XLOC_042475 (gene) - C. hemisphaerica

Overview
NameXLOC_042475
Unique NameXLOC_042475
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_478:289505..296403-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042475 ID=XLOC_042475|Name=XLOC_042475|organism=Clytia hemisphaerica|type=gene|length=6899bp|location=Sequence derived from alignment at scaffold_478:289505..296403- (Clytia hemisphaerica)
GGAAAACATAAAATGCTTCGAAATTATATCAAACGATGTCTTCTCATCTT TAATATAGCTACTGTTACAATATTTGCAAAGAAGCTTTTACAATTCCAAT CCATCCATCAAAACACTGCTATCGAGGGTCCTGAACCATGGTTCGATGGA CAAGTAACACACAAGGATTTTTGTTTTCACAAATGTGTTAAAAATTACAC TCACTGTTTTTATGTTCAATACAAAGAAATCGATGCTTCAACCTGGCTGT GTAAACTTTTTGCACTCATAACAGATTTGTCCAATCATTTGGTGATTTCA GAAGGGGAAATGTTGGCACGTTCATTTCATCCAAATGATTATAGTGGAAT CGGTAAATAGATTTTTTTATATCTTAAATATTTTCCCTTGGGGAAGGAGG TACCCCTAGGCAAAAATGGGTGCTGACGGTAATGGTAATTTTTTTACCTT TCAAAGTCTTTCTATTACCGTGAAAAGCACAGGTCAAAATCATATATTGA CGCTGTGCTGGACGAATCGAGATTCTATTCATCGCGCAATCAACGAAGAC AAAAGTAACCATGACGACCATCCAAGATCTTGGATGAAGTTCAAAGTTGA TATTTTTATTCCCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTGAT TAGATTGACACATGCGCGATAAAATTTCTATTATTGGTCTTCAGAGGTTA ATATATTCTTTGAAAACTTAACCTCTGATACTCAGGGTATCTTTCTATGG GTTGCAAAAATGAGAAAGATTTTAATTAATCTCTCTAAGGGTCGGTTCTT TCACAAACTCGAGTCAAAGAAGAATAGTGAATAAGTCAAGAAAGTAAGAA AACTTTTCGACAGTATTGGAGAATTCTTTTGAAAATTGAAGAAATTTTTG TGGAAATTTCTTTCTAACCCTTTCCATGCCATTTGACCAAAATGTTGGTC ATTTTGGTGCTTCAAAAAGAAAGTAAAATGAAGCATTGAATTTTAGCTTG AATATGGTAATAATATTTTTCAAAAGATAAAAACGAAGATTTACAACTTG CTGATTTTTAAAACTATTGGTTTGAAGGTTATTTTGGTATAAAACCTTTT AGAAAAACGCTTATCAAAGTTGAATGAAAGTGAAACAGCATAAATTCAAT TTTGACACGGAAGGGCACTTTTTTAGCAATTTTGTCTCTCTAAGAATCAC TTTTTCAGCATAAATTATTTTCTATAAGGGTCGATTTTCGGGGGACCCGT CTACACATACCTGTTATCCGCCAACCCTATCACCCCCTTGGGATTTTTCC AACTCAAAAAATAACAAATTACTTTTTCTTAATGCGGATAAACTTTACTT TCTCTTTTCAGATTGTCAAACGCATCATGATTTTGGACATAAAACTTCAG GTGTATACAATATCACACACAACGGAAAAACAATGACCGTGTATTGTCAC ATGTTTCCAGATGGAGGATGGATAGCTATTCAAAGAAGAGTAAATGTTGA GGATCTTTCATTTAATCAGAATTGGGAAGGTAATGTATTTTGTACAACAC AGATATCTGTATAAAACCGAAGGACTAGATAGGTACTTTACTAAGCGCAA AAAAGGGGATCTAGCGTTGGGGTTGGAATTAATCTTACTTTTTTTGCGTT GGGGTTTGAAATTCTATTGATTATAAAAATGTAATAAGATAAAAAAACTT TTTTCTGGTTTTCTCTAGTAGAGATGGGATTAATTGTATATTTCCAATTG GAGTGAGACCTCAAAATATTTTTCCTAACAGGGGACCTTTTTTAGTAACT ATCCATTAAGTAGCAGGTCCAAAACACTTCAAAAATTGTCTTCTCTCTTT CTTTTTAAACGTCATTTCTCAACTACCTAATAACCCTAGATCTATACACA TAACTGGACGGATTACCCCCCCCCCCTAATGTAGCGCCCAGTGTTAACTT TGCTTTCCATTTCTCGGGTCACCTCTCACAGCTCTTAACCAAACTACCTT TATCGGCAGTCGAACTAAAAACTATTTACTTGTCGTTTTTAGTTTACAAG GATGGTTTTGGAGATCCAGCATCAAACTATTGGATTGGTAATGATAACAT TCACTACCTGACCACCGGCAGAAACATGGATATCATGTTTATTGCAATAG CTTGGGACTGGTCAGAAATAAATGCTCGATATGAGGGTTTTTTCATCGAG GATGAAACCGCCAATTATAAAGTACATTCAGGTAATTTTTTGACTAACCT TACTTATTCTGCGCCATTTTCCGTATCAATCAGCCTCTTCGATACGTCTA TGTCCTTCCCTACTCTCAGCCGTTTAAATTGGAAGATCAAGGTCAGATCA AGTTTTGTCGCCTTGTCGTTTGTTAGGTATCCCTGGTGGTCGTTTCCCGT GAAATCTTGAAGATATATGTTCGCATGCTTAAATAAACAGTAGTGAAGAT AAAAACGAAGATAAACGAGATTTATGACGAGAGTTTTTCGCGAGATGTTT GCAATTTTACGGACTAAACCACAAGAGATTTGATTGAAAGAGTGAAATTA GATTTACGTCATATATTTTGATTAGAATTTGACTGAATAGCGCTTCGCAA AGCATACGTCATAATTATTACTTTTCACTTTTTTTGACATTTGTACGAGT TGCAATCCCACAATTCAACGCGGCTCAATTAAAGATACGTGCAAGTTGTT ATATATCTTTTGTCAATGATGTAGTTAACGTGCAAAAGAGATTAACGCAA AGGTTGGTGGGATTGGAACTCGTACAAACACATCGAGAGTAATGATTATG TCAAAAATAAAATCTATTTTTAGATTTAGCGCGGTGCGCTATTGACCAGG CCGTAAATCAAAAACCACTGTTATAAATTTTATACTTGATCATGCTAGCA TCTGTTTAGAAAACTTTATTTTTAGACTTGGGAGCTAGAGAACCGTCACA AAAATTCTTGGTAAGACTAGTCAAGATTAAATCAGGCACAATAGCCGGAT GCTTCTACACAGACTCATGCTTTTCATATATTTTCTCGTTTCAGGTACAT ATAAAGAGGGTACTTCAGTCGATTACAAAGGTGAGGGAGATTTTTCTAGG GCAAATTTCTACCGCAACAATAGCCTAAAGCTTACTTCTAGTTGAAACTT TTTTTCTCGTATTCTTCCAGTAAAGTAGAACAAGAAGCACTTGGGAATAC AATATTAAAAATTAGGTCGCATTAAAATTGTCGAAGTTTACTATTGTTAA CTAATATTTGGAGGGAGTGGAAGTGCCAAAAGGAGGCCATCATAAAGACA CTATGAAAGAACGAAGAAAAAACGAGAAACGAATAAAAACGACAAAAAAC GACAAATTACGACAAAAAAACGAAAAAACGACAATAAAGAACGAGATATT TTGCCATCCACAACCCCGACGGAAAGTGACTGTACCACCATTCCCCTTAG TTCTATACGCTATTTAACCACTTACGGTTTAAAAGAACGCATGTGCAATT TGTGGGCTCCAATTGGCTCATCCACTGTATGTTTGATCTTTTTTTAAAGT GGAAAAACTATATCTGCTAAGTATCAGTAGAGATCCGGGGGTAGGCATAC TAGTATAGCTTGTTGTGTGAAAAATTTGCTTTGACCACCCCTGATGTTAT ACACGTTTTTTTTATTAGAGCACCTTAGTTTTGGCTGAGCCTGAATGTGC TTATTTTCTCATCGAATTTCAGCCTCAGATGTTCTTATTGACGCTTTTAA TTCGAAAACAAATTAACTTAAGAAAAAAATTAAATCTATAGCACTATTTA TCTCTGCAGGTCAAAAGAAAAAGAAATTCCACCAATTATTTAATTATTCA AAATTCGAAACATTGCAATAACTGCAACTTCTTTTCTTTGACTTTTAAAG AAACTTTTCTCTCTTTTCCAAGGCTGGGCATGCTCTTAAGATGTTTTCAG CCTAAATCTTCTTATAAACTGGGTTCTTATAAAAACGTGTACCATATTCG TACTTATTAGGTCAAAGGCCATCGTTTGTCATGGTTAGATTATCTCAAAA GCTTTTACACTTAGCTTTTAGGTAAAAAAAATAGACTCGTTTGAGGGTTC GAGCCTTAGCAACCTTGTTGTTGACAAAAACAATTTGTTCTCCAAAATAT ATGTTGTATCTACAAGAAAAAAAGCTTCTGATGCCAATCCCAGTTGGCAC ACAACGTTGCTTCAACGTTTATATAATCTTCTCAACGTCCATATAACGTT AGATAAACGTTATGGTGCTAGCTGGGATACTTCATGGTAAGCTCTAACCT AGTATCAAGAGGTACAGAGAATTCTCGCTTATTTGAACTTTTATCATTCG AATCACTCTATAATTCGAACTTATTCCCTATCCCCGTCAAAGAAAAATCT ACTTAAAATCTACTTTCTACAATTCGTATCTCTCTTTAATTTGAATAAAA TAAATTTCCCCGTTTCAGTTCGAATTAGAGACAGTCAACTGTATTTTGAC TTCTTTTTGTTTTAGCCGATTGGTTAGTCCATGATGGTATGGAATTCTCG ACTCCTGATCGCGATAACGATTTATATTCCGGAAAATGTGCTCAATTAAA AGAAGGTGGTTGGTGGTTTAAGAAATGTGCACAGATCTCTTTTAATAATG ATCACACAGACAACAACAAAGCGCAATGGAATAGTTGGAGTAAAAGCTCT ACTATTACTAAAACATTGATGTTGATTAGAGAAAATCGAAATTGAAAGAG TGTTCGTGGTTCATGTTTTATATTGTTGTTTGAAAATCCGTTGCACACAA ACTATAATGAAAACGTTGATGCTAAAGTCCTACTAAAACATTGATGTTGA TTAGAGAGAATCGAAATTGAAAGAGTGTTCGTGATTCATGTTTTATATTG TTGTTTGAAAATCCGTTGCGCACAAACTATAATGAAAATGTTGATGCTAA AGTCCTACTAAAACATTGATGTTGACTAGAGAGAATCGAAATTGAAAGAG TGTTCGTGATTCGTGTTTCATTTTGTTGTTTGAAAATCCGTTGCACACAA ACTATAATGAAAATGTTGATGCTAAAGTCCTACTAAAACATTGATGTTGA CTAGAGAGAATCGAAATTGAAAGAGTGTTCGTGCTTCATGTTTTATTTTG TTGTTTGAAAATCAGTTTTGAATCCTGACACCGTTGCGTACTAACCGGAA TAGGACACTTGGGTTATAAACCCTACTAAAATATTGAATTTTATCAGAGA GAATCGATATCGATTTAAACAGTTTTTTTTCTTTGCACTTTTTTTATCTT GACTTTATATTTTTTATGTAACATTTTACTAAAAGGATCAATATTTTGTT GATATCAATTTTCTTCACATAGGAATGTACAGAACACCACTCGTGGTGCT AATATTTGTAAAGATACTTGGTTTGTTTTGGCAACATATCGTTGTAAATG TCGTAAAACAACTATAGTTTTACATAATGTCATTTGACTTTGTTGTTTTT TGGCTTTCTACGCGTAGTAATTTCCTGGGAATTAATTATAATCATATTTA ATATCTATATATTAATAGCGGTATTCTGTATGTCGTTTTGTTTGTCTGTC TGTTATACTTTCGTTTTCGCACGCAATGTTTTTGTTCTCAGTTTTTGGAC TGCTGGCCAAAGAGCATTTTTTGACGTGAGGGTTTTCAACCCGTTCGCTC GAAGGTACAGCAAAACAAAAATTGAGANATGTTTTATATTGTTGTTTGAA AATCCGTTGCACACAAACTATAATGAAAACGTTGATGCTAAAGTCCTACT AAAACATTGATGTTGATTAGAGAGAATCGAAATTGAAAGAGTGTTCGCGC TTCGTGTTTTATTTTGTTGTTTGAAAATCCGTTGCACACAAACTATAATG AAAACGTTGAGGCTAAAGTCCTACTAAAACATTGATGTTGATTAGAGAGA ATCGAAATTGAAAGAGTGTTCGTGATTCATGTTTTATATTGTTGTTTGAA AATCCGTTGCGCACAAACTATAATGAAAATGTTGATGCTAAAGTCCTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068039TCONS_00068039Clytia hemisphaericatranscript
TCONS_00068038TCONS_00068038Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068038-proteinTCONS_00068038-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:289505..296403 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28 0.44 0.19 0.26 0.21 0.17 0.73 0.5 1.36 0.94 1.7 0.95 19.47 17.73 8.22 5.72 4.25 5.27 26.35 29.55 14.23 14.21 4.84 7.85 4.69 7.27 22.18 23.36 0.23 0.18