XLOC_042891 (gene) - C. hemisphaerica

Overview
NameXLOC_042891
Unique NameXLOC_042891
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_49:379212..382918+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042891 ID=XLOC_042891|Name=XLOC_042891|organism=Clytia hemisphaerica|type=gene|length=3707bp|location=Sequence derived from alignment at scaffold_49:379212..382918+ (Clytia hemisphaerica)
tttagcctgagacgtcctatctcatttacactgggtgacgaataccccat
gcaaatgctcaccccgttcatttgccaggatgtgcctgactgcctGATTG
GggcattccagaatttgtctacAACAGGTGGTGTCGGCCGACACAGGATT
TCaaagggcaaaagttttcaccaaaattcaaaatttccaaggcaagagaa
gaaaatgtatgaatttccacggcaattaaaataaaaaggcaaaaaaaaag
tggAATTTCCGACGCATTTTGCGAAggtacatggattttcatcggaattt
cAATCACGGCCAccactggagaaaaaaattatttcagaggctagaaaaaa
aataaaaaatgcacgtcgtctgACAGGGggtgacaaaaattttctggaat
ggcacATTGTGCAGAACTACTTGCCACTGAGATGTTCATTTtgcgtgaga
taaaaatttcaaagtgaaatCCGAAATCTTGGCccagttttccttttttc
caaaCATTGGGGAAatcagaaaattgaaaaaccaGGATATTGGGGaaact
accgtgagattgggtaacttgcatcagtggaagctaacatgcatagccct
caaatgaaagacttggctggtcattaaaatacaaagttaaatcaaaacaa
aaatggtagaatagAGCTGCGAGAggagctgcatagttgtattttaatga
ccagacaggtcattcatttgagggataTGCATGTGTTagcctctactgat
gcaagttacctgatctcacggtacTGTAGATTTGTCTAACCTCCACATGG
GTCTTCTTATCTTGACACCgaaaagtcaaaacaaacttttaatgaaattc
ttggtattaTTCTCATGGAAGAAGTTCATCTATCAAACAAGAGGTTCAGA
CAGTTAACATTACAAttctttcaaattaaaaaacaagCCGTGAACTGCAA
AATGAAattctgcaaaaatttctttccacAAAAAATTGGTCGTAATATTC
TCCAAAAACATACTTTAGctggattaatttttgcatgATTTGATTTCAGA
TTcacaattttttgcatttttttgcagaaataaAACTGGGTGTGGATTAG
TGTATTCATAAGAATATTCattatttaaactttttataacaaaatatttt
agtgaactgtataaacataaaaacaaaacaagatggttGCTTACTGGAGA
CAAGCTGGCTTGAACTACTTGCAATTTTCACGTCTGGCGTCACAAACATT
ACGAAAGTGCTTGAAACCTGAATTCCAAACTGAAGCTGTGATGCAAAAAC
AATCTGAATTGAAAATGATCAAATGGGAAGGTGGTAAACCAACTGGAGAG
ACCAAGTCAATTAAACTCTAAATTAAAAGACTAACTAAAATGGTTGAGTA
ggaatttttttattgtatacatcattttgaaaaagacatgactaaaaaaa
attgctgaaaatatattttagttttttttttgcattcctAAATATTCCCC
AGAAGAATCTGTTGTGCATTCATttacttaaaatttcaaaaagctcCTTG
TCAAAGTATATTTGAAGTATAGTATCTTTTAGAATTTGAACTAAGCTTTT
ATCAAACCTCCTAATATCCATTAATCTAAGGGTATCTAATGAAACTTCAG
TATAACACATTGTTTAGTATAGTCTAGTCTCTGATGAGCAaagtactttt
tttctttttttttggttttagaaAGTAAATGAAATAATTAACTTACTAGA
TTGGACCCATCCTTGAGTAGGCTGAAATATTAAAAGTCCACAATGGAAAA
CAATCTTGCTACTACAACTTTTGAGGAATGTTATTCAAGCTTTGAAGGCT
TACCCAGCAAACTCAACGAGGTTTACATCAGCAAAAGTGAACGCATCAAT
CAGTTGGTGATACTTTTCCCTGGTGATGTTCAGGTAATTGATTCAAAGTT
ACCCTAAGGGGATTAATTATGGCAAAACCtatattgacctctatgaaaga
AACGGAAATTAAAACTGCCAAATTTGCTAGAATTACGAAATTAGTTCTCC
CCACCATTAAAATTGCCTTAATATGATAAATATTGCACTTTTCAATAATC
AGGAAAATGTTTCTAGCCCTACTTGTTATAAATTGTTTTCAGTTTTGAGG
AACTATAACCCATGATCACTACCACAAAGCAAATATTTAAATCcccaggt
tttttttaatcctTTTTCGCTTTCAAGGATCACTAAGTTTCTTTACTTTC
TCACTTTGTCACAGGAATGTTATAAAGAGATGATGTTAAGACGAGATACA
AGATACAAAGAATTTTGTTACGAAAATTGTACTAAATGGTTACACCAAGT
TTTTAATGATAGTTGTATTTTCGTTGTCAAACCATCAAGAATGCACCTTC
ACACGTTTGCTTGTTATGAACACTTCTTGGACACTAACGATGTGGGTATG
CCAAACTATAAAACGGAAGATAAGCCAAAGGCATGGTTACACTTGAGAGC
GCTCCTTCAAAGTTGCACTTCGAAATGTGAGTATAGTCTGGTATAATTca
tctttttattatttcagtAGGGCCTATATCAGCCtatataaataaaaatg
ttcatttaatttgcaaaagaaccttggaataggctcttccagaaatGTTC
ATACACCCCAGGTGGAGGATATCCTTGTctggggtagcgaaaaatcatca
aaatttgacttgtctggggggtaaatttgctctgtccggggggtcaactg
atgcttgtccggggagtaaaacccgttgtccgggggctaaaagtcacttt
gtccgggggtaaatcactgaaaattgttatatcctccaccccccccccat
ataGAAATAAGTTTCATCGAAGGAAAATTGGTCACTCTGTCTTATCCTAT
CATTCTGCTGTGTGGCTTTAATTTGACTGATTTCAAACTTTATCTTAAAT
CATAGATGATGCTGACAAAACGTGGAATGACAAACCAATATCACTTGTTT
CTTTCAGTAAAGGCTGTATTGTTTTGAATCAGTTGGTTTTAGAATTGCCA
TTATTAGTTGAAACACAAAAACAGTCTCTCTTGACCAACATTCAAACGTT
TTGTTGGTTGGATGGTGGTGTACCAGGAAACAGTGGAGCGTATCCACGTA
ATGAAAAATGTATtgaacttttatcaaaatatgttcCAAACATTGAGGTT
CATACCACGCCCTATCAGATGAAAGACCCTTTACGTGTTTGGAtttcaaa
agagaaaaaacgTTTTGTACAGCTCTTGAAGAAATATAAAGCCGGATTGA
TAGACTGCTCGTATTTTGAAAATGGCGTACCAGATTTAAATATGCATTTT
AATTTAATACATAGTTTTCGTAGATAGTATATTTTGTTATATTGGGGTGA
GAATCAATATTTTAACTTGTAAATATAGTCCTTGAAAGTTAGAAACAATT
TCTGGTCATCTGTGAAACCTGATCAGACAATTAGAATATAGTTCCTGTGA
Tcacataccttaagggaagaaattttcgcggaaggaattttcgcggaatt
taatttcgcgaattggggcgtaattcgcgaaacacaccaaaattgttaaa
tcgcgaaattaaattccgcgaaattcgattttttttcttcttcttttatt
ttgttgtttttgaccaggtgttACCAAAAAAGATGGACACAATTGATTTT
TAAGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068781TCONS_00068781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068781-proteinTCONS_00068781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:379212..382918 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.53	41.12	52.87	66.44	44.45	33.93	47.67	54.55	62.1	47.1	57.56	66.4	48.12	60.55	54.51	48.45	81.21	80.5	41.31	36.32	75.09	71.08	51.09	48.6	51.21	49.26	61.36	57.94	37.38	33.59