XLOC_042872 (gene) - C. hemisphaerica

Overview
NameXLOC_042872
Unique NameXLOC_042872
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_489:35238..41041-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042872 ID=XLOC_042872|Name=XLOC_042872|organism=Clytia hemisphaerica|type=gene|length=5804bp|location=Sequence derived from alignment at scaffold_489:35238..41041- (Clytia hemisphaerica)
TTTCATTTCAGCTTTTTACAGTCGAGGTAAAACTCATATAATCAGACTGG CAAGTATCATAGAAGTCATGAATACCGAAATGGCAAACCATGACCTCAAT ATGAGGAATGCAAATGAAGAAGAAAATCAAGATCAAGAAATGAGAGATGT TGAGGACATCCAAGAGCAAGTGGATTTGCAAGAAGAAGACCTCGAAAGAC AGCCGGTAAACTTTTGCTTTTAGATATCCATTTGTATTGGGCTATTGCTT ACTCTTATGTGCCAAATAAACGCCCCCCCCCCCCGGACCCTTATAAGGAC CCCCCACCGTTTACTAATTCTTAAGAATATTTTCAGCTGTCAAAGAGAAG GCCCCTTATTTTGCTCTTAATAGCCTGATTTTAGCCTATCTTTACCTTAT TTTTGGGGTTTCAGAAGTACAATTTCCAACACCACCGGCAATTAGGTTTC CCCCGTTTATTAAAATTTCGATTTTTCCACCCCCCCCGCATTTATTTGTC ACCTAAGAGTACATGGTTATCACCACCTTTCCTTGTTATTGGTATTAAAA ATATATTTTCTAAGATTTCCAGAAACCTAAACATGTTTCGGTATCTTTGA AATCAGAAAACTCATGGATACTCCTCCCCAGGAGGAGGCATGAAATGATG TTTTGAGTTATAAATATAAGCAGATATAAGCAAATGGAAATGTCCAGTGT AAATTAACTATGAATTACAATAATAATGAATTTCAAAACGTATTACATGA ATTATAATTTTAGGTGCATTATTCTTACATCATCAGCAAGCAAAGCATGG AACTTGCTATAGAGCTAGTGGTTGCCTCTTTGAAACAAGTTGGTAAGTCA ATACTCATAATACTCAATACAAAGAGGGTAAAAAACATCATCTTATAAGG AGTTAGACATTCTATAAGGTTACTAATATATCAATTTCGGTAACAGCCAG CACACTGTCAGAATTCAACCAGATTCAACTAGGTATTTTTATAAATAAAT CTGAGTTTATAGATCCAATGAAATTCATACTGGAAGTTTTATTTTGTATT ATGTTTTGACCCTTTCAGGGTTGATATACGGAAACGGAGCTGACCAGAAT GCCGGTGAAGATAAAATTCTGTCAAAGAGGCTCATTCTTCTGCTACCAGG GAAGTTTTTGTCGACCAGGATCCTCATAGCAAACAAGACACTTGCCAAAT TTAAAGGTGTCCATTCAACCATGGCTATTTTCACAAAAGCTGTAATAAAT GAACTTGTTGACGAAGGCTTTGGGACAATACAAGAGAGAAGGGCATATAA TCATCTTCCAGTAAGTGAATTTTCATATGCAGTTTGCTTTATGAAAAACC TTGGGCCAGACTAGAGACTTTCGTATTGTTGGATATTATAAAGACACTTG GGTTTGGCATAGATTTTACATCATATTAGCTCCTCAGGGATAGCAAGTAA AACATATCAAAGGGGTTATCCTGAGAAAATTGGTTTAGTCGTTTCCATGG GTAACCAAGAGTTGGTTTTGAATTTGTTTTGACGGAAGCGAAGCGAACGA GAAAAAAATTTCGATGTAGAGCTTTGACTCAAAGTTAAGTAAAACTGAAG GTATGGGGTACTGAAACTACACGCTAAAGAGCAGATAGTAAAGAATATTT CTTCTTTTTAAGCCCTTCCGCTTCCGAGGCATCTACAAGATAGGCAGGCG CAAGGTCATAAGATAATATTGTCATTACTGGGCAATTTACTACCTTGCCG TGGAAAACGCTTCACATTTCCTAGCTAATTTCATATCTAGGAAATTCGTA CATTTTACTTTTGAAAAAAATCGAATGTCGCTTGCTAGGAATTTTATTTT TCCCCTGTGTTAAAAGTCTTAATAATTCATGTGTATTTTATTTCAGATAT TTTACATGACAAAAACAAAACCAGAGGAGGTAACACAAGAGGCATTAGAA ATTCTTGGTGTGGCAGAAGACGAGTACCGTCAGAATTATGACAAGGAAAA TGAAGAAAGGTAAGCTAAAATTCAAACTCGAAGCACTTTAAAAATTTACA ATAGAGGAACACTTGTAAGCGGAATTAATTATTAGTGGGAAAAGAAATGA AAAATGAAAACAAAATGCCCTGAAAATACTATTTTGTACGAAAATAACAA ACATGGGTAAAAAATCTAATTGGCGTACACGCTTTTTTTTTTATAAGAAT GGTGTTTTTTCATTTCATCATGGATATTCTTAACTTTTTGGCGAAAATCA TCCAAAAATATTCTTACGGTATTCTTAGGTTAAGATCGAAATTGGCAATC TACAGGTTAAAATGCATTAAAAATGGCATTCTTACGTTCAGTTGCTAAAT TCCACGATGGCGATATTCTTACCATATTCTTAATTTTTTGGCCATTTTCA TCATGGACATTCTTATAAAGTGTATTCTTATAAAAAAAAAAGCGTGTATT CATAAAACTATATTTCAAATTAGTTGTCAGTAAAATTTGAAATGCCCATA ACTTTTGTAGTGTGGTCGTGTTACAAAAATACAGGCTGATTTTAGGAAAA AATCAGATCTAGCTGAAACTTTCTCCAGGCCTTCTCTACAGGGTGCTTAT ACCTCAGGAAAAAATCCCCTGAAATCCCACTGGTGGAACATCCCCTTTTT GGGCAATTTCTATTTTCCCCAGGCGAAATCCTAAGGGCGAAATTTTTTGA AAATTTTAAACTTATTTCCAGACAATATCATATAAACCATTCAAAAGCTC TCGAAAATCTATATAGAAGACTTTTAAACGGTTAAAGCCGATTTCCTTAG CTAGCTCGAGATATTTTATGCGCAAGTTCCACTTCTCGCCACATTTTGGT CTAAAATTGGCCATATATAGCATCTTCTGCGTGAAATATCTCGAGTTAGG TAATGAAATCGGCTATACCTTTTTAAAAGTCTTCTATATAGCTTTTCGAG AACTTTCGAATGGTATACTTGATAATGTCTGAAAATGAGTTTGAAATTTT CAAAAAAATTCCGCCCTTAGGGTTTTGCCTGGGGAAAAAAGAAATGCCCC AAAAAAGGGATGTTCCACCAGTGGGATTTTAGGGGATTTTTTCCTGAGGC ATAACCATCCTATAGAGAAAGTCTGGAGAAAGTTTCAGCTAAAGTCTATT CACGATAAATGTGCACTCTTTTTGGGACCTACCCCGGTGGGGTGGAGGTC CTATAAATTAACCTTTGTCTGTTCGTCCGTTCGTTCGTTCGTTCGTTATT AGCTTTCCTCGTGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACTAAG ATGTGTAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAAAA AAATTTTTTGGCCAAAAAACGGCTAAAAAAGGGTTTTTTTGGACTTTGGG AAATATTGGATCATTGTTTTTTTTCTGATTTTTGACATGAAAGTAGGGTG CCATCATAGGTAAAAGATGGCTCAAGCAGATTTTTTCAAAAAAATTTTGT TGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCATA CATCAATGTTCTTAGCCAAATTACTCAATTTTTTGATGAAATAGATGTTT TTTTTTGCTCATGAGGGCTTACTTTTGAAGAATTGTGTGTGTTTAGACAT GAAATTTTGGTTTCTTGGCGTGTTTTTATAAAAACTGATAGAAAAATTCG ATATTTATTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCG AGATTGGCTCTTTGATTCTTTATGAATTTTTTGCACAAAGATGCATAACT ATAAACCCTCGCATGTGAAGGAGCCCGACTTTCGAAAAAAAAATTTTGCT CACAAATTTTGAATATGAAAGAATATTTCAAGAGCATGAAATTTTGGTTT CTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTGATAGATCGTCAC TATTTGTGTTCTGAATGATTGTTAATGGTCACGCTCACGTAGATATCAAT TATATATGTGTTAAATGCATAAATAGATAGGTCCATAAAAGTATCACTTG TTTCTTTTAACCTTGTAACTTTTGAAGGAATTCTTCGATCTTTATAAATA TGGTATCGTCGGAAAGAAATTAGCGAGTGGAACAATTCGAAATAAAAAAA TGATTAAAAACATTCTAAAAATGAAGATGAAAATGAAGAAGAAAAAAATG AAGATCTTTAACTATCAATTTCACTGAAATTCATCCTTTCCCATCGAACG TCATCACTGTGAAAAAATTTCTTAAAAATAATCATTCAGTCAAAAGATAT CAGACAAAGTTGTAAGCTGGTTGACGTCTAAAAACGTTGTTTTCTGCTGT TTTTTTGGGGTCAATCACTTATCAACTTTGCATTATAACTTTATATTGAA TAAATGTTTCAGTGAAATTTCTTCACAGCGATGACCTCCTAAGATAAAAG AATCTCTCCAGTGAAAATGAAAGTTTTAGCACTTTTCTGAGATTTTAATT TTTTTCTTCTTCATTTTGATCTTCGTTTTTAGAATTTTATTAAAGACTTT TTTAATTCAAATTGTTTCACTCACAAATATCTCTCCAATGATACCATAGC AATTCTATGCGCACTGAAAAGATAAACCTGAGTGGGGTTTCTTCTTTATA AGTATTGCACTTAATAAGCATATCTAGACTTAGATATGGCAAAATTTAAG CATATGCTAATCATTAGCAGGGCCTAAATTTCCGATTTTGGCTGTTTTTG GGTTGAATTTTGAGTGGGAATTTCCCTAAAAATTTGACCAGGATATAAGC ACCCTTCAAGTATCAGCTTTGTCAATCTCTCGATGTAAGCATGTCCGAGT TAGTTTTTTGATTTTTGTATGCTTATACAATATGCTTTTGCATTATCCCT ATAAAACTCTGAAAACTTTTTGAAAACTTTGATGAACAATGAAAAAAAAT TCCGGTAGAATTGTGATACCGTTTTTACAGGAATGATTCTTAAATCTTAA AAACTCGTTCCAGTGAAAAAATTTCAAAAATATTCATTCAATCAAAAGAA AAGAGATTTGACAAACTTTATTACTGATTGAGTCTAGCCTTTTTTAAAGT CAACTAGCTGTAGACTTTCTGTCATAATTCTTTTTACCTATATTTTACCA GATGTTGATTCTCTCCTTTTAAGTTTTCATGTTTATTTTCAAAATATTTC AGAGCTTTATTAATGGGATATCCCACTCTCGATCATTTATCCAATGCACA TTTATAACTGTTTATTGTCTTCTTTTGATATATCAAAAGTTTTGAGCCTT TCAGGTTTTACTGACATATAATTCAAATTCACTTTATATCAATAGTCTAA TAGCTAATCAGACATTTCAAATTTGATGCAATTCCTTTTAAATTAAAAAC TTCGTCTTCTTTTTCAGTGCTGCTCATCAAAATTGCTTCAGAAATTCACG CAACCCTCGAAAAAGAGCTGCAGAAGAGGCTCCAGCGCAAGAAGAGACTC GATCGCAAGAAGAGACTCGATCGCAAGAAGAGACTCGATCGCAAGAAGAG ACTCGATCGCAAGAAGAGACTCGATCGCAGGAGGAATCACAGCATTAGTT TAAATCTTGTAAATTGCTTATGCCACAAATTGAAGCAATGTAAATATGTA AATATGAAAAATCAGAAATGCCATTTGTCTGCAGACTGCTTCAACGCCTC GTTTTCGTGAAATCTGTAAATACTCTAATCAAAGGTCAATTGGGCAAAAT TGAAACAAAATCAAGGTCTTGATAGCTTCGATGTTACTGAAAAACTTTTC CCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068731TCONS_00068731Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068731-proteinTCONS_00068731-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_489supercontigscaffold_489:35238..41041 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.06 0.05 1.06 1.05 0.26 0.41 0.26 0.12 0.09 0.39 0 0.05 0.1 0 0 0 0 0 0 0.05 0.09 0.17 0 0 0 0