XLOC_043103 (gene) - C. hemisphaerica

Overview
NameXLOC_043103
Unique NameXLOC_043103
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_495:21833..30877+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043103 ID=XLOC_043103|Name=XLOC_043103|organism=Clytia hemisphaerica|type=gene|length=9045bp|location=Sequence derived from alignment at scaffold_495:21833..30877+ (Clytia hemisphaerica)
ttttgataGTCTAATTTGTATTGATTcagggaaaaaagaaaattttgtac aatattgtaaattttaagaagaaaattatttatactactatttaaaaata caattgaacaaagaaaaattgGCATTTAATAACATATTCTGGAAGCATGG CAACTAAAATTATCGATGTCAATAATCCCAGTGGGGGTTCACAAAGTGCA ACAACATGTCCATGGGGGAAGATTCAAAACACCCCTCCAGCTAGTTCATT CTCATCTTTAATGGATGAAGAATATGCGAAGGAGCTTGAAAGTGAAGAAT TGAAATCTTTAAGCCAAGAACAAGATCCAGTCCAAACAGAAACACAAGGT CAGTGacataatttaatttttctcaacTTTTGGTCTTTTGGCCTGGGCAT GATTCTTCTTCTCGAAATAAGGTTAAAACTTTGGCAGACTGGAGATTTCA AATTTGCGaaattgactgaaatttggcacacttattCTTCCTTTGGTCAA TGAATACCTAGTAGCctggtgttttttttcttttttttttaatttttgat attttcaggCCTGGGCATGAGTTTTACGCCAAAATGAGGCTTATGTTAGC CGTCTGGACTTTCACGGGCCAGCCAGTCAGTCAGCacgggcgacagtttt tttttctaattttaagaGTATTTAGTCTTTCTTTGACAGAattgaattat tgaaaattattcTTAAAGGAGAATTAATGTTTGAGATTTGGCATTCCATT TTTTTGCCTGGACAGGAAGAAGATCAAAAATGGagtttaataaaaaaaga actaattaaaaatcttgtttatttacttgattATTTAGCTTCAAATAAAG ATTGCTCTTTTTAGGCTCTAAGAAGGAGAAAATTACACCCTCCCTATATT TTGTGACGTAGGTTGCAAGGATGAATAAAcataatgttttaaaaatctGC AGTAGTAAAAAAGGGAAGAAGCTTGAAAGGAGTTTTACATGAATGTTATA TCATTAGAATACTCGTCAGAGCTACTGTTTGTAGACGAAGAATCACTGGT TGCTCTCTTTcatttctctctcttttttgaAAGTCTAACAACCACTTACG CGCATCATACGTCACAAATTTTGTTGCCATGGTTATATAAGGGAATTTTT ATTCTATTATTCGGTATAGAAAAAGTAAACAACTATGAATTATATATTCT TGGAATCGTGTTAATGAGCTCTTTAAGAATATAATCataagtttcattga aaatcacACATATTAATTCCTCTTTAATAACANTAAAACTTTGACAGCCT GGAGATTTGCGaaattgactgaaatttggcacacttattCTTCCTTGGGT CAATGAATACCTAGTAGCCtggtgtttttttgtttttttttaatttttga tattttcaggCCTGGGCATGAGTTTTACGCCAAAATGAGGCTCCTGTTAG CCGTCTGGTCTTTTACGGGCCAGCCAGTCAGTCAGCACGTACgacagttt ttttttctaatttaaagaGTATTTAGTCTTTCTTTGACAGAattgaatta ttgaaaattattcTTAATAACACTTATTTTCAAATTCTAGTTGTAATACC ACCTGAAGCTGCCACTAATGGATCTGATGACACCGCTAATGATTTGTTAT TAGCACAAATGTTACAATTAGAATTTAACAAAGAAAATGATGCATATGTC AAATCATTAGAAAAGACTTATAATGGAACAAGTAAAGGTTTGTGCTGTTG TTATTATTGTAGCgtctttaaaatcaattcaaCGTTTGATTGCATTAGCT ACatatttaaaaatctaaaaaaatttttttgctgatatatatgaagaaaa taagaatttctgtccaactatattcactcaggagattggggtggcagagc agcatatgcgttttggtccttattaggactcgtcatcACTGCATCTGCAT ACTGCACACTGGCTGGCCAGATCGATTTAGCCAGCATCTCTAAACCACAA AACCACTTACAGAATATAGAGGATAATTTAATACGAAACGTATAAGTAAA AAATGAACCACTGAAGCTTCTGTCAAACgaaaattttgctgaaatttgga ccaaatgtttcatcacacaagaaaataagaccctaaaaatcatgaactct ggtggggaaGCAGATTTCTAAACcacaaaatcacttgtggttcaaaCTAA GAGAAATACTGGACATAAGGGAAATTCCCTACAGAAGGGAAATTCCCTAC AGAATATATAGGATAATTTAATTCTCTTTGAGGACCGAAACGTATATGTA AAAAATGGACAACTTTTTTTTGGTTAATTAAACAGTGTCAATGTCATTCA AGAATTTCCAGTCAGTTCACCCATACGAGGCTGATTCATCACGTAAATTA TATGGCAAAGATGATTTTGACGATGACAGTAGCGAGGAGGACTCTGATCT CGATGATGCTATTAGTAAGTTCACTCAATTTTTTCGAGAAACCTATCTTG GCTCCTTTAAAATTCCACTCTAGCCCCTTCAAAGATTGAAAGTCTTCAGC TTATCACTTCCTTTTGTGTCTTGTGCATattccttttgttttttatttta tacttCCAAAATGTATATTGGGTTTTTATTACAGATTGTAATGGTTAGTC GCtagtttgtattttcttcagtgcaTATAACTTCACTATATACTCTAGCC CCTTCAGAGATTGAAACTCAATGGAACTACCTCATTTTGTCATCTCTCAT TCACAAAGCCTTtaagaaatattattttggggtattttttctCCATCATA GATGAAAGGAAAGCAGACGGTGAAATCATTACAAAACATGATCAACAAAT TTCTGAAAGGAAGAATGCCAAAAATGTAGAACAGGTATAAAGGAAGAAGA AGTCCACATGCTTGATTATTGATAAGATATTGGGCAgtttcattaaattt ccatactaAAAGGGGtggacaaaccttttcaaggcaaaaaaagattctta gGAATGTGTGGATGCCCAAAAAAATACccctggaaaattgcaaaatttgc agaacccttggaaaattcttttcatacctttaaAGTGAGGATGGACGAAA AGTCTTTTAACCCATGGAAATTTTTGAATAACCATTATACCCtctgacaa atgaaaaaataatcccctggaaattcttctccgaTTACAAATTATTCGTC CACCCCTCTATGGGGTACggttataaaatggaatgacaTATTTCAATACA TAGCTCAATTAGGACAAAATCGATGTTGACAAATTTTCGCAGTATCCTGC TAAACCATACCAGACCTATTACAGAAATAACAATGTTATTTTTTACTTCC TTAAGATAACATCCTCATCTATTAACCGAGTTGCAGACCTTGGTAGACCC TGGGCAAATTGTAAATAAAATATCAAGTTTTCACAGTTCTTTGTATTTTA CAACAACAAGTTTTCTTGACGCGGCAGATTAGATTGCTGATTTTTGTAGC ATTTTTACAGCagcattgggcttttccagaaaaaaaaattacacccactg ttgattgatttttagaagtatcgaaccccctggatatcctactttattag taaagaccccatAGATATCAGCTCTTAAAAATAtactcaaccccctggat atcctctcttataaagatgcttacccttggatatcgtattttttcaCTCG AAAtgcactttaccccctggatatccgctcccttgtagatatttaacccc ctggatatccacttttgaacttTATTTCCCAATTTCCTTTGCAAAAGGGG ACGTTTTTTTACCTCCAGAACCTCCCATTCAATGaagttcattttcttta ttttgtttaagCTAATCCAccatgtcgacatccctcttctaaatCCGACA CCCTTCTTCAGAGGTAAGATaagaaggtcggaatcactgatagacaaaaa aTTTTCCTAACTAATCGCTAAGCAAATAAATATAATTTCCATCAACGATT CCGGCCGTCTTATTATTCCCAACTCTTGGTGTCCaaggtgtcggaattag aagagagATGTCGACATTAAGCCAACTTAGAGTGTTAAGAGCGGAATTCC CAGACCAGATATTCAATGGAGTTTATTTAGTTTTCTTTACGCATCAAGCT AACCCACTTTTATAatgattattttatttatactaGTTTCCACTCCACTT TGCTTCTGGAGATGTTGGCAGAAAGGATATTCGCCTACCAAATGCTGTTT ACAACCGATTGAAAACACATTCAAAAAAGGAGGAACGGAACCACATGAGA ATACATGAAAAACAAGAACATTCAACACACGTaagaataaaaataattat cttaaaagagaactaattttcgtatggtcgaaaaaaattccattgatttt tgatggaaaatggccaaaatttgtAATTCGTTGGTTCTGATTTTTGGGGT TTTGCCGAATAAACgcaaaagaaagcaaaaatttagTTCCTTTTCTAAGT AGATCTTagaagaactaattttcgctaTCTAACCAGAACTAGTTAGATAC TTTCTTTTGCGAGGCTCTTTGAAGCTTTTAGCGCGGACATTTCAGATATt gtgtaaaattattttaacaaATGTGTAGCttgcttagattgggtaatgcT GGGTGCTACGAATAGATGTGGCACTCCATCTCAACATTTTACCTCCCAGA TCTATCGCCAATAGAAAAAGGGAAAGACTCTCTCACTTCCGGCTCCACGA TCCGACAGGTCCATGAGATGAAAATACTTACTACAgtggacgctctctaa ttcgacgttctactatattcgataagctcccgttttcgatcaaattgaaa gtcaccgtcaaatttccttaagaaactctcataaactacgctctactatt cgacatcctattattcgataagctcccgttttcgatgaaaatttgaagtc cctTGAAGGTTtttcgctctcttattcgatttctaGCGTGTAAAAAGGCC TTTAGGACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT CGCGTTCAAACCAATCGAGTCTcgcttatatttttctttctcagcTCTAT AATTCGATATTTACCTCGTGTTTATCGGATTAGGGAGACTTCCTACTATT CGACACGCTCccgtattcgatgaaaatccgattccccttgaaaatcgaat tagggagcgtcaactgtaatttaTTTCTGTGAATTCTGTTCTTCCGTTCT CTTTTCCAGGAAAAAGCTTTAGATGAGAAATCTCGTTTGATCTTGTATAA GATGGTAAACAACGGGACACTTGATAGCATCAGTGGTATTGTCAGTACAG GCAAAGAGGCTGTTGTTATACACGCTAGAGGAGGACAGTAAGTACTCTCT CTAAATAGAATGGATTTTTAGGTTCGTTTAaaagccggtctccacttgcg cgcgcttcgatcacGTTTTATCTGGCAAAGCTTCcatgctattggtcaaa agaaaaatgaagcaattccattggcgtgatctgacgtaacggttgaaaaa agttgaaatgtattgaactttttttttcaagcgcgagcttcatttttatg acgtaatcttttttccaagcaaaattgATTGAAGCCAAacagtgcgatcg cagcgcgtgTGTGGATACCGGCTTTAAGTGACATTATTTTGAGTCATAAt cattgtttaaatttttcaaaagatccACAATACCAAAAATTGATCATGAG ACGCTCTATAATTTGAATTGTGTCGTTCATGAGAGTTTCTAGTTGGCGAT GGCTTtgaatattatcgaataattgaGCGTTTCGAAATAATAAAACTTGG ATATTGAGAGCATCAATATAAGACGATATAATATAAGACAATCTTTTCTA CTGTTTTCTTGTTCATCTTTCAACAGGTCTGAAAATGGTCCACTTCCATC AGAGTGTGCtttgaagattttcaaaacGACATTGAACGAATTCAAAACTA GAGAGAAATATATCAAGGATGATCACAGGTTTCGTGACCGCTACTCTAAA CAAAACCCAAGGAAGATTATCAAATTGTGGGCTGAAAAGGAGTTCAGAAA TCTCAACAGGTATGTTCCATGTTAgcctgtacacgttttttagaacaaac tttataaaaatatgAGGCTTCACAACaagttttaaggctttttaggTTCT AAAACACCTTTTTTATTAGGAAAATAGAcgaaaatactcaaaatttgctg aaaataagaacatgttaaaaacatttttaagcttgaaatccgaaaagtta agaacatttaaaattcTGAAGGTTGGTGTTATTTTTCAACGGAGAAGAGT TTgttagtttcatttttcattgagGATTCATTTGAATGGACTTGAAAAGT TTGTTACAGGcaagtttaaagtgttatttttACTGTGTGGGATTCATTCG AATTCAAATTGGTCTCaaccttttcattttcatctgaACTGCTCCACTCT TTCGCCCCAAAACATCGATTGTTCACAGTTTTAAACGGAAAATGTTATAT GGTTAAAAAACTATCATCACTCGTCAATGTTTCAGATATTATTATAGAGA TTGAATGAAGTAACATGAAAAAATTTCCCTATAGCACTTTGCTTTTTGCA ATGGAGCATTAAATATGTTCCCTCTGTAGTTATCTTCTTATTAGCTACCA ATACCGTTTGAAAACCAGAAGATCCTCCGAGCTTTGAATTCACAACCATA CCATTGGGGAGAAATATCTTTATCCGTTGCGAATCAAAATCATAttctcg atttttttcttccgtTAATTTTCAATGGTTCAGGTGACTAGTCTCAACAC CAGTGTGTTTATatttgtacatttttattttgtatcatactTGTAGAATG CAGGAAGCCGGTATCCCATGTCCAAAAGTTGTTTGCTTACGTAAGCATAT TCTTGTAATGACTTTTGTTGGAGCAGACCAAAAACCGGCACCAAAATTAA AAGATGCAATATTATCGAGAAGGGAATTAGAATCAGCTTACAGTCAGTGT ACAGAAGTAAGAATTTCTTGGCTTGATCTCATTTACACGTTAACAACCAA AGAAGTGATCTTAAAGGCCATGAGACGCCCTGGATAACTTTGAAACATTG GCATCGCGTCTTGTTATCCTTAACTCATATTTTTATACATTGTATCACTA CGATCTCGATTTCTTCTTCTTATAGTATAGGAAATACTTTTTTTCCCATC ATATAAATCGGCTTTCCCAAAATAAAATAGGGCTCTTCCGtctaaaaaca aaatgttaaaaaaccaTTAAACAAATGAAAAGTTCAAATAATAAGTTAAA TTTtagaattatgaaaaatttaatttcctaGGAGACATTGATAGATCAGG GGCTGAAGTACAGCTTGCTCTCgcttaccttatcggccaaaacttagtcg gccctaagtgactaaattttggcttggtgactaaaattagggctgaCCTG GgctgactaaaaatttgggccgactaaaatttagACCGactaaaaaatta gaaatggccaaaatttaGTTATTAGttggcccttagtgactaaattttga cgaggtgactaaaatattagggccgactaataattaaggccgactaaaat taaagccgactaaaattaaggtcgactcagttttggccgataaggtatcc gAACTCAAACGGTAAAAAAATATTCCATTCCTTTTACAGATGATGAAGAC GATGTATAACGAATGCAAGCTGATTCATTCTGATCTCAGCGAATACAACA TTCTATGGCATTAcaataaatgttttttcattGATGTTTCACAATCTATA GAACCTGTCCATCCACAAGCATTTCATTTCCTACTTCGAGATTGTCACAA TATAACCAGTTTCTTCACCAAAGCTGGATTGACCACAGATATTGTGATGA AGGAAGAAGAATTGTTTAAATATGTTTGTGGCAAAGAATTGGGCGAAACT TGTCTTGATCAAATTGAAAACGAGGTAAATactttttaagtcttttttaa taaGATCAAACCATATAAGAtcaaaccatataagaacataaggcttcgat gatggccaaagtattaagaacaagttgagaacatttaaaGGTTAACCTTG AAATTCAGAAAGTTAGGAACATTGAGAggtttcaaaatttaagaatgTAT ATAATATTAGTGTGATTTGGTTGCCCAATTCCAGGGCATaatctttaatt ttcaaatgttgaCTTTACTTGTGACATTATACCTTAGCCAACAATATTAT CACTCTTTCACTTTCTCCTCGCagcaaaaaccaaatttcgagcGGGACGA AGAAATGCTAGCGTTTGGTTTGAACTCTGATGCTAATTTCGATTATCAAT TCaaattcaaccaatcaaaactcGATCAAGCAAAACATAACCAATCAGAA GAGAGTACGGCCGACCAATCAGCTGACAGTAAAGTGAATGAACTAGCAGA TATGTCAGAATCAATATCTACGAGTGAAAATTAATTCTTCTCCTTCgtaa attttaacttttctatTTCAAAGTTCAGGATGGTCtaaaaaataaagcaa actAATTTATtaaggtaatcaaattttttgcgAGAATTAATATTGGcata aaattgccaaaattactttttgtcaaaatcaaaaatacctCCTCGTCAAA TAACTTATTGCTAAACACTATTgcattttctttgtatttttcaaaaatgt tcccTAAAATTTTTCCATATCTTTCGGGGAAAAACTTTTCATCTTCTCTT CGCTAGAAATGACCATCCCAGCCAGACAATCTTTTTCCAcgtttaatttg aatttttatgactTCACTTTTTAAGAGGAATAATTTATAGAAGTCAATAA TGTTGTTATTTTGTAGCTATTTAGTTTGAATAATCTATTTTTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069151TCONS_00069151Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069151-proteinTCONS_00069151-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_495supercontigscaffold_495:21833..30877 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RIOK3serine/threonine-protein kinase RIO3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.27 32.27 6.05 2.65 74.34 56.66 58.94 66.43 67.05 66.87 67.42 43.99 36.98 39.31 17.85 24.27 21.08 21.43 16.83 25.49 18.14 15.31 40.01 37.44 47.05 41.71 33.08 31.6 35.75 33.72