGATGGCTTTAGTGAGT
GCATCAATTTCCTTCCCTAATTCGGTTGTCGGGGCAACGGCCGCCATATT
TGAAGCGGAACTACCGGacaattcttttgattttcgACGTTCTTTATCAT
TTCGATCGataaatttgaccaaataaCGCTCTTGAACAATCGTGGACAAT
AAATAAGTCAACGAATCTAGTTCCCGTACATTTTTCGATTTCAGTTCTTC
ATATTTTTTAAGAAAGTCCTCAGGCGAGGGACTGTTCTCTGCAATCTTCC
GCTTCGCAGTATGCGTGGAGATTTGAGTGGTAACATAGGGTGTTAAGTCT
TTGGTCAATAATTCAGCATAGACTTCAGGACCATCTCCCTCTGTCACGtt
gaataatttcaataattctGCTGCATGATGATGGATTTTAAATTCACTCA
TTTTTCTTAGATCTAAAGTAAAAACGGTAATATGAGAAATTGAATCTTCA
CCATACGATACTGTGATTATAGAAAACATAGCCGAATACATTGATTTATA
TTCTGACCAAAGAAAGGGCAATGAGACAATACCATTCGTATTGGTACTAA
GTAATTGCACAAGGTCAGAGAAGGTTAGGATTGGTAGTTAGTTTGCtaaa
tcaaaaaaactttaaaaaacttcaAGAGGGGGAATGAAATATGATAAAAT
CCCAACGATCGAcacaaaattatccaaaaaaaactaaactgaTAGAAAAA
TTATCTTACAAATTAGAACTGCTGTTataaattagccaaaaaaatTCCAT
TATAATACATAAAATACTAATATTCCAGCTGATTCCCAATAACAAATAAC
TGGATTAACTCCAATTATTTGCCGTCAAAATCTCAATTTTGCTGTAATGT
GGTATAACTTGACCGAAAATGACCTCCAGAAAAATACCCTTCCTTTAAAC
TTCATACccaaattctttcaaaagctcaaaatcaaaactataaaagaaTC
TTATATTTCTCAACTCTTGGAACTCGATTGATGACCAAACGTCCATCATA
TGAAAGAGAAGCAAAGATCCATGGATCAACACTTGACCATTCCACAGCAT
ACACCGAGTCTTCGTGTTCCTCGAAAGTCGATATCAATCTATCAGGAATT
GGTTCTCTTGGTTTTTCTTCCTCCTCATCTTCGTCGTCAAGGTGACCGAA
AGGCTCCGAAGATAAGGATGCAATATTGGATAAAATGACACGACTGTCAC
TACTCGACGTCAAAATCAATTGATCATGAAAATTATTATATCTGATACTC
CATACCCAATGTGAGTGATCTGAACGCGTCATTAGGCATTCTTTCGTGTT
CCGAATATCCCAAAATTTGACTTTACAATCATCCGAACAACTAGCTAGAT
AGTATTGTTTGTTCGGATTCATATCTAAGTCACGAACTAATTGTGAATGA
GCATTCTctatagaaaatgaagatgacaTGCTCCTCAAATCATATCCTTT
AATGTGACAGTCAATACCGGTGGCAATTTGCGAACCACCATGGTGTGGAT
TGAATCTACCGACACTGTATTGTAATTGTGCTTTTCCTTCTAAGGTTATA
GTATCAACATGATCAGCACCCGTATTTGAAGTTTGCCATAAATCAATATG
TCTTTCAGAGATGGTTAATAGCTTGTCGTTATCACTGGATGGGTTCCACA
TGACTTTCTTGACATCACCATGCCCTGCATCCAACTCACATACATGCTGT
AACGAAACGCATTTACCGTTATTATCACCAGGTGTTAACTCATAAACAGG
AGGTGCTGTCTCATCTAAGGGTGGAATCCTCCACATTGCTGCAAAACGTT
TCGTTTTACCATCTATAATCTTACTATAACACGTGGCTAATATATTCTTA
TCTGAAGGATTCGATGCTATATTCCATATTTCACCAGGCGTGTGCGAAAA
AACATGCTTTGTGACTAGGTTACTTTCGTCttcaaaatcaatcaaatgGA
CTTGGTTATCATTACGTAATGATTGGGTACCAACTAAAAACCGTATTGCT
TCGGTTTCGCCAAATTGAGGGCATAACGAACGAGCTTGAAATTCAAGACC
ATATATCACTGGTGCTGGGTCATTCattctattttctttttgtttctgaa
aagaaagaaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066766TCONS_00066766Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_46supercontigscaffold_46:257849..261811 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.99	20.2	11.98	10.74	26.72	20.03	18.85	20.49	11.35	15.79	10.06	6.66	8.84	8.45	10.76	11.74	13.11	12.3	6.17	8.29	9.71	9.33	19.45	20.74	12.1	13.31	10.88	7.22	14.8	15.85