XLOC_042674 (gene) - C. hemisphaerica

Overview
NameXLOC_042674
Unique NameXLOC_042674
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_483:320492..329094-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042674 ID=XLOC_042674|Name=XLOC_042674|organism=Clytia hemisphaerica|type=gene|length=8603bp|location=Sequence derived from alignment at scaffold_483:320492..329094- (Clytia hemisphaerica)
CATAGATTGAAACTAAAAGAACAAAAAAATGAACTTTTCAATCTTATCTT GCTGTCTGATCTTTTTATTGTCAACATTCACTCATGGACAACAGAATGGG TCAACAACAATATGTAGAATGGTAAATGTTTCCTTACATTTTGTTGGACT TAATATTAAGAGAAATTTTGAATTTCCATTATCAATGTAAAGGCATATAA TCATCAATATCTATCATTACTATATAAGTGGGGGGCGTACGGAATTTCGG AAATCGGGCAAAATTCCTTCGGTATTTTGGAATTCTGAAATTGTTTCGGT CTCGGAAATCCATGAAATTTTGCTTCAAAGTTTCGGTAATATAAAGTTTT TATCCCCCTTTTTTGAATTCGTACATGAAAAATCAAATTTGATGAAAATA TTTTTTACAGAATTTCAGAAATTTTGGCAAAATTATTTGATATTTCGGAA ATCGCAAACCCCGTACACCTCCCACTACTAAGTCATGGAAAAATGTTAAT CTAATCTATTTTGTTGCTTTTCATAAAACTTTAGGACCAGATGCAATATG TCTACACACCATGTGATAAGAATGATAACGTATGGAGAGTTCAAATCCCT TCCACTGAATGTCTAATAGATCAACCAGCAAAACCTGTTAAAGGTGTCAA ATGCTGTAAGTCTATGTTACTGGCAATAGTGTGTTTCTAAATTTTTAAGC AATTGAAATATATATTAAGTCCATGTTATTACTGTAGAGTTTTAGATTCT AATTTGAAAAGACTGAAGAAAGTAGGATTTTTCATGACAATGAAAATGAA AATTTCAGAAGACTTAAAAATCTTTATAAATTTTTCTTCTGATTTTTGAC AATTTTTGTCTACACAGGTCGGCAGATAAAGCTTAGGGAAAAAGAAAATG AGATAACTGTTTTTTAGTATTATTAATAAATCTTTTCTCGTCACCACTTG CCTATTCATTGTATTAGATAATTCAACCATTTTTTTTTATCATTGGAATT ACTTATTCTTTATTGAATATTTAGCAACAACTTGTCAAGCTGGTGAGTTC TTGGACATCAATACTCAAAAGTGTGAACAATGCCAAGATGGATATTTCTC TGTTGGTGATGGTAAACGATTCTCAAGTTGGGATGAACTTCCGCAAGGGT TCAAATCTCGAGGTTTCTCAGATATCAATTCATATGAAAAAACTCATAAA TCTGGCAAAGAGGACCCATGTTACTAGTAAGTCACGTAAATCCGTAAATC TTTTAACTTGTAAGCGTCCATACGTTTTATGTATCGTTATGTTTTGCTAC TGTGAGACATTTTCTAGAATTCAGGCTTTGATAAAACTCTCCCTTCACTT TCCTTGCTGTTCACTTTCTAGTTCTGGATGGAATTTAAAAGGAGACTACT TGATGTCAAATGGATCATCTTGTCGATCAGTCTTAAAATTCGAAACTGAG GTAGGGAGGATTTGTTATGAATTGATTCAGCCCTATTTCCAGTGATTTTG TATTAAAGCAGATTAAAGCCAAGTAAATGGAACTGGAACTGGAATTTGAC CCAAAAACAATTTGACCGTTTGGATGTTGTGTATCGAAAACTCCTCCGTC GAATGATTCGTGGTGGATTCAGATTCATTTGTGAATCCGGATGCTAATGA CTATCGATATGCAATTAACAACAATCAACTTCATAATATATGTGGAACAT CTGATGTTAGCTTCTTTATAAAATCTCANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNGGTCGACAAATTGCCTTTGAAAGAAAAAATTT CCAGAAAAAAATGATGAAATTTTTGGCCTTTTTCAAAAAAGTTAGCGGCT TTGAAAGGTTAAGCAAGAAAATAAAGTAATTTTGAAGTTTTCTTTTCTTT TTTGATAGCTCGACATAGAGTCGTAACTCTCTGAAGTGAATAGGCCTCAT GGGCGAGAGTCATGACTCTATGTCCAACCTTACCCAGTATGGGTGGTTGT AAATAAATTATTATTAAATGTTTTGTCAGTTTTCGCCACATTCAAAATAT CTTTTTTATCTTTTTTGATATTGTTACTTATTTTAAACAATTTGTTTCAG ATTCAGAATGTTGTTTGAGATTATTTTCCTTACAATGATTTTCTTTTTAC CATTTTAGTTGTTAAAAAAAGGGAACATTTCATTTACCGTGAAGAGTTCA AGTGATAACACTTTATTTCATGTCTGGGTAAGTAGGGATAATATTGATTC TTCTTCTTAATGTTGACACTATTTATTGTGAAAAATATAATACCTTCAAG CTGAGCCCTTCAAAATTGATGTCTTTGAAATTTAAAAGTTAGCTTCTGGT CTTGTATTCTTGCTTTTACATTTAGATTTGTTTGTGATTGATGCTGCAGA GTGCTCAATGAAATCAGAGCCAATTTAAATTTTAAAAGTTATCTTTCATC ATAAACAAAGTAAATAGTACACTACTCCGAGTTTCTCGGAGTAGTGTACT ATTTGCTTTGTTTATGATGGAAGATAACTTTTAAAATTGCTTTTACATTT ACTTGTTTATTTATTCAGTCAGAGGCTGGTGGTTGTGCAAACCCGTACAG CAATGAAGAAATAACACCAGAAGATTCATCAGAAAGCTACTATACACCCA CAGAGAAATGGACAAGGCATACTGTAAGTTTTTTTTATGGTAACTACAGA TTTTGAGTTTCTGTAAGTGATTTGGAGCGCATTCAATACCTGTAAAAACT GGTCAAAAAGTTCCACTTCCAAATTCAAGAAAAGTCATGTCTAATGTGCA GCCAGGACCTTTCTATAATTAATGAGGATTATACTTTTTACTTACAATAT ATGAGATTGATTGTTGACCTTTGTTTACTCTTCACATTTGCAGCTCACGT TGAAGAAGGGACAAAACACCCTATACTTTGTGGCATCGCATTTCAAGTCT TACATTGAAACTAAAAGTGGGGAAGATTACGATAGTCAGTCAGATAATGC AGTTTTGATGAAAGATATTGTGGTCAGAGGTAATGAAAGAGATTTTATTG TGACTTCACTGTTCTTATTTATTTTGGCTCTTTGAACCTCATTGTTGTTT TAATGTTCTTATTTTTAGGACAAAATTGAGTTGTTTTTGACTTAATTTAG TTAAAAATTGGGTTTTCCGGTGCTCATTTTTTTAGGTTTTGAATTGATTT TGTTTTGGCCTCTTTGAGTCTCATTGTTTTCATTTAACTGTTCTTTTGAA AAAATTGCATCAGATCTCATTATCTGATTCTTTTGATAGAGGTTTTACTC TAAGTGAAAAACAATTTTTCACATAAATTTAGGGTATGCATATTCTCAGC AATGTGATAAATGTGATGCAGGCACGAGGAGCACAAAAGGGGCATCTGTG TAAGTTTTATTTAAATCTTTCCAAAGGAAAATATTTTCAACTTAGTCATA ATCACAATTAAACTATTGTTTAAAAGTGACTGTAGTGCAAAGTTAGAGCA TTTGACTAAAGTAGGCAAGGTCAATTCCTGGCCAGGTTTGTACCAAAGAT TCCAAAATGGTACTTATGCCTCTCTCTTTCTTACTTAATTAAAATGGCTT TGTGCTTAAAAAACTATTAGAAATGCCAATCCATGGAGCTCATAATGTTT GGTTGATTCTGAGATTGACCTTCTTTCAGTTTACTTTCTCCATTTTCCTT TGCAATTATTGTTTTGTTTTCTTTAGCTGTGAGACATGCCCAGCAAACAC ATTCTCAACTGCAGGATCATCAGTATGTCAATTATGTCCTAAAAGTCAAT ATTCTCGTAAGTATTTGTTTTGATACAAACAAACTCAATATTGTTCTGAA ATTATTATGTGATTGATTTTTTAGTCTTTTCAACTCGTCTTAATTAGCAT GATCTTATTATATAGTAGAGAGTAGATGTACCACGAATCTATGCAATAGT AAAGATACACAGCAGAAGATGAGGGCTTTTAAATTTCTTTTAAATTTCTT TTAATCAGTGTTAAAAGTTCTTCCGTCTTAGACGGATTTCCGCCTCATTG AAGTATATTAGGATGTCCAAGTTCACCAAAATTTCGAGAATATACTTTTC CGTGTAAAATCCATTTTCCATCCAAGACGAAAAACCCTGTTTTGATCACT GTTTAATATAATTGATTTCTTCAGCACCTGGTTCTGATAAATGTATTGAG CGTAAACCATGTACTAAGGGTGACTACCATCAATTCTGGGATAATTGTAA AAGTGATAAGGTAAGCAATGAATCGTTTGTCTTTGGAGGGGGTTAATCCA TCTAAAGAATCCTACATTTACTAAAAATAGATAAAAAGAATGACAAATTT CACAAAGAAAAACTAATTTTGCCGTCTACAGCCCCAACCCGGTTAGTTGA GACAAGCTGGAGTTTTTACAAGTTCTTTGATAACTCTGTTGGTCATTAAA TGTTGAGACAAACGATTTTATTACTTTTTCTAAAGAACGCGTCATCCCTA TTGTTTAAAAATAACCAATCAGTTAAGGGCTCTGACCATAGTGAATTTTT CATAATTGCCGTGTTTAAAATGTGTTTTCTGACTGATGTAACCAACAAAA CTATGGCATGCTATACATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATTTT CTGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAAA AATTTTGATGAAGAAGAAAATGAAGACTTTTGCGAGGAAGAGTATTTCTG CTTTGAAGAGCTTAGTTTCTGCGAAGAAAAAACATTTTGAAAAAATTTTC GCAGTAAATGGTGTATCTTTTACCGAACAATAAAAACTTTTGCAGAAAAT TTTTGTAAATGCTTCTTTGTCTCGAAATCTTCAAAATAGTGGTTTTTCAT CAATTTTTCATCTGGATTTCGCTTGAAAAAAAAGTTATAACTTTTGACAC ATCTTTTTAGAAAAATTTTCCGCAAAATTTAAAATAGTTCAATTCTTTGC GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAG ACAATTCTTTGTTAAAAGTGTTAAAGAATCTAAAACATAACTTTTATGTT CAGATACTAAAATCAATTTTCTGACTATGGTCAGAGCCCTTAAGCATCTT GTAAAAACTCCAGCTCATCTCGGTTAGTTTGTCCACCCCCACGAATTCAT TCCTCTTTGATTATCACAAAGATTAACTACATATGATTGAAAAAAGAGAA CGACATTACGCATGTGTGCTATAATACAGGATTCTTTCAAGGAACAGACT GTTGGGCAAAAACTGTGCATTATACCTACCCTTAGGCTAACGACCACGTC AGTGTTGTTACGACAGCATGACTGACTTTAAACTATTCCTCCTCATGAAG ATTTTTGTTAAAATATGACTTGATTGTGTACTTGTATCGATTAGGTATTG CGGTTGTCTATTTGTGTTTCTTTTTGGGAAGACTGTTTTTTTTCTCAAAT ATTTTAAGCACACCAGGAATTACTGTTAGTTTTTACATAATTCTCTTTTT TTCATCAGACAAGGAAAAAGTATGAATGGAATGACCCCAAAACATGTGAT GAAACATTAAAAGGAGCTGTAAAATTGCCCGCAGATGGACCTCTCATCCG ATGTCCTGGTTGTAATCCTGGTTTCGAAAACAATGGCACTGATTGTTTGT TGTGCAAAAAAAATTATTACAATGAAGATGGGCGTGGAGGTTTGTTTATA GCATGATTTTCTTTGATTTTCTTTAACTTTCATAACTAAAAAGAATGTAG GATTTTAGCGAAATCAACAGCTTAACCTTTTCCCTTTTCATAAAAATTGC CAAAAATTTCAAGTAAACAAGCCAGGGGCTTAACCATATGAACCTATATG AACCTCAGTATAAAACTTTTTAATTATCAATAAAATGTAATATGCTTGAA TTTTTATTGGACTTAATTTTTTTTTGTTTCAGCTTGTAAGAAGTGTCCAC CACAAACACGAGGTGCACCGAAATTCCATTTCAAATACTGGAAGAAATTA CCTGGCAAAATGATGCACCTCTATTGCCTTGCACGACCTGGTATGGTCTT TTTAGATGTATTCATGATATGCACCATTGCAATGTCTTCTGAGATTACAT CACGGACCCAATAGCTGATTGGTTGTAAGTGCCGTAAAATCAGTCAGTAC GTCACTTACAGCCAATCAGCTGTTGGGTCCATGGAAGACATTGGAATGTT GCATATCATGAATACCAATTTTATTATTCTACACATCTGCCTGCTTTACT AAGTTTCTTTTCAGAGGATTATTGTTATTCGAGACTTGCTAAGTCATATA TAGGTCATTTCGAAAATTTCTCAATTAATAGCTTTATATTAATGTTTTGA ATCACACTGAATTGCCTTTTCTTCCATTTCATCGACCTTTCTCAACTTCA ATTGAGCGTAGAGCAAGAAACTTAGAAAGTCAGTGTCTTTGTGTCCCAAA TAATTTAGGGCATCCAAAAATTGACAAAAAAATGGCAATCCACTTCTGGA TATGCCTTTTTACTTCTTAGAAAAATGTTGGTCTTCTGACGAGTTTCTCA CTATTGCTACAAATTGGGTCTCTTAATAGTTGGAAAAATACTAAAGTTGA TATACACGTATGGCATTTCTTATATAAATCTTTATAGAAACTGGGTGTAA AACATCACAAGGCTGGACACTTCATGATGATCACATTTCTAGTGGGTTAG GCCATGCTGATGATGCTGAATTACTAATGTACATCTTGGTCCCTGGTTTC ACTAGCCAAAAATCAACCTTCAAAATGACCTACCAAGTCGTTTGTCCATC AGGAAATTGCAGACTGCGTATTCAAACGGTTCGTTTTGATGAGTAAACTT TTAGTTACTGTTTTACTGATACAACACTGTATTTCACCTTTTTGAACTTT GTATTAGACGTTATTCATACATTCGAAAGTTTATGGATTCTAGCTACAAG TTATTTTATAAGAACATCCAAAATTTCTGAAGCCTTCGGATGTTCTTAAC TTTTTGACCCTTTTCCTTAGAAATAGGGTGTTTTTGAGTCCACAAAGCCT TCAAATTTTTTAACTTGCTCTTAACATTTTGACAAGGGAAGCTTTATGTC CTTATATTGTTTGTTCTTATAAAAAAAAACCGTGTACCAGAACTCCTCTT ATTTTATACTAGTCCACTTAATAAGATGTGTCGAATTTTGTTGTTTTCAA TACTATAAAACCGTTCTCAAAATTGTTTTTTGAAATGTTTCTCTTAAGGT GGAAGCAGCCAACTTAATCGAAGACATACGCAAAGTTGATGGCAATGCTG AACGATCCACGATTACGTAAGCTCTTGGGTGTTTTTCCACCTTATTTATT TTGATAAGCGCCCATAGGCCGTTTTAGACCATGTCGAACTTTCAGAGGAA AAGATTTGTAATTATAATTTTATTGTCTTTTAACGAGCGTTGCACTCTTT CGCATGTTTCTGACGTACTTGCTCTATTAGCGAGTTTATGTATTCGAGAT AAATCGAAGGAGACGGTATAAAGCAAAGTTGACATGCTATGTCTCCGAAA TCACCGTCCACTTTGCTCGAAAACGGTAAAAACACCAAAATACCGTCGTC TGTTTAGGTGAGCAAAGGCGATTTAGAGCCGTACATTGGACTATACAAAG ACTATCGACTTTGTTTTGTACCGATTTCACTTACCGTCGCCCTCGATATC CTCCGATAAATAAACTCGGTATTGTCTTAAATCTGACAGTGAGCGCTAAG CAGATATTATATTAGATTTTTGAGTTTCAGTCCATTTCTACGCTACATTT CATTGGAATCAAATTTGTCTAGATTTGTAAAATTCTTTTCGAAGCAGTAC TGTACAGTACATTACATTAAGACAAATCTTGAGAAAGAAAGAACAACACA ATAGTTCCCTAGTGTTTCATGCAGACATAATTTGTGGTATTTGTAATAAA ATCATGAAATTTGATTTTTATGTAATTTTGACTTTCTGATTGTTTTGCTT CAGACACACACGATTATCGTCAGCTAAGACACGTTACAGAATCACCTTTG AGAAGAAGTACAATCCAAACATGCAAACTTACAAATATGCTGACTCAACG TAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068382TCONS_00068382Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068382-proteinTCONS_00068382-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:320492..329094 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.77 35.35 35.85 32.83 82.2 65.04 69.74 77.85 41.78 47.44 50.48 49.78 37.84 39.93 23.27 24.27 36.35 35.21 28.86 39.76 28.6 29.15 18.77 26.08 44.26 43.65 39.21 25.52 23.96 19.25