XLOC_041760 (gene) - C. hemisphaerica

Overview
NameXLOC_041760
Unique NameXLOC_041760
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_46:40416..49008-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041760 ID=XLOC_041760|Name=XLOC_041760|organism=Clytia hemisphaerica|type=gene|length=8593bp|location=Sequence derived from alignment at scaffold_46:40416..49008- (Clytia hemisphaerica)
GTTGGATTGGGACTAGCAAGGAAGCAGGCTCTGCATTGGGGGATGGGTTT GCCCACAATACGATCAGTTTAAGAATTTGTAATGAATACGTATGATTTGC AGTAGTATTATGTGATTATGATCGTTATTGTAGTAAAGAAATATTTTAAG AAACAGACACTAAGAATATCACATATATGTGTGTGACATAAACTCAACAA TGTAGTAAACCATACCATACCATACCCATCCAATATTTTGCTAAGAAAAG CAATTCGTTTAAATCTCTGTTTTACGATACAAAACAAAATTTTAGTCAAG ACCAAATTTTTCTTTTAAATTATCCACACAAACACTCCCAGTCGAGATCC TAATCCAGCCATGGCGGAGGGGCGGCTTGTGAAAGTACACTCTCAGAACA TGAGTCATGTCGAAATGGTTGGTCGATTTTTTTATATCATGGATCCTCAT AAGCATATGTTTGAAACACCAATTGAAGTACCAGATTACTTGATCGAGGT ATGGATTTCTACCCCTAATATGTTAAACTAGAGTCGTTAATAATGTGTGT ATACAATAGGCAATAGGATAGGCGTTATAATGATAATACGATTATTGTTA CGGGATCTAGTTTTTATAGATTAAAATTGTTCCCTCTATTACTTTTTGCT TTATTTCTACCATGTCTGAATTAGTCGTCTAGCTTGCTATTAAAGAAAAT CTACATTTTAATTGGGCGTGATTTCAAAAACGCCCCTAATTTTTAACGTA CGTTCTTTTTAATAAATTAAAGCTGCTGGAAGTTTTAAGTCGTTGATGAG TAGCTCTCGAATCGATCTCTAACATAAGAGACAGCTCTGATTTCTTTTGA TAATCTTTTTAGTTCTGTTGGAAATCTATCGACTCTTCAGTTTCAGAAGC ATATAAAGATTTCCATTTACGTTATTTCTTTTAAAGGCATTACCATTCTT CGTTGCAGCAGTATTTCTTGAGATGTTTATCGCTTTCTTACAAGATGGAT ACAATCACAAGTTATTTTACGTTTTCAACAATATTTCTGCTGCAATGTTT CAAGTGACCATAAATAAATTGGTCGTTCAACCTTTGGGATATGTTTTGTA TTGCTATGTTCACCAACACTACAGGTTAGTTTGAAATAAGTGCGATCGGG TTGGAGCTCTTTTAAGCGAATACATTTTTCTTAAGGGGAATGGCTTCAAA AATTGTAGTGGTTATCGTTGTTTTTTTCAGCTAAAGTAACGATACAGTGA CATATTTCGATTTATCCTATCTATGTCAAGACCAAGCTATTAAAGAAACT TTTATCTTATAGATTGACAACACTTCCTTGGGATTCTGTTTGGACATGGT TGTTTGCGTTCGTCGCTATTGATTTTGCATATTACTGGTTTCATAGAATG GCACATGGTATGTATATAAACTTGAGAAATGCAACTAATAGACACTCGAT AGAAGTAAAAAAGTGTCTGTCCGCTATTATTTGCAGTGTCCGTTGATATT AGTTAGAGCTCACTAAATCTTAAATTATTATTATGATAAGCTACAATCTT GGAAAAAATATTTAAGACAAAGAAGATTTCCCTGAAAAATCTTAATTACC ACAAATTATTTTAGGCGCTCTGATTTACTTCTGGAATCCCCACTAAATAA GCAGTTACTACTACGCCGTGACTGAAAATATATACTTCTATTTGTATTGC AAAACTCAATATTCAGAAGTGAATTTGTTATGGTGTGCGCATCAGATGCA TCACAGCTCTGAAGATTACAATTTAACAACTGCCTTTCGACAAAGTATTG CTCAAAAATACTTCAAAGTAAGTTTAACTAAACCTATGATTTAAACCTTC AGTCCCGAAATATGTATTGAAGACTATTTGATAGTTATGAAAAACCTCGA GACTAAAAGGGTTAATATGTTGTTCAAAAAACACCCCTGTGTCCGCTGAG ACCCCAGCCCAACTGAAAAAATTTGCCAAAATTTCGTCCCCAGTGGACAA AATACCCTACAATTTCAGTCCCACCGGGAAAATGATTTTGATTTCATCCT CTTTGGAAATTCAATGCAAAAATTTGCTGTCCAAAACCACTAGATACTTT AAAGCTCGGGAACGATAAAATTTCTATCCCCATTGGGATTTCAATAAAAA ACGAGTGTTTTAGAACAATTCAATTTAAAATGTTGCGTCGAATTCCTGAA TTTCTTTTTCATTTTCAGTTGGTTTACATCCCGATCGCATTGATTCTTCC TCCTTCTATATATCTGGTGCATGCGCAGTTCAATTTGTTGTACCAAGTTT GGATTCATACTGAGGTAAATAGTAAAGAACTACACCTAAATGTGCAGAGA GCCGGCATCAAAAGTTACAAATAACTCTAAGTTTCTCAAAGGGGTGTAGT TTTCTAAGTCGGTACGAAAGGCGCAGGTCATTTTGGAAGTTTTTTATGAA AAAAAAAACAGTTGGTCTAAAGTTTTATAGCAGAAAAAAAGAAAAAAAGC TGATATCACGGTCATCAAAAACCTTGAACCCCTTCAACTATTTATCTTAT TGATAGAGACTTCTTTGATATAAAGTTATGAGACGATTATTTTCGTAGTT TTTGCCGACGAATATTCTTTCATCACAAATTTTCTACAAATAATGTACCT ATTACTTAATCATATTTAATCGAAACTGAATATGAAGATTTAAATAACTA GCTATGTGTTCTTCTCTAACAGGTTGTTCCAAAACTTGGTCCATTGGAAT ACATTTTTAACACGGCAAGTCACCATCGAGTTCATCATGGTATGTAGACG GGAAACTTAATTTGAATACTACTCTACCAGGAATATTACCCTGGTCCAAT TAATTAAGGGAATTACTACANCTACTCTACCAGGAATATTACCATGGTCC AATTAATTAAGGGAATTACTACACTCTACAATACCCACTGTAATACTTGG CACAAAAGGGGAATTCCCTCAAATTTGAAAACCGCAAGTGATTTTTAAGT GCTTTATAAAGTACGGTTGGAAAGTAGAGTTTTAATTCTGAGTTTTAGCA TGAAGACTTACGACCTTAGGATCTCAAAGCTCAAAAATGTTCCTGAGAAT GTAGCCTGGAATCCACTTAACCCCTCCCAAATCGAAAGATCCAAAGCAAC AAAGTGCCAATAACATTTCGGCGCCGATAGTTAAAAGAAACATTCTTAAC TAAAGATTTAAGTTTTTCCTCATTTACGCTAATTTTAACACCAGAAACCT AACCTTTTTAATTGTAAACTTTTTTTCTTCCAGGAAGGAATATATATTGT ATCGATACAAACTACGGTTAGTCATAGTTGTATGTTAAAATCTGAATCTT AGGCTTGCGATTAAATCGAAGAAAAGATTTGTTTTGAGCTCCAATCATGG ATCATACATCATCCACCTAAATTTTGGTGTGCGTGTATGCTCAGAAGAAT TATAATTCTTGTCTTCATCCGGTAAATACTTTGTCTTTTCATTTATAGGT GGGACTTTGATAATATGGGACAGAATTCTGGGTAAGTAACTTTTTATCTT ATTGACCATTTGAATTATGAAAGATTTAGGGTTATAAATACTTTTTTATA AAAGTTTTACATAGGACCACAGGAACATTGTTCTAGTGAAGGAGAGATTC GAATTCGAGTTTAAAAGACTTCACTGTACTCTATTCGATATAGGGACATT TGCTGAAGAAGAAGAGAAAGTATCATATGGATTAGTTTATCCAGAATATA CAGCGAACCCACTTTTGCTACAGGTAGCCCAACTAGCCATACACCCTTTA CTTCAACATATAATAAACGTGTCTTTTACATTTCCAAGTGAAGAGTAAAA TTTCAAGCCAAGCATCACAAAATCACGAAATTTCCTCTAAAAACTTTATT GAGCTTGATTGACATTGCTTGAGATTCATCCCCTCGTGCTCTCGTCCCCT CGTACTCCCTCTTATTGGCAAGTATTTTTATGACTTTCAGTTAAAAACAT CACCTGCCTTTTACAGGGTGGCCATTTTTATTATCTCTATCGACGATTTT GTAAATTGGAAAAATGGTCTGACAAGGTAAGCTTTGGACAGGACCCTAAC ATTTCTTGATATTTCAACATTGGGTTAGTAAGATAGAGAAGGGTTTCCAT TTTTTTTCAATCGAGAACTTAGTAAGATTAGAAATCTGTGTCTAAAACTT TTTGAATAACTGTTTTTCTGGTAGTTTTGAGACCCATAAGGAAGCTATCT ACAAAATTTCAGTCACATTATATTAATATTAAGGTGTGGGCCTTTTTTGA GATAATTCTACTAGTCTTTTCGATTTCATTCAACTATCAGCTCAATTGCT TGTTCCGTAAACCTTGTTGGATGGCAGAAAGTGAAAAAGTTGGATTAACT CCAGAACAAATGGAAATACCAGAGGTTCGTACTCAATAACAATTTTTTTT TAAACTCAGATAGTTTTTCTAAAAGGCCTCTTTTCCATATTGTACGCTAC ACAAAAAAAGCATTTCAACGTTTACGTAACGTTTGTTTGAATCCATAGCG AAATTTAAATGATATACTAGTAAGGGGGGGTTTCAGGGGTACCCGATTCC GCAATTCCGTCAATTTTTTCTCCAATTTCCGTCAAACCGTCCTAAATTGA ACCAAAATTCCGTCACCGAAAATTCGTTTGAAATTCAATATTTTTGTCGA AAATTCCGCAAATTTTGAATATTATTATTATTATTATTATACAGTATACA AGTTCACAGGCCCGAGGTGGGCCTCTACGAACCGGTTTGATTACAATTCT AATTTGTTAAATATCTAAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNGTTTGGAACGAATTCGTGATCGTGA AATCTGGCTGGACGAGTTCTTTTAACTAGCTTGTCCCGAGTTGTTTTTGG ATCATAAAAATGGATATGCTTATACATTATATACTTATACAATATCTTTT ACCAATTCCGAAATTCCGCAAATTTTTTTGCTAAATTCCGTTTTTCCGCA CTAAAATTGTCTAATTTTCCGTCTTCGTCAGAGAACCCAATTTCCGTAAT TCCGTCCAAATTTTCGCCAAATTCCGCCACTCCGTCCGAAAAAAGGGCCG ATTCCGCTCCTCCGCCAACCATGAAACCCCCCCCTACTAAGGTTGCTACT GAATATTACGTGATTGAACAAAGACATAATCGAAAAAGGGAAGCGGGAAT CCCCAGATACAAGCACTCTCTTAGATGTAACACTTCCTGAACCTTTTTAA TACTTTTTGCTACAGGTGGAGTCACCAGTTCAACTACGTGTCTTGGAACA TTTCAAAATGGAAGATCGCTTAGAGACGTATTACGTGCTTTTCCATTTCC TCATTTCCACTTTCGTTTTCGTCACTTTCTTCGGAAATTATATGGTAAAA TCTTTCTTACTTAGTTTCTTACTTAACTCTAGATAGTGTTCATACCCCAT TTTTAAATCAGTTTTTAAAACATGGATGCCGGCATCTTTAGCTCTATGAA CCTCAATGCTCCAGTGGAGCGTTTTACCATGGGGGATGAAATTTTTTATT TAAATTCCTATGGGGGTAGTTTTGATATTCCCAGCTCAAAGACTCAAAAA ATCTAGTGAGTATGCTTTTGGAGTGCAATTTTTCCAGTGAATTTTGAATA AGAATGAAATCAAAGTTCATTTTCATTGGGCTGATGTTGTAAGATATTTT TTCCAACGGTGACAAATATTTTGGCAAAAATTTCCAGTGGGGCAGGGATT CCACCGGGTCTCTGGTACAGGGATGTTCTTTCTGACCATGTTGTGTATTT GTCTTACATTTCAGTCGTTATCAGTGATAACAGCATATGGTTGTATGTGC TATCTTTTCTTGACGTTGACTTCATGTGGATTTATATTGGAAGGGAGGTA AAAATTACTGTATTTCTTCAAATAAACGCCCTGATCGACTGTGGAGCTGT TTGAATCTTAAAAGATTAAATGATTAAGATTAGATAAGCGCTCTTTAGAG GGTGACGCTGAATAGAAGGAATATATAAAGAGTAACGTTTTAACATTTTC ATCAGTAAGGAAGCTGAATGTCTAGTTAATATTGAGATTGTTGAGCTTTC TGAGCTTTCCTCTTTTTTCATATTATCTTTAAAACTTAAGGCAAAATGAA AAGAGTGTCCAAAGGTTATTCCATACTTTCTTCTCAAAATCCAACAGTGC CAGACAATTTCAAAAAGTATAAAAAGAAGCATAACCCATAGTTTCTTCTC ATTGGTTTAGTGAAACAGGACCCCCAAACAAGGGTGTTACTGCATGCTTA CAGCTAGATACACTGCCAATCAATATAAACAAAAGAGGATCTTAATAAAC TCACGCCAACTAGTACTGTACTCTACCTACCAGGGAGTTCTCTTCCACCT TTTCTTTTACAGGTGGTTTTGGTGTCATGTGGAAGTGATACGATGTCTTT CAGTTTTTGCAATTGATGCATATTTGACATGGAAAAGTATCGATAATCCT GGTAAGCTTTTTCCTTTAGAATATTCAAATAGTAGACAGTGTGGTACCCA GTTGGCGTACACAGTTTATGAATATCAAACTGTGATGACAGATCGGGATT CTAAATATCCGAATTCTGAAAATCATTTCTGAATCTAAATGTATGAAGGA CAGCAAGAGAAATTAAGAAACAAGATTCCCATTCAGATGGCAGAAAATCC TTTGAAAACTTCTTCAAACTTTTCTCTAATTTCAGTGTTCCGGATGAAGT ACGTTTTATATGGCGTTCGAATAATCCATTGTTTATCACTTTTGATTACG TCATTTCAAATACTCACTAAAATAGACGACGTGGCGAGTAAGAAAAAGAA GAAATAAGACCTGACTTAAGATTGGATCTTCATGAAAAAAGTCTTTGTAT TAAATTTTTTTAGGTAAGAAATCATTTCAAAAATTCATCATTATATACAA TTATTTACATAAATTTTACGAAAATATTTCTAAATTATCAAATAATCATA TACAAAATCATAAAGAAAGTTCTGGAATAACCGACGGAATAGAACCATGT GTCAATTTCCTCCACTTGATTCTACGGTTTTGAAACCAAACTTTGACTTG GATTTCATTCAAACCAAGTTGTCGAGCAAGAAAACGTCTCTCTTGACCAA CGATATATTGTTGCTGTTGGAATTCATACTCTAACCGTTCAAGTTGACTT GACGTGAAAATGGTCCGTCGACGTTTGCTGTATCGATTGCTCGTGTCGTC TATGTCGTTGAAGTATCTGGAATACTTCAAATTGAGGTCTGTAAAATAAT GATAGAATAATTTGGTTAAATAAAGCCCTACTACTTAAATGGAATGAATG ACTATGGAGATCAGTGTTCCTAAAGGGAGACTTCAAGGGAATGCTTATTA TACAGTAAAGTATACGGAGAATGTTGGAAAAACTTCAATGTTTGAATATC TGATACTAAATGCATAGGCGTAGCGAGATAACCTGCAAAATTTATGAGGG AGTGCAGACGTTTATGACATATTCATTATCTTTTGATAAAACAAAGACAA TAATAACAGTGTCGTAAAAACCGCTCTCATCCATATATTTTGCAGGGTAT CTCGCTACGCCTACGAAATGTCTTTAAATATCAGAGATTTTGATTTCAAA GAAAACATTTTATGTAAAGTAAAAACACACCTTCGTCTGTATCTTCTCTA TTGAAGCGAGTTGGTGAAGTTGTAAATGATCGATTTTCGAAATCATCTGC AAGACTGTTCCCATGTAAGTTGACACGAAATTGATTGTTGCCATGGTCAC ATTTATCACAACTGCATTTGGTATAAGAGTCGTCAGCCGAGGAATATCGA CGAGTTAAAGTCGGTAAAGAGTCGTCAAGTTTCGCAACTGTTGTACTATC TTCACTCATTTTTTGGGATAAAATTGAGTCGATGGAAAATGCTGGTCTTT TAACGTTTGTGCCGAATTCTTCACTCACTTCCATCATGTAATCCAGCATT TTATGATAGGATTCTTTGACTGTTTACCCTCAACTGTCTAGAGCTAATCT CAGATTAGAATCTCCAAAATTGGTGCAAAGTTGCCCTTTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066777TCONS_00066777Clytia hemisphaericatranscript
TCONS_00066776TCONS_00066776Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066776-proteinTCONS_00066776-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_46supercontigscaffold_46:40416..49008 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AGMOPREDICTED: alkylglycerol monooxygenase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.01 1.41 0.64 0.34 0.19 0.15 0.54 0.36 0.48 0.16 2 0.55 3.78 5.1 6.29 7.09 5.75 1.31 5.43 4.1 0.82 0.92 2.28 1.56 1.3 0.59 0.78 0.23 2.57 3.11